Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
CCL20P78556 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CCL20P78556 OR5AQ1P-203ENST00000641818 1529 ntBASIC4.5□□□□□ -1.69
CCL20P78556 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
CCL20P78556 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CCL20P78556 AC079097.1-201ENST00000512187 1399 ntBASIC4.5□□□□□ -1.69
CCL20P78556 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC4.5□□□□□ -1.69
CCL20P78556 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CCL20P78556 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
CCL20P78556 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC4.5□□□□□ -1.69
CCL20P78556 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CCL20P78556 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CCL20P78556 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC4.49□□□□□ -1.69
CCL20P78556 AL132656.3-201ENST00000606384 1595 ntBASIC4.49□□□□□ -1.69
CCL20P78556 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
CCL20P78556 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CCL20P78556 AC025574.1-201ENST00000554784 1653 ntBASIC4.49□□□□□ -1.69
CCL20P78556 AC027088.4-201ENST00000611559 1947 ntBASIC4.49□□□□□ -1.69
CCL20P78556 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CCL20P78556 OR9K1P-201ENST00000326513 941 ntBASIC4.49□□□□□ -1.69
CCL20P78556 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CCL20P78556 AL121886.1-201ENST00000358609 435 ntBASIC4.49□□□□□ -1.69
CCL20P78556 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CCL20P78556 RNA5SP308-201ENST00000362532 115 ntBASIC4.49□□□□□ -1.69
CCL20P78556 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC4.49□□□□□ -1.69
CCL20P78556 LINC01353-201ENST00000412772 775 ntTSL 3 BASIC4.49□□□□□ -1.69
CCL20P78556 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC4.49□□□□□ -1.69
CCL20P78556 AC017078.1-201ENST00000416146 368 ntBASIC4.49□□□□□ -1.69
CCL20P78556 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC4.49□□□□□ -1.69
CCL20P78556 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC4.49□□□□□ -1.69
CCL20P78556 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC4.49□□□□□ -1.69
CCL20P78556 RPS21P1-201ENST00000434479 247 ntBASIC4.49□□□□□ -1.69
CCL20P78556 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC4.49□□□□□ -1.69
CCL20P78556 RPS7P3-201ENST00000443360 580 ntBASIC4.49□□□□□ -1.69
CCL20P78556 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC4.49□□□□□ -1.69
CCL20P78556 MEMO1P4-201ENST00000453590 386 ntBASIC4.49□□□□□ -1.69
CCL20P78556 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC4.49□□□□□ -1.69
CCL20P78556 MYL12BP2-201ENST00000503948 512 ntBASIC4.49□□□□□ -1.69
CCL20P78556 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC4.49□□□□□ -1.69
CCL20P78556 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC4.49□□□□□ -1.69
CCL20P78556 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CCL20P78556 RNU6-513P-201ENST00000516104 104 ntBASIC4.49□□□□□ -1.69
CCL20P78556 RN7SKP64-201ENST00000517206 328 ntBASIC4.49□□□□□ -1.69
CCL20P78556 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CCL20P78556 RAD21-204ENST00000518055 896 ntTSL 2 BASIC4.49□□□□□ -1.69
CCL20P78556 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC4.49□□□□□ -1.69
CCL20P78556 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC4.49□□□□□ -1.69
CCL20P78556 AC044839.3-201ENST00000532068 860 ntTSL 3 BASIC4.49□□□□□ -1.69
CCL20P78556 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC4.49□□□□□ -1.69
CCL20P78556 AC139697.1-201ENST00000548429 745 ntBASIC4.49□□□□□ -1.69
CCL20P78556 LINC01146-203ENST00000555996 459 ntTSL 2 BASIC4.49□□□□□ -1.69
CCL20P78556 AC025040.1-201ENST00000560375 1284 ntTSL 2 BASIC4.49□□□□□ -1.69
CCL20P78556 AC092131.1-201ENST00000564046 548 ntTSL 4 BASIC4.49□□□□□ -1.69
CCL20P78556 GARSP1-201ENST00000570895 719 ntBASIC4.49□□□□□ -1.69
CCL20P78556 AC127024.5-201ENST00000580085 462 ntBASIC4.49□□□□□ -1.69
CCL20P78556 AC012254.2-203ENST00000588705 561 ntAPPRIS P5 TSL 2 BASIC4.49□□□□□ -1.69
CCL20P78556 AC010139.1-201ENST00000596963 445 ntTSL 5 BASIC4.49□□□□□ -1.69
CCL20P78556 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC4.49□□□□□ -1.69
CCL20P78556 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC4.49□□□□□ -1.69
CCL20P78556 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC4.49□□□□□ -1.69
CCL20P78556 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC4.49□□□□□ -1.69
CCL20P78556 AC241377.1-201ENST00000619797 406 ntBASIC4.49□□□□□ -1.69
CCL20P78556 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CCL20P78556 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC4.49□□□□□ -1.69
CCL20P78556 AC114947.2-201ENST00000565748 2125 ntBASIC4.49□□□□□ -1.69
CCL20P78556 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
CCL20P78556 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC4.49□□□□□ -1.69
CCL20P78556 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC4.49□□□□□ -1.69
CCL20P78556 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
CCL20P78556 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.49□□□□□ -1.69
CCL20P78556 ANTXR2-204ENST00000404191 1469 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CCL20P78556 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC4.49□□□□□ -1.69
CCL20P78556 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CCL20P78556 OR4F13P-202ENST00000560066 2054 ntBASIC4.49□□□□□ -1.69
CCL20P78556 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC4.48□□□□□ -1.69
CCL20P78556 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC4.48□□□□□ -1.69
CCL20P78556 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CCL20P78556 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.48□□□□□ -1.69
CCL20P78556 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC4.48□□□□□ -1.69
CCL20P78556 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC4.48□□□□□ -1.69
CCL20P78556 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
CCL20P78556 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CCL20P78556 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
CCL20P78556 C14orf177-201ENST00000325812 1284 ntAPPRIS P2 TSL 2 BASIC4.48□□□□□ -1.69
CCL20P78556 FCGR1B-202ENST00000369383 570 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CCL20P78556 PAGE2-201ENST00000374965 456 ntTSL 2 BASIC4.48□□□□□ -1.69
CCL20P78556 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CCL20P78556 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
CCL20P78556 AC003045.1-201ENST00000398779 713 ntBASIC4.48□□□□□ -1.69
CCL20P78556 AL035467.1-201ENST00000403583 686 ntBASIC4.48□□□□□ -1.69
CCL20P78556 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC4.48□□□□□ -1.69
CCL20P78556 MTND2P12-201ENST00000417560 1252 ntBASIC4.48□□□□□ -1.69
CCL20P78556 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC4.48□□□□□ -1.69
CCL20P78556 AL590095.1-201ENST00000420049 436 ntTSL 3 BASIC4.48□□□□□ -1.69
CCL20P78556 CDC42P6-201ENST00000421246 576 ntBASIC4.48□□□□□ -1.69
CCL20P78556 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC4.48□□□□□ -1.69
CCL20P78556 ATP5LP4-201ENST00000434169 307 ntBASIC4.48□□□□□ -1.69
CCL20P78556 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC4.48□□□□□ -1.69
CCL20P78556 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC4.48□□□□□ -1.69
CCL20P78556 PCBP2P1-201ENST00000437262 977 ntBASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 158.6 ms