Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smco3Q8BQM7 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smco3Q8BQM7 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Smco3Q8BQM7 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Smco3Q8BQM7 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smco3Q8BQM7 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smco3Q8BQM7 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smco3Q8BQM7 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC14.04□□□□□ -0.16
Smco3Q8BQM7 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smco3Q8BQM7 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Smco3Q8BQM7 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smco3Q8BQM7 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smco3Q8BQM7 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smco3Q8BQM7 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Smco3Q8BQM7 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC14.03□□□□□ -0.16
Smco3Q8BQM7 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC14.03□□□□□ -0.16
Smco3Q8BQM7 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Smco3Q8BQM7 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Smco3Q8BQM7 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC14.03□□□□□ -0.16
Smco3Q8BQM7 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smco3Q8BQM7 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC14.03□□□□□ -0.16
Smco3Q8BQM7 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smco3Q8BQM7 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC14.03□□□□□ -0.16
Smco3Q8BQM7 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smco3Q8BQM7 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smco3Q8BQM7 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smco3Q8BQM7 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Smco3Q8BQM7 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smco3Q8BQM7 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smco3Q8BQM7 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smco3Q8BQM7 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smco3Q8BQM7 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC14.03□□□□□ -0.16
Smco3Q8BQM7 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Smco3Q8BQM7 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Smco3Q8BQM7 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Smco3Q8BQM7 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC14.02□□□□□ -0.16
Smco3Q8BQM7 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Smco3Q8BQM7 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Smco3Q8BQM7 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Smco3Q8BQM7 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Smco3Q8BQM7 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Smco3Q8BQM7 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Smco3Q8BQM7 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Smco3Q8BQM7 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smco3Q8BQM7 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC14.02□□□□□ -0.17
Smco3Q8BQM7 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smco3Q8BQM7 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smco3Q8BQM7 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smco3Q8BQM7 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC14.02□□□□□ -0.17
Smco3Q8BQM7 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smco3Q8BQM7 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smco3Q8BQM7 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smco3Q8BQM7 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smco3Q8BQM7 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smco3Q8BQM7 Dancr-204ENSMUST00000132389 2347 ntBASIC14.02□□□□□ -0.17
Smco3Q8BQM7 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smco3Q8BQM7 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smco3Q8BQM7 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smco3Q8BQM7 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Smco3Q8BQM7 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smco3Q8BQM7 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smco3Q8BQM7 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Smco3Q8BQM7 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Smco3Q8BQM7 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Smco3Q8BQM7 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smco3Q8BQM7 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smco3Q8BQM7 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smco3Q8BQM7 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC14.01□□□□□ -0.17
Smco3Q8BQM7 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Smco3Q8BQM7 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Smco3Q8BQM7 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC14.01□□□□□ -0.17
Smco3Q8BQM7 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Smco3Q8BQM7 Gm14026-201ENSMUST00000120625 1789 ntBASIC14.01□□□□□ -0.17
Smco3Q8BQM7 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smco3Q8BQM7 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smco3Q8BQM7 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smco3Q8BQM7 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smco3Q8BQM7 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Smco3Q8BQM7 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Smco3Q8BQM7 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Smco3Q8BQM7 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
Smco3Q8BQM7 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Smco3Q8BQM7 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Smco3Q8BQM7 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC14□□□□□ -0.17
Smco3Q8BQM7 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Smco3Q8BQM7 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC14□□□□□ -0.17
Smco3Q8BQM7 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Smco3Q8BQM7 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Smco3Q8BQM7 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC14□□□□□ -0.17
Smco3Q8BQM7 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC14□□□□□ -0.17
Smco3Q8BQM7 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Smco3Q8BQM7 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC14□□□□□ -0.17
Smco3Q8BQM7 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Smco3Q8BQM7 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Smco3Q8BQM7 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC14□□□□□ -0.17
Smco3Q8BQM7 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Smco3Q8BQM7 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
Smco3Q8BQM7 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Smco3Q8BQM7 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Smco3Q8BQM7 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms