Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC5.68□□□□□ -1.5
LTBQ06643 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC5.68□□□□□ -1.5
LTBQ06643 RNA5SP77-201ENST00000365394 120 ntBASIC5.68□□□□□ -1.5
LTBQ06643 RNU11-6P-201ENST00000391127 133 ntBASIC5.68□□□□□ -1.5
LTBQ06643 SNORA17A-201ENST00000391185 133 ntBASIC5.68□□□□□ -1.5
LTBQ06643 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC5.68□□□□□ -1.5
LTBQ06643 MTND4P11-201ENST00000417020 1058 ntBASIC5.68□□□□□ -1.5
LTBQ06643 RPS3P2-201ENST00000421346 701 ntBASIC5.68□□□□□ -1.5
LTBQ06643 AC007562.1-201ENST00000421819 517 ntBASIC5.68□□□□□ -1.5
LTBQ06643 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC5.68□□□□□ -1.5
LTBQ06643 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC5.68□□□□□ -1.5
LTBQ06643 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC5.68□□□□□ -1.5
LTBQ06643 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
LTBQ06643 AL158053.1-201ENST00000441503 453 ntBASIC5.68□□□□□ -1.5
LTBQ06643 OR13K1P-201ENST00000444577 975 ntBASIC5.68□□□□□ -1.5
LTBQ06643 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC5.68□□□□□ -1.5
LTBQ06643 AC023274.2-201ENST00000445264 521 ntBASIC5.68□□□□□ -1.5
LTBQ06643 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC5.68□□□□□ -1.5
LTBQ06643 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC5.68□□□□□ -1.5
LTBQ06643 AL022319.1-201ENST00000458183 1167 ntBASIC5.68□□□□□ -1.5
LTBQ06643 RN7SL643P-201ENST00000471845 291 ntBASIC5.68□□□□□ -1.5
LTBQ06643 AC015908.1-201ENST00000478739 476 ntBASIC5.68□□□□□ -1.5
LTBQ06643 GM2AP2-201ENST00000491764 562 ntBASIC5.68□□□□□ -1.5
LTBQ06643 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC5.68□□□□□ -1.5
LTBQ06643 AC108043.1-201ENST00000512696 574 ntBASIC5.68□□□□□ -1.5
LTBQ06643 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC5.68□□□□□ -1.5
LTBQ06643 IGHVIII-67-4-201ENST00000524281 296 ntBASIC5.68□□□□□ -1.5
LTBQ06643 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC5.68□□□□□ -1.5
LTBQ06643 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC5.68□□□□□ -1.5
LTBQ06643 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC5.68□□□□□ -1.5
LTBQ06643 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC5.68□□□□□ -1.5
LTBQ06643 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
LTBQ06643 AC027229.1-201ENST00000583887 253 ntBASIC5.68□□□□□ -1.5
LTBQ06643 NPIPB1P-202ENST00000588786 828 ntBASIC5.68□□□□□ -1.5
LTBQ06643 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC5.68□□□□□ -1.5
LTBQ06643 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC5.68□□□□□ -1.5
LTBQ06643 AC124916.2-201ENST00000604416 224 ntBASIC5.68□□□□□ -1.5
LTBQ06643 AC108865.2-201ENST00000606881 432 ntBASIC5.68□□□□□ -1.5
LTBQ06643 AL021368.3-201ENST00000607119 578 ntBASIC5.68□□□□□ -1.5
LTBQ06643 AC006924.1-201ENST00000610750 559 ntBASIC5.68□□□□□ -1.5
LTBQ06643 AC009269.6-201ENST00000621778 588 ntBASIC5.68□□□□□ -1.5
LTBQ06643 DRG1-207ENST00000629688 309 ntTSL 5 BASIC5.68□□□□□ -1.5
LTBQ06643 SNORA17.5-201ENST00000630429 132 ntBASIC5.68□□□□□ -1.5
LTBQ06643 AC092692.1-201ENST00000623625 2595 ntBASIC5.68□□□□□ -1.5
LTBQ06643 CR383656.5-201ENST00000547616 1340 ntBASIC5.68□□□□□ -1.5
LTBQ06643 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC5.68□□□□□ -1.5
LTBQ06643 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC5.68□□□□□ -1.5
LTBQ06643 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
LTBQ06643 AP001541.1-201ENST00000623322 1904 ntBASIC5.68□□□□□ -1.5
LTBQ06643 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
LTBQ06643 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
LTBQ06643 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
LTBQ06643 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC5.67□□□□□ -1.5
LTBQ06643 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
LTBQ06643 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC5.67□□□□□ -1.5
LTBQ06643 CREM-203ENST00000344351 1625 ntTSL 2 BASIC5.67□□□□□ -1.5
LTBQ06643 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
LTBQ06643 AL359976.1-201ENST00000418655 3528 ntBASIC5.67□□□□□ -1.5
LTBQ06643 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC5.67□□□□□ -1.5
LTBQ06643 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
LTBQ06643 MIR433-201ENST00000384837 93 ntBASIC5.67□□□□□ -1.5
LTBQ06643 MIR188-201ENST00000385034 86 ntBASIC5.67□□□□□ -1.5
LTBQ06643 AL031985.1-201ENST00000392713 418 ntBASIC5.67□□□□□ -1.5
LTBQ06643 AL445238.1-204ENST00000400311 463 ntBASIC5.67□□□□□ -1.5
LTBQ06643 RPL21P50-201ENST00000417698 477 ntBASIC5.67□□□□□ -1.5
LTBQ06643 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC5.67□□□□□ -1.5
LTBQ06643 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC5.67□□□□□ -1.5
LTBQ06643 MARK2P12-201ENST00000420129 585 ntBASIC5.67□□□□□ -1.5
LTBQ06643 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC5.67□□□□□ -1.5
LTBQ06643 ZFAND6P1-201ENST00000434138 605 ntBASIC5.67□□□□□ -1.5
LTBQ06643 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC5.67□□□□□ -1.5
LTBQ06643 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC5.67□□□□□ -1.5
LTBQ06643 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
LTBQ06643 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC5.67□□□□□ -1.5
LTBQ06643 RN7SL254P-201ENST00000460609 284 ntBASIC5.67□□□□□ -1.5
LTBQ06643 RN7SL39P-201ENST00000462264 297 ntBASIC5.67□□□□□ -1.5
LTBQ06643 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
LTBQ06643 RN7SL714P-201ENST00000487050 298 ntBASIC5.67□□□□□ -1.5
LTBQ06643 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC5.67□□□□□ -1.5
LTBQ06643 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC5.67□□□□□ -1.5
LTBQ06643 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
LTBQ06643 AC110760.3-202ENST00000515177 371 ntBASIC5.67□□□□□ -1.5
LTBQ06643 AC135983.3-201ENST00000528049 1226 ntBASIC5.67□□□□□ -1.5
LTBQ06643 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC5.67□□□□□ -1.5
LTBQ06643 ASB8-203ENST00000535988 679 ntTSL 2 BASIC5.67□□□□□ -1.5
LTBQ06643 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC5.67□□□□□ -1.5
LTBQ06643 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC5.67□□□□□ -1.5
LTBQ06643 AC090022.1-201ENST00000546569 311 ntBASIC5.67□□□□□ -1.5
LTBQ06643 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC5.67□□□□□ -1.5
LTBQ06643 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
LTBQ06643 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC5.67□□□□□ -1.5
LTBQ06643 AC015802.5-201ENST00000607478 399 ntBASIC5.67□□□□□ -1.5
LTBQ06643 AC097520.1-201ENST00000624435 385 ntBASIC5.67□□□□□ -1.5
LTBQ06643 AC103703.1-201ENST00000634783 663 ntBASIC5.67□□□□□ -1.5
LTBQ06643 OR7E91P-202ENST00000642062 1198 ntBASIC5.67□□□□□ -1.5
LTBQ06643 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC5.67□□□□□ -1.5
LTBQ06643 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC5.67□□□□□ -1.5
LTBQ06643 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
LTBQ06643 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
LTBQ06643 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 217.3 ms