Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Tpm1P58771 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Tpm1P58771 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Tpm1P58771 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
Tpm1P58771 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Tpm1P58771 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Tpm1P58771 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Tpm1P58771 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Tpm1P58771 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Tpm1P58771 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Tpm1P58771 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC18.95■□□□□ 0.62
Tpm1P58771 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Tpm1P58771 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Tpm1P58771 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Tpm1P58771 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Tpm1P58771 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Tpm1P58771 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC18.95■□□□□ 0.62
Tpm1P58771 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Tpm1P58771 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Tpm1P58771 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Tpm1P58771 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Tpm1P58771 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Tpm1P58771 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Tpm1P58771 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Tpm1P58771 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Tpm1P58771 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Tpm1P58771 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Tpm1P58771 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Tpm1P58771 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Tpm1P58771 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Tpm1P58771 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Tpm1P58771 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Tpm1P58771 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Tpm1P58771 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Tpm1P58771 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Tpm1P58771 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Tpm1P58771 Gm6211-202ENSMUST00000167849 925 ntBASIC18.94■□□□□ 0.62
Tpm1P58771 Gm44549-201ENSMUST00000208351 577 ntBASIC18.94■□□□□ 0.62
Tpm1P58771 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Tpm1P58771 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
Tpm1P58771 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Tpm1P58771 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Tpm1P58771 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Tpm1P58771 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Tpm1P58771 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Tpm1P58771 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Tpm1P58771 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Tpm1P58771 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Tpm1P58771 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Tpm1P58771 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Tpm1P58771 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Tpm1P58771 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Tpm1P58771 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Tpm1P58771 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Tpm1P58771 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC18.93■□□□□ 0.62
Tpm1P58771 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC18.93■□□□□ 0.62
Tpm1P58771 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Tpm1P58771 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Tpm1P58771 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC18.93■□□□□ 0.62
Tpm1P58771 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC18.93■□□□□ 0.62
Tpm1P58771 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Tpm1P58771 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Tpm1P58771 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Tpm1P58771 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Tpm1P58771 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC18.92■□□□□ 0.62
Tpm1P58771 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Tpm1P58771 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Tpm1P58771 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Tpm1P58771 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Tpm1P58771 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC18.92■□□□□ 0.62
Tpm1P58771 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
Tpm1P58771 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Tpm1P58771 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Tpm1P58771 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Tpm1P58771 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Tpm1P58771 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Tpm1P58771 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC18.92■□□□□ 0.62
Tpm1P58771 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC18.92■□□□□ 0.62
Tpm1P58771 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Tpm1P58771 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Tpm1P58771 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tpm1P58771 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tpm1P58771 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Tpm1P58771 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
Tpm1P58771 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tpm1P58771 Ptprs-211ENSMUST00000223859 5588 ntBASIC18.91■□□□□ 0.62
Tpm1P58771 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tpm1P58771 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tpm1P58771 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tpm1P58771 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tpm1P58771 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Tpm1P58771 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tpm1P58771 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tpm1P58771 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Tpm1P58771 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Tpm1P58771 Mir2861-201ENSMUST00000175539 82 ntBASIC18.91■□□□□ 0.62
Tpm1P58771 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC18.91■□□□□ 0.62
Tpm1P58771 Gm5874-201ENSMUST00000096101 508 ntBASIC18.91■□□□□ 0.62
Tpm1P58771 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tpm1P58771 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms