Protein–RNA interactions for Protein: A0A0B4J1P5

Trbv26, T cell receptor beta, variable 26 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv26A0A0B4J1P5 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv26A0A0B4J1P5 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Trbv26A0A0B4J1P5 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC14.15□□□□□ -0.14
Trbv26A0A0B4J1P5 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv26A0A0B4J1P5 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC14.15□□□□□ -0.14
Trbv26A0A0B4J1P5 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Trbv26A0A0B4J1P5 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv26A0A0B4J1P5 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC14.15□□□□□ -0.14
Trbv26A0A0B4J1P5 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv26A0A0B4J1P5 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv26A0A0B4J1P5 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC14.15□□□□□ -0.14
Trbv26A0A0B4J1P5 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv26A0A0B4J1P5 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv26A0A0B4J1P5 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv26A0A0B4J1P5 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC14.15□□□□□ -0.14
Trbv26A0A0B4J1P5 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv26A0A0B4J1P5 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv26A0A0B4J1P5 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv26A0A0B4J1P5 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv26A0A0B4J1P5 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Trbv26A0A0B4J1P5 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC14.14□□□□□ -0.15
Trbv26A0A0B4J1P5 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Trbv26A0A0B4J1P5 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv26A0A0B4J1P5 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv26A0A0B4J1P5 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv26A0A0B4J1P5 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC14.14□□□□□ -0.15
Trbv26A0A0B4J1P5 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv26A0A0B4J1P5 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv26A0A0B4J1P5 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv26A0A0B4J1P5 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv26A0A0B4J1P5 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Trbv26A0A0B4J1P5 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC14.14□□□□□ -0.15
Trbv26A0A0B4J1P5 Gm43353-201ENSMUST00000199224 1295 ntBASIC14.14□□□□□ -0.15
Trbv26A0A0B4J1P5 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv26A0A0B4J1P5 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv26A0A0B4J1P5 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC14.14□□□□□ -0.15
Trbv26A0A0B4J1P5 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Trbv26A0A0B4J1P5 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv26A0A0B4J1P5 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv26A0A0B4J1P5 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trbv26A0A0B4J1P5 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC14.13□□□□□ -0.15
Trbv26A0A0B4J1P5 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trbv26A0A0B4J1P5 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trbv26A0A0B4J1P5 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Trbv26A0A0B4J1P5 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC14.13□□□□□ -0.15
Trbv26A0A0B4J1P5 Gm17661-201ENSMUST00000170317 270 ntBASIC14.13□□□□□ -0.15
Trbv26A0A0B4J1P5 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Trbv26A0A0B4J1P5 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC14.13□□□□□ -0.15
Trbv26A0A0B4J1P5 Mir7071-201ENSMUST00000184847 69 ntBASIC14.13□□□□□ -0.15
Trbv26A0A0B4J1P5 AC153881.2-201ENSMUST00000214877 204 ntBASIC14.13□□□□□ -0.15
Trbv26A0A0B4J1P5 AC159205.6-201ENSMUST00000224935 887 ntBASIC14.13□□□□□ -0.15
Trbv26A0A0B4J1P5 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trbv26A0A0B4J1P5 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trbv26A0A0B4J1P5 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Trbv26A0A0B4J1P5 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trbv26A0A0B4J1P5 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trbv26A0A0B4J1P5 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC14.13□□□□□ -0.15
Trbv26A0A0B4J1P5 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trbv26A0A0B4J1P5 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC14.13□□□□□ -0.15
Trbv26A0A0B4J1P5 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trbv26A0A0B4J1P5 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Trbv26A0A0B4J1P5 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trbv26A0A0B4J1P5 Gm44832-201ENSMUST00000208849 2303 ntBASIC14.13□□□□□ -0.15
Trbv26A0A0B4J1P5 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trbv26A0A0B4J1P5 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trbv26A0A0B4J1P5 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trbv26A0A0B4J1P5 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trbv26A0A0B4J1P5 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trbv26A0A0B4J1P5 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC14.12□□□□□ -0.15
Trbv26A0A0B4J1P5 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Trbv26A0A0B4J1P5 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trbv26A0A0B4J1P5 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trbv26A0A0B4J1P5 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC14.12□□□□□ -0.15
Trbv26A0A0B4J1P5 Krtap5-1-202ENSMUST00000188274 742 ntBASIC14.12□□□□□ -0.15
Trbv26A0A0B4J1P5 Gm43799-201ENSMUST00000201845 579 ntBASIC14.12□□□□□ -0.15
Trbv26A0A0B4J1P5 Gm7791-201ENSMUST00000219066 539 ntBASIC14.12□□□□□ -0.15
Trbv26A0A0B4J1P5 AC120002.2-201ENSMUST00000220205 773 ntBASIC14.12□□□□□ -0.15
Trbv26A0A0B4J1P5 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Trbv26A0A0B4J1P5 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trbv26A0A0B4J1P5 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Trbv26A0A0B4J1P5 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trbv26A0A0B4J1P5 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trbv26A0A0B4J1P5 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trbv26A0A0B4J1P5 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC14.12□□□□□ -0.15
Trbv26A0A0B4J1P5 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trbv26A0A0B4J1P5 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
Trbv26A0A0B4J1P5 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trbv26A0A0B4J1P5 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trbv26A0A0B4J1P5 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trbv26A0A0B4J1P5 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trbv26A0A0B4J1P5 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC14.11□□□□□ -0.15
Trbv26A0A0B4J1P5 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trbv26A0A0B4J1P5 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trbv26A0A0B4J1P5 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trbv26A0A0B4J1P5 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trbv26A0A0B4J1P5 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trbv26A0A0B4J1P5 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC14.11□□□□□ -0.15
Trbv26A0A0B4J1P5 Gm11539-201ENSMUST00000119837 557 ntBASIC14.11□□□□□ -0.15
Trbv26A0A0B4J1P5 Gm13436-201ENSMUST00000120418 567 ntBASIC14.11□□□□□ -0.15
Trbv26A0A0B4J1P5 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms