Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SSX4O60224 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SSX4O60224 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
SSX4O60224 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SSX4O60224 RNA5-8SP5-201ENST00000365304 152 ntBASIC5.61□□□□□ -1.51
SSX4O60224 RN7SKP186-201ENST00000365371 303 ntBASIC5.61□□□□□ -1.51
SSX4O60224 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SSX4O60224 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SSX4O60224 AC007068.1-201ENST00000396690 844 ntBASIC5.61□□□□□ -1.51
SSX4O60224 RBBP4P5-201ENST00000398583 1266 ntBASIC5.61□□□□□ -1.51
SSX4O60224 IFIT1P1-201ENST00000400497 1449 ntBASIC5.61□□□□□ -1.51
SSX4O60224 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC5.61□□□□□ -1.51
SSX4O60224 AL929472.1-201ENST00000417484 429 ntBASIC5.61□□□□□ -1.51
SSX4O60224 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC5.61□□□□□ -1.51
SSX4O60224 AC015977.1-201ENST00000418887 292 ntBASIC5.61□□□□□ -1.51
SSX4O60224 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC5.61□□□□□ -1.51
SSX4O60224 MTCO1P57-201ENST00000432182 261 ntBASIC5.61□□□□□ -1.51
SSX4O60224 GTF3AP6-201ENST00000432585 986 ntBASIC5.61□□□□□ -1.51
SSX4O60224 GAPDHP75-201ENST00000433910 943 ntBASIC5.61□□□□□ -1.51
SSX4O60224 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC5.61□□□□□ -1.51
SSX4O60224 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC5.61□□□□□ -1.51
SSX4O60224 PSMC1P6-201ENST00000477233 1319 ntBASIC5.61□□□□□ -1.51
SSX4O60224 AC022415.1-202ENST00000486612 523 ntBASIC5.61□□□□□ -1.51
SSX4O60224 AL035690.1-201ENST00000490892 383 ntBASIC5.61□□□□□ -1.51
SSX4O60224 RN7SL362P-201ENST00000494228 267 ntBASIC5.61□□□□□ -1.51
SSX4O60224 RPS26P24-201ENST00000497656 331 ntBASIC5.61□□□□□ -1.51
SSX4O60224 AC022325.1-201ENST00000502748 2199 ntBASIC5.61□□□□□ -1.51
SSX4O60224 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC5.61□□□□□ -1.51
SSX4O60224 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SSX4O60224 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC5.61□□□□□ -1.51
SSX4O60224 ACTR6P1-201ENST00000514311 1104 ntBASIC5.61□□□□□ -1.51
SSX4O60224 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC5.61□□□□□ -1.51
SSX4O60224 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC5.61□□□□□ -1.51
SSX4O60224 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC5.61□□□□□ -1.51
SSX4O60224 EIF4A2P3-201ENST00000525903 1055 ntBASIC5.61□□□□□ -1.51
SSX4O60224 AP002498.1-201ENST00000530190 568 ntTSL 3 BASIC5.61□□□□□ -1.51
SSX4O60224 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC5.61□□□□□ -1.51
SSX4O60224 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC5.61□□□□□ -1.51
SSX4O60224 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SSX4O60224 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC5.61□□□□□ -1.51
SSX4O60224 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC5.61□□□□□ -1.51
SSX4O60224 LINC02207-201ENST00000554530 1256 ntTSL 5 BASIC5.61□□□□□ -1.51
SSX4O60224 AL845552.1-201ENST00000556820 323 ntBASIC5.61□□□□□ -1.51
SSX4O60224 AC026956.1-201ENST00000558741 396 ntBASIC5.61□□□□□ -1.51
SSX4O60224 AC090651.1-201ENST00000567865 634 ntBASIC5.61□□□□□ -1.51
SSX4O60224 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
SSX4O60224 MIR4502-201ENST00000580432 81 ntBASIC5.61□□□□□ -1.51
SSX4O60224 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC5.61□□□□□ -1.51
SSX4O60224 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
SSX4O60224 CHMP1B-AS1-201ENST00000586474 553 ntTSL 4 BASIC5.61□□□□□ -1.51
SSX4O60224 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC5.61□□□□□ -1.51
SSX4O60224 DYNLL1P1-201ENST00000595442 269 ntBASIC5.61□□□□□ -1.51
SSX4O60224 AC003973.2-201ENST00000596778 1394 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SSX4O60224 AC005520.3-201ENST00000602874 370 ntBASIC5.61□□□□□ -1.51
SSX4O60224 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC5.61□□□□□ -1.51
SSX4O60224 AC007620.3-201ENST00000608131 497 ntBASIC5.61□□□□□ -1.51
SSX4O60224 AC093635.1-201ENST00000609028 555 ntBASIC5.61□□□□□ -1.51
SSX4O60224 AP005131.7-201ENST00000610087 611 ntBASIC5.61□□□□□ -1.51
SSX4O60224 uc_338.31-201ENST00000615595 186 ntBASIC5.61□□□□□ -1.51
SSX4O60224 AC005261.6-201ENST00000623072 1387 ntBASIC5.61□□□□□ -1.51
SSX4O60224 AC027279.4-201ENST00000624371 2072 ntBASIC5.61□□□□□ -1.51
SSX4O60224 TEX41-255ENST00000626404 610 ntTSL 5 BASIC5.61□□□□□ -1.51
SSX4O60224 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC5.61□□□□□ -1.51
SSX4O60224 AC022726.2-201ENST00000634673 547 ntBASIC5.61□□□□□ -1.51
SSX4O60224 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
SSX4O60224 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
SSX4O60224 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
SSX4O60224 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SSX4O60224 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
SSX4O60224 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC5.61□□□□□ -1.51
SSX4O60224 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC5.61□□□□□ -1.51
SSX4O60224 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
SSX4O60224 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SSX4O60224 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SSX4O60224 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.6□□□□□ -1.51
SSX4O60224 LRRC37A15P-201ENST00000514785 1355 ntBASIC5.6□□□□□ -1.51
SSX4O60224 AC022613.3-201ENST00000560740 1346 ntBASIC5.6□□□□□ -1.51
SSX4O60224 OR4F17-201ENST00000318050 1054 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
SSX4O60224 OR4F4-201ENST00000326183 1054 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
SSX4O60224 RNU6-697P-201ENST00000363348 107 ntBASIC5.6□□□□□ -1.51
SSX4O60224 RNU6-618P-201ENST00000363518 112 ntBASIC5.6□□□□□ -1.51
SSX4O60224 RNU1-84P-201ENST00000365447 164 ntBASIC5.6□□□□□ -1.51
SSX4O60224 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SSX4O60224 AL121977.1-201ENST00000401636 979 ntBASIC5.6□□□□□ -1.51
SSX4O60224 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC5.6□□□□□ -1.51
SSX4O60224 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SSX4O60224 MRPS21P5-201ENST00000417885 231 ntBASIC5.6□□□□□ -1.51
SSX4O60224 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC5.6□□□□□ -1.51
SSX4O60224 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC5.6□□□□□ -1.51
SSX4O60224 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC5.6□□□□□ -1.51
SSX4O60224 ARAFP1-201ENST00000422172 605 ntBASIC5.6□□□□□ -1.51
SSX4O60224 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC5.6□□□□□ -1.51
SSX4O60224 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC5.6□□□□□ -1.51
SSX4O60224 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC5.6□□□□□ -1.51
SSX4O60224 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC5.6□□□□□ -1.51
SSX4O60224 COX4I1P2-201ENST00000447446 547 ntBASIC5.6□□□□□ -1.51
SSX4O60224 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC5.6□□□□□ -1.51
SSX4O60224 PANCR-201ENST00000503456 493 ntTSL 5 BASIC5.6□□□□□ -1.51
SSX4O60224 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC5.6□□□□□ -1.51
SSX4O60224 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms