Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 AC073594.1-201ENST00000462065 364 ntBASIC7.28□□□□□ -1.24
RHBDL3P58872 AC092865.4-201ENST00000477936 615 ntBASIC7.28□□□□□ -1.24
RHBDL3P58872 PPIAP19-201ENST00000486414 492 ntBASIC7.28□□□□□ -1.24
RHBDL3P58872 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC7.28□□□□□ -1.24
RHBDL3P58872 RNU6-760P-201ENST00000516078 97 ntBASIC7.28□□□□□ -1.24
RHBDL3P58872 KCTD9P4-201ENST00000526766 1166 ntBASIC7.28□□□□□ -1.24
RHBDL3P58872 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
RHBDL3P58872 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC7.28□□□□□ -1.24
RHBDL3P58872 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC7.28□□□□□ -1.24
RHBDL3P58872 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC7.28□□□□□ -1.24
RHBDL3P58872 MTND2P13-201ENST00000577438 1039 ntBASIC7.28□□□□□ -1.24
RHBDL3P58872 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC7.28□□□□□ -1.24
RHBDL3P58872 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC7.28□□□□□ -1.24
RHBDL3P58872 PLEKHA3P1-201ENST00000598554 894 ntBASIC7.28□□□□□ -1.24
RHBDL3P58872 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC7.28□□□□□ -1.24
RHBDL3P58872 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC7.28□□□□□ -1.24
RHBDL3P58872 AL159169.2-201ENST00000610061 1269 ntBASIC7.28□□□□□ -1.24
RHBDL3P58872 AP005431.1-201ENST00000618479 319 ntBASIC7.28□□□□□ -1.24
RHBDL3P58872 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
RHBDL3P58872 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
RHBDL3P58872 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC7.28□□□□□ -1.24
RHBDL3P58872 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
RHBDL3P58872 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
RHBDL3P58872 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
RHBDL3P58872 TMTC2-204ENST00000549919 6211 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
RHBDL3P58872 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
RHBDL3P58872 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC7.27□□□□□ -1.24
RHBDL3P58872 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC7.27□□□□□ -1.24
RHBDL3P58872 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC7.27□□□□□ -1.25
RHBDL3P58872 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC7.27□□□□□ -1.25
RHBDL3P58872 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC7.27□□□□□ -1.25
RHBDL3P58872 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC7.27□□□□□ -1.25
RHBDL3P58872 RNU105B-201ENST00000364478 208 ntBASIC7.27□□□□□ -1.25
RHBDL3P58872 AL121977.1-201ENST00000401636 979 ntBASIC7.27□□□□□ -1.25
RHBDL3P58872 AMZ2P2-201ENST00000406819 1057 ntBASIC7.27□□□□□ -1.25
RHBDL3P58872 RN7SKP206-201ENST00000410823 293 ntBASIC7.27□□□□□ -1.25
RHBDL3P58872 RNU2-22P-201ENST00000411266 212 ntBASIC7.27□□□□□ -1.25
RHBDL3P58872 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC7.27□□□□□ -1.25
RHBDL3P58872 DPPA2P2-201ENST00000418220 897 ntBASIC7.27□□□□□ -1.25
RHBDL3P58872 RPS7P8-201ENST00000418311 581 ntBASIC7.27□□□□□ -1.25
RHBDL3P58872 GLUD1P9-201ENST00000420997 1173 ntBASIC7.27□□□□□ -1.25
RHBDL3P58872 AL669831.5-205ENST00000429505 441 ntTSL 3 BASIC7.27□□□□□ -1.25
RHBDL3P58872 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC7.27□□□□□ -1.25
RHBDL3P58872 RN7SL273P-201ENST00000481561 299 ntBASIC7.27□□□□□ -1.25
RHBDL3P58872 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC7.27□□□□□ -1.25
RHBDL3P58872 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
RHBDL3P58872 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC7.27□□□□□ -1.25
RHBDL3P58872 IGHV1-14-201ENST00000523391 241 ntBASIC7.27□□□□□ -1.25
RHBDL3P58872 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC7.27□□□□□ -1.25
RHBDL3P58872 AP000648.1-201ENST00000529682 397 ntBASIC7.27□□□□□ -1.25
RHBDL3P58872 OR6M2P-201ENST00000529831 871 ntBASIC7.27□□□□□ -1.25
RHBDL3P58872 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC7.27□□□□□ -1.25
RHBDL3P58872 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC7.27□□□□□ -1.25
RHBDL3P58872 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC7.27□□□□□ -1.25
RHBDL3P58872 SNORD39.2-201ENST00000579995 76 ntBASIC7.27□□□□□ -1.25
RHBDL3P58872 AL031601.1-201ENST00000605702 394 ntBASIC7.27□□□□□ -1.25
RHBDL3P58872 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC7.27□□□□□ -1.25
RHBDL3P58872 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC7.27□□□□□ -1.25
RHBDL3P58872 EEF1A1P14-201ENST00000421195 1376 ntBASIC7.27□□□□□ -1.25
RHBDL3P58872 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
RHBDL3P58872 SH3D19-210ENST00000514152 5107 ntAPPRIS ALT1 TSL 2 BASIC7.27□□□□□ -1.25
RHBDL3P58872 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
RHBDL3P58872 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.25
RHBDL3P58872 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
RHBDL3P58872 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
RHBDL3P58872 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC7.27□□□□□ -1.25
RHBDL3P58872 LRRIQ3-201ENST00000354431 2849 ntAPPRIS P2 TSL 5 BASIC7.27□□□□□ -1.25
RHBDL3P58872 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
RHBDL3P58872 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC7.27□□□□□ -1.25
RHBDL3P58872 RBPJP7-201ENST00000442803 1447 ntBASIC7.27□□□□□ -1.25
RHBDL3P58872 RBPJP5-201ENST00000449433 1447 ntBASIC7.27□□□□□ -1.25
RHBDL3P58872 NACA-203ENST00000454682 6629 ntTSL 5 BASIC7.27□□□□□ -1.25
RHBDL3P58872 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC7.27□□□□□ -1.25
RHBDL3P58872 CR1-203ENST00000367051 7469 ntTSL 5 BASIC7.26□□□□□ -1.25
RHBDL3P58872 CR1-204ENST00000367052 7469 ntTSL 5 BASIC7.26□□□□□ -1.25
RHBDL3P58872 CR1-205ENST00000367053 7469 ntTSL 5 BASIC7.26□□□□□ -1.25
RHBDL3P58872 GTF2IP4-201ENST00000453092 2054 ntBASIC7.26□□□□□ -1.25
RHBDL3P58872 TSC1-201ENST00000298552 8604 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
RHBDL3P58872 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
RHBDL3P58872 ANGEL2-201ENST00000360506 4323 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
RHBDL3P58872 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
RHBDL3P58872 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC7.26□□□□□ -1.25
RHBDL3P58872 RNU6-1251P-201ENST00000364502 107 ntBASIC7.26□□□□□ -1.25
RHBDL3P58872 RN7SKP81-201ENST00000365603 331 ntBASIC7.26□□□□□ -1.25
RHBDL3P58872 RNU6-883P-201ENST00000384597 107 ntBASIC7.26□□□□□ -1.25
RHBDL3P58872 SNORA17A-201ENST00000391185 133 ntBASIC7.26□□□□□ -1.25
RHBDL3P58872 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC7.26□□□□□ -1.25
RHBDL3P58872 AL356806.1-201ENST00000422524 916 ntBASIC7.26□□□□□ -1.25
RHBDL3P58872 RPL12P12-201ENST00000424633 501 ntBASIC7.26□□□□□ -1.25
RHBDL3P58872 AC006455.6-201ENST00000426192 893 ntBASIC7.26□□□□□ -1.25
RHBDL3P58872 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC7.26□□□□□ -1.25
RHBDL3P58872 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC7.26□□□□□ -1.25
RHBDL3P58872 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC7.26□□□□□ -1.25
RHBDL3P58872 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC7.26□□□□□ -1.25
RHBDL3P58872 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC7.26□□□□□ -1.25
RHBDL3P58872 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC7.26□□□□□ -1.25
RHBDL3P58872 ACA64.1-201ENST00000459171 127 ntBASIC7.26□□□□□ -1.25
RHBDL3P58872 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC7.26□□□□□ -1.25
RHBDL3P58872 OR11I1P-201ENST00000486033 954 ntBASIC7.26□□□□□ -1.25
RHBDL3P58872 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC7.26□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 130.2 ms