Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 AC016908.1-201ENST00000442571 1219 ntBASIC5.58□□□□□ -1.52
NPIPA3F8WFD2 AL022237.1-201ENST00000446663 358 ntBASIC5.58□□□□□ -1.52
NPIPA3F8WFD2 AC103563.5-201ENST00000455643 364 ntBASIC5.58□□□□□ -1.52
NPIPA3F8WFD2 ACA64.1-201ENST00000459171 127 ntBASIC5.58□□□□□ -1.52
NPIPA3F8WFD2 AC084754.1-201ENST00000463466 464 ntBASIC5.58□□□□□ -1.52
NPIPA3F8WFD2 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
NPIPA3F8WFD2 PPP1R11P1-201ENST00000486095 376 ntBASIC5.58□□□□□ -1.52
NPIPA3F8WFD2 OR5H7P-201ENST00000514084 930 ntBASIC5.58□□□□□ -1.52
NPIPA3F8WFD2 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC5.58□□□□□ -1.52
NPIPA3F8WFD2 IGLVIV-64-201ENST00000518581 301 ntBASIC5.58□□□□□ -1.52
NPIPA3F8WFD2 AC021269.1-201ENST00000526860 705 ntBASIC5.58□□□□□ -1.52
NPIPA3F8WFD2 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC5.58□□□□□ -1.52
NPIPA3F8WFD2 AP001858.2-201ENST00000536213 601 ntBASIC5.58□□□□□ -1.52
NPIPA3F8WFD2 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC5.58□□□□□ -1.52
NPIPA3F8WFD2 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
NPIPA3F8WFD2 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC5.58□□□□□ -1.52
NPIPA3F8WFD2 AC007956.1-201ENST00000555623 542 ntBASIC5.58□□□□□ -1.52
NPIPA3F8WFD2 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC5.58□□□□□ -1.52
NPIPA3F8WFD2 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC5.58□□□□□ -1.52
NPIPA3F8WFD2 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC5.58□□□□□ -1.52
NPIPA3F8WFD2 AC008521.2-201ENST00000591021 259 ntBASIC5.58□□□□□ -1.52
NPIPA3F8WFD2 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC5.58□□□□□ -1.52
NPIPA3F8WFD2 AC068768.2-201ENST00000602352 343 ntBASIC5.58□□□□□ -1.52
NPIPA3F8WFD2 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC5.58□□□□□ -1.52
NPIPA3F8WFD2 AC245014.3-201ENST00000618589 347 ntBASIC5.58□□□□□ -1.52
NPIPA3F8WFD2 OR5D13-201ENST00000623930 945 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
NPIPA3F8WFD2 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC5.58□□□□□ -1.52
NPIPA3F8WFD2 AP000550.3-201ENST00000637734 379 ntBASIC5.58□□□□□ -1.52
NPIPA3F8WFD2 AC116667.2-201ENST00000641075 823 ntBASIC5.58□□□□□ -1.52
NPIPA3F8WFD2 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
NPIPA3F8WFD2 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
NPIPA3F8WFD2 AC092724.1-201ENST00000624623 3397 ntBASIC5.58□□□□□ -1.52
NPIPA3F8WFD2 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
NPIPA3F8WFD2 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC5.58□□□□□ -1.52
NPIPA3F8WFD2 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC5.58□□□□□ -1.52
NPIPA3F8WFD2 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC5.58□□□□□ -1.52
NPIPA3F8WFD2 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
NPIPA3F8WFD2 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.58□□□□□ -1.52
NPIPA3F8WFD2 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC5.58□□□□□ -1.52
NPIPA3F8WFD2 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC5.57□□□□□ -1.52
NPIPA3F8WFD2 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
NPIPA3F8WFD2 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.57□□□□□ -1.52
NPIPA3F8WFD2 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
NPIPA3F8WFD2 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
NPIPA3F8WFD2 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
NPIPA3F8WFD2 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
NPIPA3F8WFD2 AC008627.1-201ENST00000517511 1704 ntBASIC5.57□□□□□ -1.52
NPIPA3F8WFD2 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
NPIPA3F8WFD2 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC5.57□□□□□ -1.52
NPIPA3F8WFD2 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
NPIPA3F8WFD2 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC5.57□□□□□ -1.52
NPIPA3F8WFD2 CCNT2P1-201ENST00000423082 1315 ntBASIC5.57□□□□□ -1.52
NPIPA3F8WFD2 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
NPIPA3F8WFD2 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
NPIPA3F8WFD2 OR11H13P-201ENST00000359695 979 ntBASIC5.57□□□□□ -1.52
NPIPA3F8WFD2 SNORA70H-201ENST00000383910 135 ntBASIC5.57□□□□□ -1.52
NPIPA3F8WFD2 SNORA70J-201ENST00000384182 135 ntBASIC5.57□□□□□ -1.52
NPIPA3F8WFD2 NPM1P38-201ENST00000403835 865 ntBASIC5.57□□□□□ -1.52
NPIPA3F8WFD2 NAP1L4P2-201ENST00000425958 899 ntBASIC5.57□□□□□ -1.52
NPIPA3F8WFD2 SEPT14P12-201ENST00000442280 560 ntBASIC5.57□□□□□ -1.52
NPIPA3F8WFD2 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC5.57□□□□□ -1.52
NPIPA3F8WFD2 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC5.57□□□□□ -1.52
NPIPA3F8WFD2 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
NPIPA3F8WFD2 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC5.57□□□□□ -1.52
NPIPA3F8WFD2 AC104109.1-201ENST00000498563 436 ntBASIC5.57□□□□□ -1.52
NPIPA3F8WFD2 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC5.57□□□□□ -1.52
NPIPA3F8WFD2 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC5.57□□□□□ -1.52
NPIPA3F8WFD2 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC5.57□□□□□ -1.52
NPIPA3F8WFD2 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC5.57□□□□□ -1.52
NPIPA3F8WFD2 RPA2P3-201ENST00000533268 770 ntBASIC5.57□□□□□ -1.52
NPIPA3F8WFD2 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC5.57□□□□□ -1.52
NPIPA3F8WFD2 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC5.57□□□□□ -1.52
NPIPA3F8WFD2 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC5.57□□□□□ -1.52
NPIPA3F8WFD2 OR4H6P-201ENST00000563771 921 ntBASIC5.57□□□□□ -1.52
NPIPA3F8WFD2 LINC00556-201ENST00000569603 412 ntBASIC5.57□□□□□ -1.52
NPIPA3F8WFD2 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC5.57□□□□□ -1.52
NPIPA3F8WFD2 GMCL1P2-201ENST00000605230 823 ntBASIC5.57□□□□□ -1.52
NPIPA3F8WFD2 AL591167.1-201ENST00000607321 456 ntBASIC5.57□□□□□ -1.52
NPIPA3F8WFD2 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC5.57□□□□□ -1.52
NPIPA3F8WFD2 AL137246.2-201ENST00000613439 662 ntBASIC5.57□□□□□ -1.52
NPIPA3F8WFD2 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC5.57□□□□□ -1.52
NPIPA3F8WFD2 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC5.57□□□□□ -1.52
NPIPA3F8WFD2 AC022034.1-201ENST00000512867 2156 ntBASIC5.57□□□□□ -1.52
NPIPA3F8WFD2 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
NPIPA3F8WFD2 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
NPIPA3F8WFD2 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC5.57□□□□□ -1.52
NPIPA3F8WFD2 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
NPIPA3F8WFD2 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC5.57□□□□□ -1.52
NPIPA3F8WFD2 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
NPIPA3F8WFD2 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
NPIPA3F8WFD2 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
NPIPA3F8WFD2 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC5.56□□□□□ -1.52
NPIPA3F8WFD2 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
NPIPA3F8WFD2 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
NPIPA3F8WFD2 AP001541.1-201ENST00000623322 1904 ntBASIC5.56□□□□□ -1.52
NPIPA3F8WFD2 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
NPIPA3F8WFD2 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC5.56□□□□□ -1.52
NPIPA3F8WFD2 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC5.56□□□□□ -1.52
NPIPA3F8WFD2 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
NPIPA3F8WFD2 TTC41P-205ENST00000551270 3963 ntBASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 66.3 ms