Protein–RNA interactions for Protein: Q61009

Scarb1, Scavenger receptor class B member 1, mousemouse

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scarb1Q61009 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC14.34□□□□□ -0.11
Scarb1Q61009 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Scarb1Q61009 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Scarb1Q61009 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Scarb1Q61009 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Scarb1Q61009 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Scarb1Q61009 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Scarb1Q61009 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC14.34□□□□□ -0.11
Scarb1Q61009 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Scarb1Q61009 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Scarb1Q61009 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Scarb1Q61009 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.11
Scarb1Q61009 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC14.33□□□□□ -0.11
Scarb1Q61009 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
Scarb1Q61009 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Scarb1Q61009 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Scarb1Q61009 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
Scarb1Q61009 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Scarb1Q61009 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Scarb1Q61009 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Scarb1Q61009 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Scarb1Q61009 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Scarb1Q61009 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Scarb1Q61009 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC14.33□□□□□ -0.12
Scarb1Q61009 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Scarb1Q61009 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Scarb1Q61009 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Scarb1Q61009 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Scarb1Q61009 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Scarb1Q61009 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Scarb1Q61009 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Scarb1Q61009 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Scarb1Q61009 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Scarb1Q61009 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC14.33□□□□□ -0.12
Scarb1Q61009 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Scarb1Q61009 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Scarb1Q61009 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Scarb1Q61009 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Scarb1Q61009 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Scarb1Q61009 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Scarb1Q61009 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Scarb1Q61009 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Scarb1Q61009 Gm43272-201ENSMUST00000200599 1584 ntBASIC14.32□□□□□ -0.12
Scarb1Q61009 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Scarb1Q61009 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Scarb1Q61009 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC14.32□□□□□ -0.12
Scarb1Q61009 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Scarb1Q61009 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Scarb1Q61009 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Scarb1Q61009 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Scarb1Q61009 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Scarb1Q61009 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Scarb1Q61009 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Scarb1Q61009 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Scarb1Q61009 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Scarb1Q61009 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Scarb1Q61009 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Scarb1Q61009 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Scarb1Q61009 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Scarb1Q61009 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Scarb1Q61009 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Scarb1Q61009 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Scarb1Q61009 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Scarb1Q61009 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Scarb1Q61009 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC14.31□□□□□ -0.12
Scarb1Q61009 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Scarb1Q61009 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC14.31□□□□□ -0.12
Scarb1Q61009 Gm10033-202ENSMUST00000211874 928 ntBASIC14.31□□□□□ -0.12
Scarb1Q61009 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Scarb1Q61009 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Scarb1Q61009 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Scarb1Q61009 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Scarb1Q61009 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Scarb1Q61009 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Scarb1Q61009 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Scarb1Q61009 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Scarb1Q61009 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Scarb1Q61009 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Scarb1Q61009 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Scarb1Q61009 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Scarb1Q61009 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Scarb1Q61009 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Scarb1Q61009 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Scarb1Q61009 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Scarb1Q61009 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Scarb1Q61009 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Scarb1Q61009 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Scarb1Q61009 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Scarb1Q61009 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Scarb1Q61009 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Scarb1Q61009 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Scarb1Q61009 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Scarb1Q61009 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC14.3□□□□□ -0.12
Scarb1Q61009 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Scarb1Q61009 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC14.3□□□□□ -0.12
Scarb1Q61009 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Scarb1Q61009 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC14.3□□□□□ -0.12
Scarb1Q61009 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Scarb1Q61009 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Scarb1Q61009 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms