Protein–RNA interactions for Protein: O88597

Becn1, Beclin-1, mousemouse

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Becn1O88597 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Becn1O88597 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Becn1O88597 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Becn1O88597 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Becn1O88597 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Becn1O88597 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Becn1O88597 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Becn1O88597 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Becn1O88597 Gm10655-201ENSMUST00000098658 1397 ntBASIC19.45■□□□□ 0.7
Becn1O88597 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Becn1O88597 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Becn1O88597 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Becn1O88597 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Becn1O88597 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Becn1O88597 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC19.45■□□□□ 0.7
Becn1O88597 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Becn1O88597 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Becn1O88597 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Becn1O88597 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Becn1O88597 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Becn1O88597 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Becn1O88597 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Becn1O88597 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Becn1O88597 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Becn1O88597 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Becn1O88597 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Becn1O88597 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Becn1O88597 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Becn1O88597 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Becn1O88597 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Becn1O88597 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Becn1O88597 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Becn1O88597 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Becn1O88597 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Becn1O88597 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Becn1O88597 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Becn1O88597 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Becn1O88597 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Becn1O88597 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Becn1O88597 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Becn1O88597 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Becn1O88597 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Becn1O88597 Nespas-201ENSMUST00000143738 1083 ntBASIC19.43■□□□□ 0.7
Becn1O88597 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
Becn1O88597 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Becn1O88597 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Becn1O88597 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
Becn1O88597 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Becn1O88597 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Becn1O88597 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Becn1O88597 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Becn1O88597 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Becn1O88597 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Becn1O88597 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Becn1O88597 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Becn1O88597 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC19.42■□□□□ 0.7
Becn1O88597 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Becn1O88597 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Becn1O88597 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Becn1O88597 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC19.42■□□□□ 0.7
Becn1O88597 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Becn1O88597 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Becn1O88597 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Becn1O88597 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Becn1O88597 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Becn1O88597 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Becn1O88597 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Becn1O88597 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC19.42■□□□□ 0.7
Becn1O88597 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Becn1O88597 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Becn1O88597 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Becn1O88597 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Becn1O88597 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Becn1O88597 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Becn1O88597 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC19.41■□□□□ 0.7
Becn1O88597 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Becn1O88597 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Becn1O88597 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Becn1O88597 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Becn1O88597 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Becn1O88597 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Becn1O88597 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Becn1O88597 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Becn1O88597 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
Becn1O88597 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Becn1O88597 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC19.41■□□□□ 0.7
Becn1O88597 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Becn1O88597 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Becn1O88597 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Becn1O88597 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Becn1O88597 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Becn1O88597 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Becn1O88597 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Becn1O88597 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Becn1O88597 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Becn1O88597 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Becn1O88597 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC19.4■□□□□ 0.7
Becn1O88597 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC19.4■□□□□ 0.7
Becn1O88597 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC19.4■□□□□ 0.7
Becn1O88597 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms