Protein–RNA interactions for Protein: P62915

Gtf2b, Transcription initiation factor IIB, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf2bP62915 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Gtf2bP62915 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Gtf2bP62915 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Gtf2bP62915 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Gtf2bP62915 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Gtf2bP62915 Gm6190-201ENSMUST00000220683 1374 ntBASIC18.31■□□□□ 0.52
Gtf2bP62915 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Gtf2bP62915 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
Gtf2bP62915 Gm10013-201ENSMUST00000106074 672 ntBASIC18.31■□□□□ 0.52
Gtf2bP62915 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC18.31■□□□□ 0.52
Gtf2bP62915 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC18.31■□□□□ 0.52
Gtf2bP62915 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Gtf2bP62915 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Gtf2bP62915 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Gtf2bP62915 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Gtf2bP62915 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Gtf2bP62915 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Gtf2bP62915 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Gtf2bP62915 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Gtf2bP62915 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Gtf2bP62915 Phf7-203ENSMUST00000226565 1971 ntBASIC18.3■□□□□ 0.52
Gtf2bP62915 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Gtf2bP62915 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC18.3■□□□□ 0.52
Gtf2bP62915 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC18.3■□□□□ 0.52
Gtf2bP62915 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC18.3■□□□□ 0.52
Gtf2bP62915 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC18.3■□□□□ 0.52
Gtf2bP62915 Gm27389-201ENSMUST00000183622 195 ntBASIC18.3■□□□□ 0.52
Gtf2bP62915 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Gtf2bP62915 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Gtf2bP62915 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Gtf2bP62915 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC18.3■□□□□ 0.52
Gtf2bP62915 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Gtf2bP62915 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Gtf2bP62915 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC18.3■□□□□ 0.52
Gtf2bP62915 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC18.3■□□□□ 0.52
Gtf2bP62915 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Gtf2bP62915 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Gtf2bP62915 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Gtf2bP62915 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Gtf2bP62915 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Gtf2bP62915 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Gtf2bP62915 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Gtf2bP62915 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Gtf2bP62915 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Gtf2bP62915 Gm19439-201ENSMUST00000198195 2273 ntBASIC18.29■□□□□ 0.52
Gtf2bP62915 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC18.29■□□□□ 0.52
Gtf2bP62915 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Gtf2bP62915 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Gtf2bP62915 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Gtf2bP62915 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Gtf2bP62915 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Gtf2bP62915 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Gtf2bP62915 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC18.29■□□□□ 0.52
Gtf2bP62915 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Gtf2bP62915 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Gtf2bP62915 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Gtf2bP62915 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Gtf2bP62915 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Gtf2bP62915 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Gtf2bP62915 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Gtf2bP62915 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Gtf2bP62915 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Gtf2bP62915 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Gtf2bP62915 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Gtf2bP62915 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Gtf2bP62915 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Gtf2bP62915 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Gtf2bP62915 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Gtf2bP62915 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Gtf2bP62915 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Gtf2bP62915 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Gtf2bP62915 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Gtf2bP62915 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Gtf2bP62915 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC18.28■□□□□ 0.52
Gtf2bP62915 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Gtf2bP62915 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC18.28■□□□□ 0.52
Gtf2bP62915 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Gtf2bP62915 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Gtf2bP62915 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Gtf2bP62915 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Gtf2bP62915 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Gtf2bP62915 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Gtf2bP62915 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Gtf2bP62915 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC18.28■□□□□ 0.52
Gtf2bP62915 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC18.28■□□□□ 0.52
Gtf2bP62915 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Gtf2bP62915 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Gtf2bP62915 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Gtf2bP62915 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Gtf2bP62915 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Gtf2bP62915 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Gtf2bP62915 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Gtf2bP62915 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Gtf2bP62915 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
Gtf2bP62915 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Gtf2bP62915 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
Gtf2bP62915 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Gtf2bP62915 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Gtf2bP62915 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Gtf2bP62915 Gm18115-201ENSMUST00000221209 621 ntBASIC18.27■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms