Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 RN7SKP121-201ENST00000410842 305 ntBASIC4.49□□□□□ -1.69
CXCL1P09341 RPL21P50-201ENST00000417698 477 ntBASIC4.49□□□□□ -1.69
CXCL1P09341 PTPN2P1-201ENST00000423212 1072 ntBASIC4.49□□□□□ -1.69
CXCL1P09341 OR52S1P-201ENST00000427016 937 ntBASIC4.49□□□□□ -1.69
CXCL1P09341 RPL34P6-201ENST00000432390 345 ntBASIC4.49□□□□□ -1.69
CXCL1P09341 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
CXCL1P09341 SOCS5P1-201ENST00000440415 949 ntBASIC4.49□□□□□ -1.69
CXCL1P09341 AC019186.1-201ENST00000447019 545 ntTSL 3 BASIC4.49□□□□□ -1.69
CXCL1P09341 OR52E3P-201ENST00000452083 936 ntBASIC4.49□□□□□ -1.69
CXCL1P09341 AC092675.1-203ENST00000454230 538 ntTSL 5 BASIC4.49□□□□□ -1.69
CXCL1P09341 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CXCL1P09341 XAGE1B-205ENST00000518075 472 ntAPPRIS P1 TSL 2 BASIC4.49□□□□□ -1.69
CXCL1P09341 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC4.49□□□□□ -1.69
CXCL1P09341 LRP4-AS1-202ENST00000531719 731 ntTSL 4 BASIC4.49□□□□□ -1.69
CXCL1P09341 AL121594.2-201ENST00000541658 472 ntBASIC4.49□□□□□ -1.69
CXCL1P09341 DAAM1-208ENST00000556135 582 ntTSL 3 BASIC4.49□□□□□ -1.69
CXCL1P09341 NMNAT1P5-201ENST00000559657 841 ntBASIC4.49□□□□□ -1.69
CXCL1P09341 AC025430.1-201ENST00000561324 498 ntTSL 3 BASIC4.49□□□□□ -1.69
CXCL1P09341 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC4.49□□□□□ -1.69
CXCL1P09341 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC4.49□□□□□ -1.69
CXCL1P09341 AC119403.2-201ENST00000590960 598 ntBASIC4.49□□□□□ -1.69
CXCL1P09341 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC4.49□□□□□ -1.69
CXCL1P09341 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC4.49□□□□□ -1.69
CXCL1P09341 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC4.49□□□□□ -1.69
CXCL1P09341 uc_338.26-201ENST00000612659 160 ntBASIC4.49□□□□□ -1.69
CXCL1P09341 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CXCL1P09341 AL353684.1-201ENST00000622677 1120 ntBASIC4.49□□□□□ -1.69
CXCL1P09341 AP001962.1-201ENST00000624114 559 ntBASIC4.49□□□□□ -1.69
CXCL1P09341 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC4.49□□□□□ -1.69
CXCL1P09341 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC4.49□□□□□ -1.69
CXCL1P09341 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC4.49□□□□□ -1.69
CXCL1P09341 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CXCL1P09341 CASC19-248ENST00000641674 1356 ntBASIC4.49□□□□□ -1.69
CXCL1P09341 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CXCL1P09341 OSBPL9P1-201ENST00000604744 1469 ntBASIC4.49□□□□□ -1.69
CXCL1P09341 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CXCL1P09341 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC4.49□□□□□ -1.69
CXCL1P09341 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC4.49□□□□□ -1.69
CXCL1P09341 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CXCL1P09341 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC4.48□□□□□ -1.69
CXCL1P09341 AC006206.1-201ENST00000544842 3387 ntBASIC4.48□□□□□ -1.69
CXCL1P09341 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
CXCL1P09341 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CXCL1P09341 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC4.48□□□□□ -1.69
CXCL1P09341 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
CXCL1P09341 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CXCL1P09341 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
CXCL1P09341 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CXCL1P09341 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
CXCL1P09341 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
CXCL1P09341 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC4.48□□□□□ -1.69
CXCL1P09341 OR4F21-201ENST00000320901 995 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
CXCL1P09341 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CXCL1P09341 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC4.48□□□□□ -1.69
CXCL1P09341 RNU1-5P-201ENST00000362684 144 ntBASIC4.48□□□□□ -1.69
CXCL1P09341 OR10R2-201ENST00000368152 1008 ntAPPRIS P2 BASIC4.48□□□□□ -1.69
CXCL1P09341 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
CXCL1P09341 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC4.48□□□□□ -1.69
CXCL1P09341 OOSP1-201ENST00000398992 1270 ntBASIC4.48□□□□□ -1.69
CXCL1P09341 PLGLB1-202ENST00000409310 960 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CXCL1P09341 RN7SKP97-201ENST00000410966 333 ntBASIC4.48□□□□□ -1.69
CXCL1P09341 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC4.48□□□□□ -1.69
CXCL1P09341 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CXCL1P09341 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC4.48□□□□□ -1.69
CXCL1P09341 OR10T1P-201ENST00000424327 947 ntBASIC4.48□□□□□ -1.69
CXCL1P09341 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC4.48□□□□□ -1.69
CXCL1P09341 AC100823.1-201ENST00000442274 480 ntTSL 3 BASIC4.48□□□□□ -1.69
CXCL1P09341 AC003035.2-201ENST00000448948 696 ntTSL 3 BASIC4.48□□□□□ -1.69
CXCL1P09341 TAAR4P-201ENST00000454843 1039 ntBASIC4.48□□□□□ -1.69
CXCL1P09341 RPL12P31-201ENST00000478433 450 ntBASIC4.48□□□□□ -1.69
CXCL1P09341 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC4.48□□□□□ -1.69
CXCL1P09341 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC4.48□□□□□ -1.69
CXCL1P09341 AC021193.1-201ENST00000511607 420 ntBASIC4.48□□□□□ -1.69
CXCL1P09341 MINOS1P4-201ENST00000515470 318 ntBASIC4.48□□□□□ -1.69
CXCL1P09341 AC021146.10-201ENST00000515628 706 ntBASIC4.48□□□□□ -1.69
CXCL1P09341 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC4.48□□□□□ -1.69
CXCL1P09341 OR4A17P-201ENST00000526032 904 ntBASIC4.48□□□□□ -1.69
CXCL1P09341 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC4.48□□□□□ -1.69
CXCL1P09341 CASP5-209ENST00000531367 879 ntTSL 5 BASIC4.48□□□□□ -1.69
CXCL1P09341 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC4.48□□□□□ -1.69
CXCL1P09341 AL137230.1-202ENST00000553996 420 ntTSL 2 BASIC4.48□□□□□ -1.69
CXCL1P09341 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC4.48□□□□□ -1.69
CXCL1P09341 AC136285.2-201ENST00000562873 378 ntTSL 3 BASIC4.48□□□□□ -1.69
CXCL1P09341 AC010287.1-201ENST00000566916 357 ntBASIC4.48□□□□□ -1.69
CXCL1P09341 AC010266.1-201ENST00000568962 442 ntTSL 5 BASIC4.48□□□□□ -1.69
CXCL1P09341 AC133552.4-201ENST00000576103 676 ntBASIC4.48□□□□□ -1.69
CXCL1P09341 AC068254.1-201ENST00000584753 483 ntTSL 3 BASIC4.48□□□□□ -1.69
CXCL1P09341 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC4.48□□□□□ -1.69
CXCL1P09341 RPL29P33-201ENST00000587474 316 ntBASIC4.48□□□□□ -1.69
CXCL1P09341 AC063977.7-201ENST00000594454 337 ntBASIC4.48□□□□□ -1.69
CXCL1P09341 AC008555.7-201ENST00000605008 583 ntBASIC4.48□□□□□ -1.69
CXCL1P09341 HIRAP1-201ENST00000605318 787 ntBASIC4.48□□□□□ -1.69
CXCL1P09341 AC141002.1-201ENST00000607025 279 ntBASIC4.48□□□□□ -1.69
CXCL1P09341 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC4.48□□□□□ -1.69
CXCL1P09341 LINC01676-209ENST00000623043 896 ntTSL 4 BASIC4.48□□□□□ -1.69
CXCL1P09341 AC027559.1-201ENST00000636288 271 ntBASIC4.48□□□□□ -1.69
CXCL1P09341 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC4.48□□□□□ -1.69
CXCL1P09341 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
CXCL1P09341 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
CXCL1P09341 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 68.6 ms