Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 RPSAP40-201ENST00000442343 891 ntBASIC6.1□□□□□ -1.43
HLA-DPA1P20036 AC097463.1-201ENST00000447288 481 ntBASIC6.1□□□□□ -1.43
HLA-DPA1P20036 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC6.1□□□□□ -1.43
HLA-DPA1P20036 AC090142.2-201ENST00000483263 416 ntBASIC6.1□□□□□ -1.43
HLA-DPA1P20036 AC083795.1-201ENST00000491760 320 ntBASIC6.1□□□□□ -1.43
HLA-DPA1P20036 CCDC11P1-201ENST00000503137 1162 ntBASIC6.1□□□□□ -1.43
HLA-DPA1P20036 PRMT5P1-201ENST00000514351 598 ntBASIC6.1□□□□□ -1.43
HLA-DPA1P20036 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC6.1□□□□□ -1.43
HLA-DPA1P20036 AC084121.1-201ENST00000533882 835 ntBASIC6.1□□□□□ -1.43
HLA-DPA1P20036 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
HLA-DPA1P20036 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC6.1□□□□□ -1.43
HLA-DPA1P20036 AC008126.1-201ENST00000549019 480 ntBASIC6.1□□□□□ -1.43
HLA-DPA1P20036 AL049779.3-201ENST00000557141 606 ntBASIC6.1□□□□□ -1.43
HLA-DPA1P20036 PSMA4-209ENST00000559082 1094 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
HLA-DPA1P20036 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC6.1□□□□□ -1.43
HLA-DPA1P20036 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC6.1□□□□□ -1.43
HLA-DPA1P20036 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC6.1□□□□□ -1.43
HLA-DPA1P20036 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC6.1□□□□□ -1.43
HLA-DPA1P20036 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC6.1□□□□□ -1.43
HLA-DPA1P20036 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC6.1□□□□□ -1.43
HLA-DPA1P20036 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
HLA-DPA1P20036 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC6.1□□□□□ -1.43
HLA-DPA1P20036 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC6.1□□□□□ -1.43
HLA-DPA1P20036 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
HLA-DPA1P20036 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC6.1□□□□□ -1.43
HLA-DPA1P20036 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
HLA-DPA1P20036 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
HLA-DPA1P20036 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
HLA-DPA1P20036 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC6.09□□□□□ -1.43
HLA-DPA1P20036 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC6.09□□□□□ -1.43
HLA-DPA1P20036 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC6.09□□□□□ -1.43
HLA-DPA1P20036 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
HLA-DPA1P20036 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
HLA-DPA1P20036 RBMY1HP-201ENST00000382759 1389 ntBASIC6.09□□□□□ -1.43
HLA-DPA1P20036 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC6.09□□□□□ -1.43
HLA-DPA1P20036 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
HLA-DPA1P20036 AL591135.1-201ENST00000401578 5914 ntBASIC6.09□□□□□ -1.43
HLA-DPA1P20036 AC005725.1-201ENST00000577346 2607 ntBASIC6.09□□□□□ -1.43
HLA-DPA1P20036 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
HLA-DPA1P20036 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC6.09□□□□□ -1.43
HLA-DPA1P20036 SNORD1C-201ENST00000363315 78 ntBASIC6.09□□□□□ -1.43
HLA-DPA1P20036 AL451142.1-201ENST00000375867 775 ntBASIC6.09□□□□□ -1.43
HLA-DPA1P20036 SSX3-202ENST00000376893 800 ntTSL 2 BASIC6.09□□□□□ -1.43
HLA-DPA1P20036 SNORA70.9-201ENST00000384370 135 ntBASIC6.09□□□□□ -1.43
HLA-DPA1P20036 OOSP1-201ENST00000398992 1270 ntBASIC6.09□□□□□ -1.43
HLA-DPA1P20036 SNORA11.5-201ENST00000408163 128 ntBASIC6.09□□□□□ -1.43
HLA-DPA1P20036 SNORA77.2-201ENST00000408571 112 ntBASIC6.09□□□□□ -1.43
HLA-DPA1P20036 AC245096.1-201ENST00000413104 546 ntBASIC6.09□□□□□ -1.43
HLA-DPA1P20036 AC098592.2-201ENST00000413158 265 ntBASIC6.09□□□□□ -1.43
HLA-DPA1P20036 VN1R31P-201ENST00000417498 730 ntBASIC6.09□□□□□ -1.43
HLA-DPA1P20036 AKR1B10P1-201ENST00000425765 942 ntBASIC6.09□□□□□ -1.43
HLA-DPA1P20036 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC6.09□□□□□ -1.43
HLA-DPA1P20036 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC6.09□□□□□ -1.43
HLA-DPA1P20036 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC6.09□□□□□ -1.43
HLA-DPA1P20036 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC6.09□□□□□ -1.43
HLA-DPA1P20036 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC6.09□□□□□ -1.43
HLA-DPA1P20036 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
HLA-DPA1P20036 AL133372.1-201ENST00000493565 745 ntBASIC6.09□□□□□ -1.43
HLA-DPA1P20036 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC6.09□□□□□ -1.43
HLA-DPA1P20036 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
HLA-DPA1P20036 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC6.09□□□□□ -1.43
HLA-DPA1P20036 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC6.09□□□□□ -1.43
HLA-DPA1P20036 HSD3BP3-201ENST00000514706 994 ntBASIC6.09□□□□□ -1.43
HLA-DPA1P20036 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC6.09□□□□□ -1.43
HLA-DPA1P20036 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC6.09□□□□□ -1.43
HLA-DPA1P20036 FAU-203ENST00000525297 355 ntTSL 5 BASIC6.09□□□□□ -1.43
HLA-DPA1P20036 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
HLA-DPA1P20036 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC6.09□□□□□ -1.43
HLA-DPA1P20036 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC6.09□□□□□ -1.43
HLA-DPA1P20036 AL845552.1-201ENST00000556820 323 ntBASIC6.09□□□□□ -1.43
HLA-DPA1P20036 AC026826.3-201ENST00000561747 158 ntBASIC6.09□□□□□ -1.43
HLA-DPA1P20036 AC092332.1-201ENST00000563684 829 ntBASIC6.09□□□□□ -1.43
HLA-DPA1P20036 AC002310.3-201ENST00000569728 723 ntBASIC6.09□□□□□ -1.43
HLA-DPA1P20036 AL136097.3-201ENST00000611097 505 ntBASIC6.09□□□□□ -1.43
HLA-DPA1P20036 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC6.09□□□□□ -1.43
HLA-DPA1P20036 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC6.09□□□□□ -1.43
HLA-DPA1P20036 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
HLA-DPA1P20036 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
HLA-DPA1P20036 HSPD1P9-201ENST00000420325 1636 ntBASIC6.09□□□□□ -1.43
HLA-DPA1P20036 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC6.09□□□□□ -1.43
HLA-DPA1P20036 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
HLA-DPA1P20036 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC6.09□□□□□ -1.43
HLA-DPA1P20036 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
HLA-DPA1P20036 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
HLA-DPA1P20036 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC6.09□□□□□ -1.44
HLA-DPA1P20036 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC6.09□□□□□ -1.44
HLA-DPA1P20036 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
HLA-DPA1P20036 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.44
HLA-DPA1P20036 AC119674.1-202ENST00000641333 1860 ntBASIC6.09□□□□□ -1.44
HLA-DPA1P20036 CAP1P2-201ENST00000417455 1409 ntBASIC6.08□□□□□ -1.44
HLA-DPA1P20036 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
HLA-DPA1P20036 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
HLA-DPA1P20036 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
HLA-DPA1P20036 THAP12P9-201ENST00000503971 2360 ntBASIC6.08□□□□□ -1.44
HLA-DPA1P20036 AL662795.2-201ENST00000624252 3706 ntBASIC6.08□□□□□ -1.44
HLA-DPA1P20036 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC6.08□□□□□ -1.44
HLA-DPA1P20036 MTND5P23-201ENST00000430812 1655 ntBASIC6.08□□□□□ -1.44
HLA-DPA1P20036 AL355377.1-201ENST00000621125 1653 ntBASIC6.08□□□□□ -1.44
HLA-DPA1P20036 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC6.08□□□□□ -1.44
HLA-DPA1P20036 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC6.08□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms