Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Six4Q61321 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Six4Q61321 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Six4Q61321 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Six4Q61321 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Six4Q61321 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Six4Q61321 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Six4Q61321 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Six4Q61321 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Six4Q61321 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Six4Q61321 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Six4Q61321 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Six4Q61321 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Six4Q61321 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Six4Q61321 Gm10231-201ENSMUST00000181584 441 ntBASIC17.1■□□□□ 0.33
Six4Q61321 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC17.1■□□□□ 0.33
Six4Q61321 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Six4Q61321 Gm10175-202ENSMUST00000208752 441 ntBASIC17.1■□□□□ 0.33
Six4Q61321 Gm7213-201ENSMUST00000215977 950 ntBASIC17.1■□□□□ 0.33
Six4Q61321 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC17.1■□□□□ 0.33
Six4Q61321 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC17.1■□□□□ 0.33
Six4Q61321 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Six4Q61321 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Six4Q61321 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Six4Q61321 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Six4Q61321 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Six4Q61321 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
Six4Q61321 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Six4Q61321 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Six4Q61321 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC17.1■□□□□ 0.33
Six4Q61321 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Six4Q61321 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Six4Q61321 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Six4Q61321 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Six4Q61321 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC17.09■□□□□ 0.33
Six4Q61321 Gm7292-201ENSMUST00000194706 2527 ntBASIC17.09■□□□□ 0.33
Six4Q61321 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Six4Q61321 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Six4Q61321 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Six4Q61321 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Six4Q61321 Gm13474-201ENSMUST00000122466 815 ntBASIC17.09■□□□□ 0.33
Six4Q61321 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Six4Q61321 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Six4Q61321 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Six4Q61321 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC17.09■□□□□ 0.33
Six4Q61321 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC17.09■□□□□ 0.33
Six4Q61321 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Six4Q61321 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Six4Q61321 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Six4Q61321 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Six4Q61321 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.33
Six4Q61321 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Six4Q61321 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
Six4Q61321 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Six4Q61321 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Six4Q61321 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Six4Q61321 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Six4Q61321 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Six4Q61321 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Six4Q61321 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Six4Q61321 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Six4Q61321 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Six4Q61321 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Six4Q61321 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Six4Q61321 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Six4Q61321 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Six4Q61321 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Six4Q61321 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Six4Q61321 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Six4Q61321 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Six4Q61321 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Six4Q61321 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Six4Q61321 Actl10-202ENSMUST00000226583 1501 ntBASIC17.07■□□□□ 0.32
Six4Q61321 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Six4Q61321 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Six4Q61321 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Six4Q61321 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Six4Q61321 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Six4Q61321 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC17.07■□□□□ 0.32
Six4Q61321 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Six4Q61321 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Six4Q61321 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC17.07■□□□□ 0.32
Six4Q61321 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Six4Q61321 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Six4Q61321 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Six4Q61321 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Six4Q61321 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Six4Q61321 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Six4Q61321 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Six4Q61321 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Six4Q61321 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC17.07■□□□□ 0.32
Six4Q61321 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Six4Q61321 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Six4Q61321 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Six4Q61321 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Six4Q61321 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Six4Q61321 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
Six4Q61321 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC17.06■□□□□ 0.32
Six4Q61321 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Six4Q61321 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 77.1 ms