Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 ELOC-205ENST00000520210 1451 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
TPM1P09493 AC217777.1-201ENST00000570034 1471 ntBASIC6.47□□□□□ -1.37
TPM1P09493 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC6.47□□□□□ -1.37
TPM1P09493 AC012078.1-201ENST00000405035 1646 ntBASIC6.47□□□□□ -1.37
TPM1P09493 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
TPM1P09493 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC6.47□□□□□ -1.37
TPM1P09493 SEC61G-201ENST00000352861 462 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
TPM1P09493 RNA5SP85-201ENST00000365378 119 ntBASIC6.47□□□□□ -1.37
TPM1P09493 AC087752.1-201ENST00000391360 558 ntBASIC6.47□□□□□ -1.37
TPM1P09493 AC079809.1-201ENST00000415468 276 ntBASIC6.47□□□□□ -1.37
TPM1P09493 HMGN2P27-201ENST00000427352 270 ntBASIC6.47□□□□□ -1.37
TPM1P09493 PSMD10P2-201ENST00000432890 672 ntBASIC6.47□□□□□ -1.37
TPM1P09493 TRGC2-201ENST00000436911 1013 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
TPM1P09493 AC096775.1-201ENST00000437724 448 ntBASIC6.47□□□□□ -1.37
TPM1P09493 MED28P3-201ENST00000444288 531 ntBASIC6.47□□□□□ -1.37
TPM1P09493 AP003385.3-201ENST00000472498 287 ntBASIC6.47□□□□□ -1.37
TPM1P09493 AC015524.1-201ENST00000491585 472 ntBASIC6.47□□□□□ -1.37
TPM1P09493 OR7E157P-201ENST00000494376 911 ntBASIC6.47□□□□□ -1.37
TPM1P09493 ADAM3A-209ENST00000497806 1245 ntTSL 5 BASIC6.47□□□□□ -1.37
TPM1P09493 LINC02218-202ENST00000504998 582 ntTSL 4 BASIC6.47□□□□□ -1.37
TPM1P09493 OR7E99P-201ENST00000505750 922 ntBASIC6.47□□□□□ -1.37
TPM1P09493 RNA5SP434-201ENST00000516647 121 ntBASIC6.47□□□□□ -1.37
TPM1P09493 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC6.47□□□□□ -1.37
TPM1P09493 BCAS2P1-201ENST00000528022 632 ntBASIC6.47□□□□□ -1.37
TPM1P09493 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC6.47□□□□□ -1.37
TPM1P09493 AP004609.2-201ENST00000532177 190 ntBASIC6.47□□□□□ -1.37
TPM1P09493 BICD1-206ENST00000551086 423 ntTSL 3 BASIC6.47□□□□□ -1.37
TPM1P09493 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC6.47□□□□□ -1.37
TPM1P09493 BMS1P16-201ENST00000556075 1147 ntBASIC6.47□□□□□ -1.37
TPM1P09493 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC6.47□□□□□ -1.37
TPM1P09493 AC016839.1-201ENST00000578162 867 ntBASIC6.47□□□□□ -1.37
TPM1P09493 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC6.47□□□□□ -1.37
TPM1P09493 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC6.47□□□□□ -1.37
TPM1P09493 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC6.47□□□□□ -1.37
TPM1P09493 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC6.47□□□□□ -1.37
TPM1P09493 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
TPM1P09493 AL589765.6-201ENST00000601909 549 ntBASIC6.47□□□□□ -1.37
TPM1P09493 AL078624.2-201ENST00000605063 554 ntBASIC6.47□□□□□ -1.37
TPM1P09493 AC007100.1-201ENST00000606382 478 ntTSL 5 BASIC6.47□□□□□ -1.37
TPM1P09493 PSMD10P2-203ENST00000627340 914 ntTSL 5 BASIC6.47□□□□□ -1.37
TPM1P09493 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC6.47□□□□□ -1.37
TPM1P09493 OFD1P8Y-201ENST00000449148 1433 ntBASIC6.47□□□□□ -1.37
TPM1P09493 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC6.47□□□□□ -1.37
TPM1P09493 CENPN-203ENST00000393335 1556 ntTSL 2 BASIC6.47□□□□□ -1.37
TPM1P09493 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
TPM1P09493 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
TPM1P09493 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC6.47□□□□□ -1.37
TPM1P09493 ANTXR2-204ENST00000404191 1469 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
TPM1P09493 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
TPM1P09493 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC6.46□□□□□ -1.37
TPM1P09493 AC126755.2-201ENST00000545114 1522 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
TPM1P09493 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
TPM1P09493 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC6.46□□□□□ -1.38
TPM1P09493 AP001029.2-203ENST00000589795 4910 ntBASIC6.46□□□□□ -1.38
TPM1P09493 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.38
TPM1P09493 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
TPM1P09493 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC6.46□□□□□ -1.38
TPM1P09493 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
TPM1P09493 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
TPM1P09493 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
TPM1P09493 RN7SKP185-201ENST00000362813 326 ntBASIC6.46□□□□□ -1.38
TPM1P09493 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC6.46□□□□□ -1.38
TPM1P09493 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
TPM1P09493 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC6.46□□□□□ -1.38
TPM1P09493 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC6.46□□□□□ -1.38
TPM1P09493 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC6.46□□□□□ -1.38
TPM1P09493 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC6.46□□□□□ -1.38
TPM1P09493 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC6.46□□□□□ -1.38
TPM1P09493 AL445991.1-201ENST00000450381 475 ntBASIC6.46□□□□□ -1.38
TPM1P09493 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC6.46□□□□□ -1.38
TPM1P09493 RN7SL502P-201ENST00000481857 290 ntBASIC6.46□□□□□ -1.38
TPM1P09493 AC095052.1-201ENST00000509955 863 ntBASIC6.46□□□□□ -1.38
TPM1P09493 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.38
TPM1P09493 AP3S2-214ENST00000560940 519 ntTSL 5 BASIC6.46□□□□□ -1.38
TPM1P09493 AC010531.4-201ENST00000570286 576 ntTSL 4 BASIC6.46□□□□□ -1.38
TPM1P09493 AC027796.1-201ENST00000575593 512 ntBASIC6.46□□□□□ -1.38
TPM1P09493 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC6.46□□□□□ -1.38
TPM1P09493 AL645933.2-201ENST00000606743 1207 ntBASIC6.46□□□□□ -1.38
TPM1P09493 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC6.46□□□□□ -1.38
TPM1P09493 OR51C1P-201ENST00000608504 942 ntBASIC6.46□□□□□ -1.38
TPM1P09493 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC6.46□□□□□ -1.38
TPM1P09493 AC007786.3-201ENST00000615154 596 ntBASIC6.46□□□□□ -1.38
TPM1P09493 MIR6736-201ENST00000616799 59 ntBASIC6.46□□□□□ -1.38
TPM1P09493 MIR6829-201ENST00000620375 67 ntBASIC6.46□□□□□ -1.38
TPM1P09493 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC6.46□□□□□ -1.38
TPM1P09493 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
TPM1P09493 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.38
TPM1P09493 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
TPM1P09493 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
TPM1P09493 LEKR1-201ENST00000356539 2572 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
TPM1P09493 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC6.46□□□□□ -1.38
TPM1P09493 PLEKHA5-216ENST00000540972 1954 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
TPM1P09493 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
TPM1P09493 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
TPM1P09493 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
TPM1P09493 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
TPM1P09493 RPS2P45-201ENST00000469997 2057 ntBASIC6.45□□□□□ -1.38
TPM1P09493 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
TPM1P09493 AL360270.2-201ENST00000562952 5985 ntBASIC6.45□□□□□ -1.38
TPM1P09493 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC6.45□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms