Protein–RNA interactions for Protein: O09111

Ndufb11, NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 11, mitochondrial, mousemouse

Predictions only

Length 151 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndufb11O09111 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ndufb11O09111 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ndufb11O09111 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC13.67□□□□□ -0.22
Ndufb11O09111 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ndufb11O09111 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ndufb11O09111 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ndufb11O09111 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ndufb11O09111 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC13.67□□□□□ -0.22
Ndufb11O09111 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ndufb11O09111 Mir8112-201ENSMUST00000184382 131 ntBASIC13.67□□□□□ -0.22
Ndufb11O09111 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ndufb11O09111 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ndufb11O09111 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Ndufb11O09111 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC13.67□□□□□ -0.22
Ndufb11O09111 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ndufb11O09111 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Ndufb11O09111 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ndufb11O09111 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ndufb11O09111 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ndufb11O09111 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ndufb11O09111 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ndufb11O09111 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ndufb11O09111 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ndufb11O09111 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ndufb11O09111 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ndufb11O09111 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Ndufb11O09111 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ndufb11O09111 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ndufb11O09111 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC13.67□□□□□ -0.22
Ndufb11O09111 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ndufb11O09111 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC13.66□□□□□ -0.22
Ndufb11O09111 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ndufb11O09111 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ndufb11O09111 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ndufb11O09111 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ndufb11O09111 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ndufb11O09111 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ndufb11O09111 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ndufb11O09111 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ndufb11O09111 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ndufb11O09111 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ndufb11O09111 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ndufb11O09111 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC13.66□□□□□ -0.22
Ndufb11O09111 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ndufb11O09111 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ndufb11O09111 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ndufb11O09111 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ndufb11O09111 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ndufb11O09111 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ndufb11O09111 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ndufb11O09111 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ndufb11O09111 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ndufb11O09111 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC13.66□□□□□ -0.22
Ndufb11O09111 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ndufb11O09111 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ndufb11O09111 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ndufb11O09111 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ndufb11O09111 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ndufb11O09111 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ndufb11O09111 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ndufb11O09111 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
Ndufb11O09111 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Ndufb11O09111 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
Ndufb11O09111 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ndufb11O09111 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ndufb11O09111 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC13.65□□□□□ -0.22
Ndufb11O09111 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC13.65□□□□□ -0.22
Ndufb11O09111 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC13.65□□□□□ -0.22
Ndufb11O09111 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ndufb11O09111 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ndufb11O09111 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ndufb11O09111 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ndufb11O09111 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC13.65□□□□□ -0.22
Ndufb11O09111 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ndufb11O09111 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ndufb11O09111 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ndufb11O09111 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC13.65□□□□□ -0.22
Ndufb11O09111 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ndufb11O09111 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Ndufb11O09111 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ndufb11O09111 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ndufb11O09111 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ndufb11O09111 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ndufb11O09111 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ndufb11O09111 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ndufb11O09111 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ndufb11O09111 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ndufb11O09111 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ndufb11O09111 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ndufb11O09111 Ntrk2-205ENSMUST00000224402 2284 ntBASIC13.64□□□□□ -0.23
Ndufb11O09111 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ndufb11O09111 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ndufb11O09111 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Ndufb11O09111 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC13.64□□□□□ -0.23
Ndufb11O09111 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ndufb11O09111 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Ndufb11O09111 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ndufb11O09111 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ndufb11O09111 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ndufb11O09111 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms