Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 AC073610.1-201ENST00000489971 396 ntBASIC6.04□□□□□ -1.44
HMGA1P17096 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
HMGA1P17096 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC6.04□□□□□ -1.44
HMGA1P17096 AC253576.1-201ENST00000511645 1156 ntBASIC6.04□□□□□ -1.44
HMGA1P17096 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC6.04□□□□□ -1.44
HMGA1P17096 DCN-210ENST00000547568 823 ntTSL 3 BASIC6.04□□□□□ -1.44
HMGA1P17096 AL049829.2-201ENST00000554010 285 ntTSL 3 BASIC6.04□□□□□ -1.44
HMGA1P17096 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
HMGA1P17096 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC6.04□□□□□ -1.44
HMGA1P17096 AC079414.3-201ENST00000612986 1090 ntBASIC6.04□□□□□ -1.44
HMGA1P17096 AC008115.3-201ENST00000614874 549 ntBASIC6.04□□□□□ -1.44
HMGA1P17096 HOTTIP_3.1-201ENST00000619957 337 ntBASIC6.04□□□□□ -1.44
HMGA1P17096 RBMXL1-201ENST00000321792 4799 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
HMGA1P17096 AC068490.1-202ENST00000637384 3185 ntTSL 5 BASIC6.04□□□□□ -1.44
HMGA1P17096 RARSP1-201ENST00000542842 1418 ntBASIC6.04□□□□□ -1.44
HMGA1P17096 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
HMGA1P17096 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
HMGA1P17096 AC079753.1-201ENST00000623243 3868 ntBASIC6.04□□□□□ -1.44
HMGA1P17096 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
HMGA1P17096 AL627309.5-201ENST00000484859 4860 ntTSL 5 BASIC6.04□□□□□ -1.44
HMGA1P17096 LRRC36-205ENST00000563189 2104 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
HMGA1P17096 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
HMGA1P17096 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
HMGA1P17096 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
HMGA1P17096 IMMTP1-201ENST00000435590 2219 ntBASIC6.03□□□□□ -1.44
HMGA1P17096 IARS-213ENST00000627121 4587 ntTSL 5 BASIC6.03□□□□□ -1.44
HMGA1P17096 CEACAM5-202ENST00000398599 2451 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
HMGA1P17096 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC6.03□□□□□ -1.44
HMGA1P17096 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
HMGA1P17096 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
HMGA1P17096 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
HMGA1P17096 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
HMGA1P17096 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
HMGA1P17096 RNA5SP131-201ENST00000365452 119 ntBASIC6.03□□□□□ -1.44
HMGA1P17096 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC6.03□□□□□ -1.44
HMGA1P17096 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC6.03□□□□□ -1.44
HMGA1P17096 GTF3AP1-201ENST00000416942 1004 ntBASIC6.03□□□□□ -1.44
HMGA1P17096 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC6.03□□□□□ -1.44
HMGA1P17096 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC6.03□□□□□ -1.44
HMGA1P17096 AL445687.2-201ENST00000458156 728 ntBASIC6.03□□□□□ -1.44
HMGA1P17096 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC6.03□□□□□ -1.44
HMGA1P17096 DUTP7-201ENST00000507982 486 ntBASIC6.03□□□□□ -1.44
HMGA1P17096 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC6.03□□□□□ -1.44
HMGA1P17096 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC6.03□□□□□ -1.44
HMGA1P17096 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC6.03□□□□□ -1.44
HMGA1P17096 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC6.03□□□□□ -1.44
HMGA1P17096 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC6.03□□□□□ -1.44
HMGA1P17096 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC6.03□□□□□ -1.44
HMGA1P17096 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC6.03□□□□□ -1.44
HMGA1P17096 AL049872.1-201ENST00000556323 322 ntBASIC6.03□□□□□ -1.44
HMGA1P17096 AC007346.2-201ENST00000564816 892 ntBASIC6.03□□□□□ -1.44
HMGA1P17096 HID1-AS1-201ENST00000577295 815 ntTSL 2 BASIC6.03□□□□□ -1.44
HMGA1P17096 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC6.03□□□□□ -1.44
HMGA1P17096 AC007683.2-201ENST00000624681 714 ntBASIC6.03□□□□□ -1.44
HMGA1P17096 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC6.03□□□□□ -1.44
HMGA1P17096 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC6.03□□□□□ -1.44
HMGA1P17096 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
HMGA1P17096 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC6.03□□□□□ -1.44
HMGA1P17096 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC6.03□□□□□ -1.44
HMGA1P17096 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
HMGA1P17096 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC6.03□□□□□ -1.44
HMGA1P17096 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
HMGA1P17096 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
HMGA1P17096 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
HMGA1P17096 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
HMGA1P17096 FBXL21-201ENST00000297158 1305 ntBASIC6.02□□□□□ -1.45
HMGA1P17096 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC6.02□□□□□ -1.45
HMGA1P17096 VN1R1-201ENST00000321039 2353 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
HMGA1P17096 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
HMGA1P17096 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
HMGA1P17096 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
HMGA1P17096 TMEM167B-201ENST00000338272 3730 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
HMGA1P17096 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
HMGA1P17096 RN7SKP124-201ENST00000364730 341 ntBASIC6.02□□□□□ -1.45
HMGA1P17096 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
HMGA1P17096 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC6.02□□□□□ -1.45
HMGA1P17096 AL121835.1-201ENST00000404250 354 ntBASIC6.02□□□□□ -1.45
HMGA1P17096 NIFKP3-201ENST00000417799 865 ntBASIC6.02□□□□□ -1.45
HMGA1P17096 NENFP1-201ENST00000419476 466 ntBASIC6.02□□□□□ -1.45
HMGA1P17096 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC6.02□□□□□ -1.45
HMGA1P17096 AC113412.1-201ENST00000425840 504 ntBASIC6.02□□□□□ -1.45
HMGA1P17096 AC012075.1-201ENST00000436549 580 ntBASIC6.02□□□□□ -1.45
HMGA1P17096 AC096775.1-201ENST00000437724 448 ntBASIC6.02□□□□□ -1.45
HMGA1P17096 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
HMGA1P17096 CYCSP51-201ENST00000443545 318 ntBASIC6.02□□□□□ -1.45
HMGA1P17096 AL355032.1-201ENST00000472981 438 ntBASIC6.02□□□□□ -1.45
HMGA1P17096 AC074386.1-201ENST00000476560 767 ntBASIC6.02□□□□□ -1.45
HMGA1P17096 RPS4XP14-201ENST00000493072 781 ntBASIC6.02□□□□□ -1.45
HMGA1P17096 EIF3LP3-201ENST00000495197 822 ntBASIC6.02□□□□□ -1.45
HMGA1P17096 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC6.02□□□□□ -1.45
HMGA1P17096 IGKV2-18-201ENST00000522607 343 ntBASIC6.02□□□□□ -1.45
HMGA1P17096 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC6.02□□□□□ -1.45
HMGA1P17096 MINCR-206ENST00000524335 499 ntTSL 2 BASIC6.02□□□□□ -1.45
HMGA1P17096 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
HMGA1P17096 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC6.02□□□□□ -1.45
HMGA1P17096 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC6.02□□□□□ -1.45
HMGA1P17096 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC6.02□□□□□ -1.45
HMGA1P17096 AP000864.1-201ENST00000609424 650 ntBASIC6.02□□□□□ -1.45
HMGA1P17096 MIR6826-201ENST00000617808 98 ntBASIC6.02□□□□□ -1.45
HMGA1P17096 OR5D13-201ENST00000623930 945 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 97.1 ms