Protein–RNA interactions for Protein: Q99624

SLC38A3, Sodium-coupled neutral amino acid transporter 3, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A3Q99624 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC19.11■□□□□ 0.65
SLC38A3Q99624 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SLC38A3Q99624 TSPY15P-201ENST00000457163 923 ntBASIC19.11■□□□□ 0.65
SLC38A3Q99624 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC19.11■□□□□ 0.65
SLC38A3Q99624 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
SLC38A3Q99624 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SLC38A3Q99624 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC19.11■□□□□ 0.65
SLC38A3Q99624 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC19.11■□□□□ 0.65
SLC38A3Q99624 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SLC38A3Q99624 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SLC38A3Q99624 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
SLC38A3Q99624 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SLC38A3Q99624 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SLC38A3Q99624 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
SLC38A3Q99624 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SLC38A3Q99624 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
SLC38A3Q99624 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SLC38A3Q99624 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SLC38A3Q99624 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SLC38A3Q99624 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC19.1■□□□□ 0.65
SLC38A3Q99624 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
SLC38A3Q99624 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC19.1■□□□□ 0.65
SLC38A3Q99624 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.1■□□□□ 0.65
SLC38A3Q99624 NIFKP9-201ENST00000419265 221 ntBASIC19.1■□□□□ 0.65
SLC38A3Q99624 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.1■□□□□ 0.65
SLC38A3Q99624 YBX1P10-201ENST00000444752 975 ntBASIC19.1■□□□□ 0.65
SLC38A3Q99624 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.1■□□□□ 0.65
SLC38A3Q99624 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
SLC38A3Q99624 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC19.1■□□□□ 0.65
SLC38A3Q99624 LINC01023-201ENST00000606054 436 ntBASIC19.1■□□□□ 0.65
SLC38A3Q99624 CR392000.1-201ENST00000624770 1228 ntBASIC19.1■□□□□ 0.65
SLC38A3Q99624 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SLC38A3Q99624 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC19.1■□□□□ 0.65
SLC38A3Q99624 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC19.1■□□□□ 0.65
SLC38A3Q99624 AL137060.1-201ENST00000618151 2648 ntBASIC19.1■□□□□ 0.65
SLC38A3Q99624 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SLC38A3Q99624 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SLC38A3Q99624 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.1■□□□□ 0.65
SLC38A3Q99624 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
SLC38A3Q99624 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
SLC38A3Q99624 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.1■□□□□ 0.65
SLC38A3Q99624 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC19.1■□□□□ 0.65
SLC38A3Q99624 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC19.1■□□□□ 0.65
SLC38A3Q99624 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
SLC38A3Q99624 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC19.09■□□□□ 0.65
SLC38A3Q99624 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC19.09■□□□□ 0.65
SLC38A3Q99624 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC19.09■□□□□ 0.65
SLC38A3Q99624 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
SLC38A3Q99624 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SLC38A3Q99624 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC19.09■□□□□ 0.65
SLC38A3Q99624 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SLC38A3Q99624 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SLC38A3Q99624 KSR1P1-201ENST00000446298 240 ntBASIC19.09■□□□□ 0.65
SLC38A3Q99624 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC19.09■□□□□ 0.65
SLC38A3Q99624 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC19.09■□□□□ 0.65
SLC38A3Q99624 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC19.09■□□□□ 0.65
SLC38A3Q99624 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC19.09■□□□□ 0.65
SLC38A3Q99624 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SLC38A3Q99624 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SLC38A3Q99624 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
SLC38A3Q99624 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SLC38A3Q99624 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SLC38A3Q99624 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SLC38A3Q99624 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
SLC38A3Q99624 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
SLC38A3Q99624 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SLC38A3Q99624 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC19.08■□□□□ 0.65
SLC38A3Q99624 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC19.08■□□□□ 0.65
SLC38A3Q99624 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
SLC38A3Q99624 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SLC38A3Q99624 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SLC38A3Q99624 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.65
SLC38A3Q99624 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SLC38A3Q99624 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SLC38A3Q99624 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SLC38A3Q99624 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SLC38A3Q99624 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC19.08■□□□□ 0.64
SLC38A3Q99624 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC19.08■□□□□ 0.64
SLC38A3Q99624 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC19.08■□□□□ 0.64
SLC38A3Q99624 TUBB8P6-201ENST00000436895 1288 ntBASIC19.08■□□□□ 0.64
SLC38A3Q99624 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC19.08■□□□□ 0.64
SLC38A3Q99624 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC19.08■□□□□ 0.64
SLC38A3Q99624 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC19.08■□□□□ 0.64
SLC38A3Q99624 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC19.08■□□□□ 0.64
SLC38A3Q99624 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC19.08■□□□□ 0.64
SLC38A3Q99624 KRT16P1-201ENST00000399124 1418 ntBASIC19.08■□□□□ 0.64
SLC38A3Q99624 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SLC38A3Q99624 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SLC38A3Q99624 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC19.07■□□□□ 0.64
SLC38A3Q99624 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SLC38A3Q99624 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SLC38A3Q99624 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC19.07■□□□□ 0.64
SLC38A3Q99624 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SLC38A3Q99624 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC19.07■□□□□ 0.64
SLC38A3Q99624 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC19.07■□□□□ 0.64
SLC38A3Q99624 NUDT16P1-203ENST00000513809 620 ntBASIC19.07■□□□□ 0.64
SLC38A3Q99624 AC133561.5-201ENST00000635547 218 ntBASIC19.07■□□□□ 0.64
SLC38A3Q99624 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SLC38A3Q99624 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SLC38A3Q99624 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms