Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 RGS2-201ENST00000235382 1354 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SNX3O60493 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
SNX3O60493 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.74□□□□□ -1.49
SNX3O60493 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC5.74□□□□□ -1.49
SNX3O60493 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC5.74□□□□□ -1.49
SNX3O60493 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SNX3O60493 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SNX3O60493 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SNX3O60493 FHL5-203ENST00000541107 1904 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SNX3O60493 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SNX3O60493 HSPD1P1-201ENST00000503199 1726 ntBASIC5.74□□□□□ -1.49
SNX3O60493 C8orf34-AS1-201ENST00000512294 1600 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SNX3O60493 OR5AQ1P-203ENST00000641818 1529 ntBASIC5.74□□□□□ -1.49
SNX3O60493 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.73□□□□□ -1.49
SNX3O60493 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC5.73□□□□□ -1.49
SNX3O60493 HSPD1P7-201ENST00000447985 1686 ntBASIC5.73□□□□□ -1.49
SNX3O60493 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
SNX3O60493 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SNX3O60493 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.73□□□□□ -1.49
SNX3O60493 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC5.73□□□□□ -1.49
SNX3O60493 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SNX3O60493 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SNX3O60493 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
SNX3O60493 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
SNX3O60493 U3.28-201ENST00000391249 210 ntBASIC5.73□□□□□ -1.49
SNX3O60493 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
SNX3O60493 AC024937.2-201ENST00000411669 1242 ntBASIC5.73□□□□□ -1.49
SNX3O60493 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC5.73□□□□□ -1.49
SNX3O60493 NDUFB4P8-201ENST00000435351 367 ntBASIC5.73□□□□□ -1.49
SNX3O60493 LINC01681-201ENST00000439184 760 ntTSL 2 BASIC5.73□□□□□ -1.49
SNX3O60493 MTND3P6-201ENST00000485242 339 ntBASIC5.73□□□□□ -1.49
SNX3O60493 GM2AP2-201ENST00000491764 562 ntBASIC5.73□□□□□ -1.49
SNX3O60493 AC093664.1-201ENST00000511779 289 ntBASIC5.73□□□□□ -1.49
SNX3O60493 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
SNX3O60493 IGLVVII-41-1-201ENST00000518405 151 ntBASIC5.73□□□□□ -1.49
SNX3O60493 HNRNPRP2-201ENST00000528421 743 ntBASIC5.73□□□□□ -1.49
SNX3O60493 AC079600.3-201ENST00000547898 447 ntTSL 5 BASIC5.73□□□□□ -1.49
SNX3O60493 BICD1-206ENST00000551086 423 ntTSL 3 BASIC5.73□□□□□ -1.49
SNX3O60493 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC5.73□□□□□ -1.49
SNX3O60493 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC5.73□□□□□ -1.49
SNX3O60493 AC126323.4-201ENST00000566935 234 ntBASIC5.73□□□□□ -1.49
SNX3O60493 RN7SL131P-201ENST00000579043 256 ntBASIC5.73□□□□□ -1.49
SNX3O60493 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC5.73□□□□□ -1.49
SNX3O60493 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC5.73□□□□□ -1.49
SNX3O60493 NQO2-209ENST00000606474 470 ntTSL 3 BASIC5.73□□□□□ -1.49
SNX3O60493 AC020658.4-201ENST00000613987 684 ntBASIC5.73□□□□□ -1.49
SNX3O60493 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC5.73□□□□□ -1.49
SNX3O60493 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC5.73□□□□□ -1.49
SNX3O60493 FRG1EP-201ENST00000634469 770 ntBASIC5.73□□□□□ -1.49
SNX3O60493 AC022167.5-202ENST00000637237 701 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
SNX3O60493 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
SNX3O60493 AC073136.1-201ENST00000449426 2884 ntBASIC5.73□□□□□ -1.49
SNX3O60493 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.73□□□□□ -1.49
SNX3O60493 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SNX3O60493 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.73□□□□□ -1.49
SNX3O60493 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SNX3O60493 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SNX3O60493 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.73□□□□□ -1.49
SNX3O60493 OR5AQ1P-202ENST00000641257 1534 ntBASIC5.73□□□□□ -1.49
SNX3O60493 AL049869.1-201ENST00000556933 1402 ntBASIC5.73□□□□□ -1.49
SNX3O60493 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
SNX3O60493 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
SNX3O60493 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
SNX3O60493 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC5.72□□□□□ -1.49
SNX3O60493 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.72□□□□□ -1.49
SNX3O60493 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
SNX3O60493 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SNX3O60493 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SNX3O60493 RNA5SP308-201ENST00000362532 115 ntBASIC5.72□□□□□ -1.49
SNX3O60493 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
SNX3O60493 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
SNX3O60493 AC026310.1-201ENST00000396004 378 ntBASIC5.72□□□□□ -1.49
SNX3O60493 AL157702.1-201ENST00000398764 426 ntBASIC5.72□□□□□ -1.49
SNX3O60493 AC084030.1-202ENST00000413385 880 ntTSL 5 BASIC5.72□□□□□ -1.49
SNX3O60493 MICG-208ENST00000416822 132 ntBASIC5.72□□□□□ -1.49
SNX3O60493 AL121878.1-201ENST00000418638 859 ntBASIC5.72□□□□□ -1.49
SNX3O60493 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SNX3O60493 AC117434.1-201ENST00000419971 836 ntBASIC5.72□□□□□ -1.49
SNX3O60493 LINC01687-203ENST00000420255 897 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SNX3O60493 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC5.72□□□□□ -1.49
SNX3O60493 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SNX3O60493 GTF3AP6-201ENST00000432585 986 ntBASIC5.72□□□□□ -1.49
SNX3O60493 OR3D1P-201ENST00000438288 955 ntBASIC5.72□□□□□ -1.49
SNX3O60493 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC5.72□□□□□ -1.49
SNX3O60493 AL845321.1-201ENST00000444603 348 ntBASIC5.72□□□□□ -1.49
SNX3O60493 ZNF619P1-201ENST00000446539 752 ntBASIC5.72□□□□□ -1.49
SNX3O60493 AC007386.1-201ENST00000455212 582 ntBASIC5.72□□□□□ -1.49
SNX3O60493 MTCYBP14-201ENST00000457471 715 ntBASIC5.72□□□□□ -1.49
SNX3O60493 RPL12P24-201ENST00000474907 486 ntBASIC5.72□□□□□ -1.49
SNX3O60493 RPL34P33-201ENST00000486062 334 ntBASIC5.72□□□□□ -1.49
SNX3O60493 OR2A3P-201ENST00000493774 953 ntBASIC5.72□□□□□ -1.49
SNX3O60493 OR52A4P-203ENST00000498233 1014 ntBASIC5.72□□□□□ -1.49
SNX3O60493 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC5.72□□□□□ -1.49
SNX3O60493 ODF1-202ENST00000518835 368 ntTSL 3 BASIC5.72□□□□□ -1.49
SNX3O60493 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC5.72□□□□□ -1.49
SNX3O60493 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC5.72□□□□□ -1.49
SNX3O60493 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SNX3O60493 AC021269.1-201ENST00000526860 705 ntBASIC5.72□□□□□ -1.49
SNX3O60493 MIR7853-201ENST00000584820 132 ntBASIC5.72□□□□□ -1.49
SNX3O60493 AC026898.1-201ENST00000586404 571 ntBASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms