Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav15-1-dv6-1Q5R1D2 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Trav15-1-dv6-1Q5R1D2 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav15-1-dv6-1Q5R1D2 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav15-1-dv6-1Q5R1D2 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav15-1-dv6-1Q5R1D2 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav15-1-dv6-1Q5R1D2 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav15-1-dv6-1Q5R1D2 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav15-1-dv6-1Q5R1D2 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav15-1-dv6-1Q5R1D2 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav15-1-dv6-1Q5R1D2 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
Trav15-1-dv6-1Q5R1D2 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav15-1-dv6-1Q5R1D2 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav15-1-dv6-1Q5R1D2 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trav15-1-dv6-1Q5R1D2 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav15-1-dv6-1Q5R1D2 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav15-1-dv6-1Q5R1D2 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav15-1-dv6-1Q5R1D2 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trav15-1-dv6-1Q5R1D2 Flg-201ENSMUST00000050758 1488 ntBASIC13.23□□□□□ -0.29
Trav15-1-dv6-1Q5R1D2 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav15-1-dv6-1Q5R1D2 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trav15-1-dv6-1Q5R1D2 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav15-1-dv6-1Q5R1D2 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav15-1-dv6-1Q5R1D2 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC13.22□□□□□ -0.29
Trav15-1-dv6-1Q5R1D2 Gm5421-201ENSMUST00000181698 2354 ntBASIC13.22□□□□□ -0.29
Trav15-1-dv6-1Q5R1D2 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav15-1-dv6-1Q5R1D2 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Trav15-1-dv6-1Q5R1D2 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav15-1-dv6-1Q5R1D2 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav15-1-dv6-1Q5R1D2 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
Trav15-1-dv6-1Q5R1D2 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trav15-1-dv6-1Q5R1D2 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC13.22□□□□□ -0.29
Trav15-1-dv6-1Q5R1D2 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav15-1-dv6-1Q5R1D2 Wnt10b-205ENSMUST00000226846 1204 ntBASIC13.22□□□□□ -0.29
Trav15-1-dv6-1Q5R1D2 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav15-1-dv6-1Q5R1D2 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav15-1-dv6-1Q5R1D2 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav15-1-dv6-1Q5R1D2 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav15-1-dv6-1Q5R1D2 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav15-1-dv6-1Q5R1D2 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav15-1-dv6-1Q5R1D2 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav15-1-dv6-1Q5R1D2 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav15-1-dv6-1Q5R1D2 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav15-1-dv6-1Q5R1D2 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav15-1-dv6-1Q5R1D2 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav15-1-dv6-1Q5R1D2 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav15-1-dv6-1Q5R1D2 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC13.21□□□□□ -0.29
Trav15-1-dv6-1Q5R1D2 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav15-1-dv6-1Q5R1D2 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav15-1-dv6-1Q5R1D2 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav15-1-dv6-1Q5R1D2 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav15-1-dv6-1Q5R1D2 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC13.21□□□□□ -0.29
Trav15-1-dv6-1Q5R1D2 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Trav15-1-dv6-1Q5R1D2 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav15-1-dv6-1Q5R1D2 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav15-1-dv6-1Q5R1D2 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trav15-1-dv6-1Q5R1D2 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav15-1-dv6-1Q5R1D2 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trav15-1-dv6-1Q5R1D2 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trav15-1-dv6-1Q5R1D2 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav15-1-dv6-1Q5R1D2 Gm10493-201ENSMUST00000097270 612 ntBASIC13.21□□□□□ -0.29
Trav15-1-dv6-1Q5R1D2 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav15-1-dv6-1Q5R1D2 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav15-1-dv6-1Q5R1D2 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav15-1-dv6-1Q5R1D2 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trav15-1-dv6-1Q5R1D2 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav15-1-dv6-1Q5R1D2 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav15-1-dv6-1Q5R1D2 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC13.2□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC13.2□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 Gm11643-201ENSMUST00000119578 864 ntBASIC13.2□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC13.2□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms