Protein–RNA interactions for Protein: O88456

Capns1, Calpain small subunit 1, mousemouse

Predictions only

Length 269 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Capns1O88456 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Capns1O88456 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Capns1O88456 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Capns1O88456 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Capns1O88456 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC15.7■□□□□ 0.1
Capns1O88456 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Capns1O88456 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Capns1O88456 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Capns1O88456 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Capns1O88456 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Capns1O88456 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Capns1O88456 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Capns1O88456 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Capns1O88456 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Capns1O88456 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC15.69■□□□□ 0.1
Capns1O88456 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Capns1O88456 Gm27275-201ENSMUST00000184318 272 ntBASIC15.69■□□□□ 0.1
Capns1O88456 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Capns1O88456 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Capns1O88456 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Capns1O88456 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Capns1O88456 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Capns1O88456 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Capns1O88456 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC15.69■□□□□ 0.1
Capns1O88456 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Capns1O88456 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
Capns1O88456 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Capns1O88456 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Capns1O88456 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Capns1O88456 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Capns1O88456 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Capns1O88456 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Capns1O88456 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Capns1O88456 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Capns1O88456 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Capns1O88456 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Capns1O88456 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Capns1O88456 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Capns1O88456 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Capns1O88456 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Capns1O88456 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Capns1O88456 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC15.68■□□□□ 0.1
Capns1O88456 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Capns1O88456 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC15.68■□□□□ 0.1
Capns1O88456 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Capns1O88456 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC15.68■□□□□ 0.1
Capns1O88456 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
Capns1O88456 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Capns1O88456 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Capns1O88456 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Capns1O88456 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Capns1O88456 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC15.68■□□□□ 0.1
Capns1O88456 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Capns1O88456 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Capns1O88456 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Capns1O88456 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Capns1O88456 Gm26596-201ENSMUST00000180464 2655 ntBASIC15.68■□□□□ 0.1
Capns1O88456 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Capns1O88456 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Capns1O88456 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Capns1O88456 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Capns1O88456 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Capns1O88456 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Capns1O88456 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Capns1O88456 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Capns1O88456 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC15.67■□□□□ 0.1
Capns1O88456 Krtap5-1-202ENSMUST00000188274 742 ntBASIC15.67■□□□□ 0.1
Capns1O88456 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Capns1O88456 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Capns1O88456 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Capns1O88456 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Capns1O88456 Gm16499-203ENSMUST00000204633 2177 ntBASIC15.66■□□□□ 0.1
Capns1O88456 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Capns1O88456 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
Capns1O88456 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Capns1O88456 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Capns1O88456 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC15.66■□□□□ 0.1
Capns1O88456 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Capns1O88456 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC15.66■□□□□ 0.1
Capns1O88456 Gm37820-201ENSMUST00000194021 2147 ntBASIC15.66■□□□□ 0.1
Capns1O88456 Arhgef33-211ENSMUST00000225658 473 ntBASIC15.66■□□□□ 0.1
Capns1O88456 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Capns1O88456 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Capns1O88456 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Capns1O88456 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Capns1O88456 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Capns1O88456 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Capns1O88456 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Capns1O88456 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Capns1O88456 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Capns1O88456 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Capns1O88456 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Capns1O88456 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
Capns1O88456 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Capns1O88456 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Capns1O88456 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Capns1O88456 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Capns1O88456 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Capns1O88456 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Capns1O88456 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms