Protein–RNA interactions for Protein: P39749

Fen1, Flap endonuclease 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fen1P39749 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Fen1P39749 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Fen1P39749 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Fen1P39749 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Fen1P39749 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC17.1■□□□□ 0.33
Fen1P39749 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Fen1P39749 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Fen1P39749 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Fen1P39749 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC17.1■□□□□ 0.33
Fen1P39749 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Fen1P39749 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Fen1P39749 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Fen1P39749 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Fen1P39749 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC17.09■□□□□ 0.33
Fen1P39749 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Fen1P39749 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Fen1P39749 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Fen1P39749 Gm10418-201ENSMUST00000100943 576 ntBASIC17.09■□□□□ 0.33
Fen1P39749 Gm12933-201ENSMUST00000120203 872 ntBASIC17.09■□□□□ 0.33
Fen1P39749 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Fen1P39749 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Fen1P39749 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC17.09■□□□□ 0.33
Fen1P39749 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Fen1P39749 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Fen1P39749 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Fen1P39749 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Fen1P39749 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Fen1P39749 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Fen1P39749 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Fen1P39749 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Fen1P39749 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Fen1P39749 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC17.08■□□□□ 0.33
Fen1P39749 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Fen1P39749 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Fen1P39749 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Fen1P39749 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Fen1P39749 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Fen1P39749 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC17.08■□□□□ 0.32
Fen1P39749 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Fen1P39749 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Fen1P39749 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Fen1P39749 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Fen1P39749 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Fen1P39749 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Fen1P39749 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Fen1P39749 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Fen1P39749 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Fen1P39749 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Fen1P39749 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC17.07■□□□□ 0.32
Fen1P39749 Gm43272-201ENSMUST00000200599 1584 ntBASIC17.07■□□□□ 0.32
Fen1P39749 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Fen1P39749 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Fen1P39749 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Fen1P39749 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Fen1P39749 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Fen1P39749 Zfp783-201ENSMUST00000095946 670 ntBASIC17.07■□□□□ 0.32
Fen1P39749 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Fen1P39749 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Fen1P39749 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Fen1P39749 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC17.07■□□□□ 0.32
Fen1P39749 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Fen1P39749 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Fen1P39749 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Fen1P39749 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Fen1P39749 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Fen1P39749 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Fen1P39749 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Fen1P39749 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC17.06■□□□□ 0.32
Fen1P39749 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Fen1P39749 Gm27011-201ENSMUST00000182352 972 ntBASIC17.06■□□□□ 0.32
Fen1P39749 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC17.06■□□□□ 0.32
Fen1P39749 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Fen1P39749 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Fen1P39749 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Fen1P39749 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Fen1P39749 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Fen1P39749 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
Fen1P39749 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Fen1P39749 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Fen1P39749 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Fen1P39749 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
Fen1P39749 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Fen1P39749 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Fen1P39749 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Fen1P39749 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Fen1P39749 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Fen1P39749 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
Fen1P39749 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Fen1P39749 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Fen1P39749 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Fen1P39749 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Fen1P39749 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Fen1P39749 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Fen1P39749 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Fen1P39749 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Fen1P39749 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Fen1P39749 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Fen1P39749 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Fen1P39749 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Fen1P39749 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms