Protein–RNA interactions for Protein: A0A0A6YWV4

Trbc1, T cell receptor beta, constant region 1 (Fragment), mousemouse

Predictions only

Length 173 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbc1A0A0A6YWV4 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC15.59■□□□□ 0.09
Trbc1A0A0A6YWV4 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trbc1A0A0A6YWV4 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trbc1A0A0A6YWV4 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trbc1A0A0A6YWV4 Gm19721-201ENSMUST00000195284 1764 ntBASIC15.59■□□□□ 0.09
Trbc1A0A0A6YWV4 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trbc1A0A0A6YWV4 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trbc1A0A0A6YWV4 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trbc1A0A0A6YWV4 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trbc1A0A0A6YWV4 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trbc1A0A0A6YWV4 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trbc1A0A0A6YWV4 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trbc1A0A0A6YWV4 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trbc1A0A0A6YWV4 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trbc1A0A0A6YWV4 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trbc1A0A0A6YWV4 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trbc1A0A0A6YWV4 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Trbc1A0A0A6YWV4 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trbc1A0A0A6YWV4 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
Trbc1A0A0A6YWV4 Gm13559-201ENSMUST00000120476 863 ntBASIC15.58■□□□□ 0.08
Trbc1A0A0A6YWV4 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Trbc1A0A0A6YWV4 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC15.58■□□□□ 0.08
Trbc1A0A0A6YWV4 Gm9731-201ENSMUST00000209480 747 ntBASIC15.58■□□□□ 0.08
Trbc1A0A0A6YWV4 AC153881.2-201ENSMUST00000214877 204 ntBASIC15.58■□□□□ 0.08
Trbc1A0A0A6YWV4 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trbc1A0A0A6YWV4 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trbc1A0A0A6YWV4 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Trbc1A0A0A6YWV4 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trbc1A0A0A6YWV4 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
Trbc1A0A0A6YWV4 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trbc1A0A0A6YWV4 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Trbc1A0A0A6YWV4 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trbc1A0A0A6YWV4 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC15.57■□□□□ 0.08
Trbc1A0A0A6YWV4 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trbc1A0A0A6YWV4 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trbc1A0A0A6YWV4 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trbc1A0A0A6YWV4 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Trbc1A0A0A6YWV4 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trbc1A0A0A6YWV4 Gm17661-201ENSMUST00000170317 270 ntBASIC15.57■□□□□ 0.08
Trbc1A0A0A6YWV4 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trbc1A0A0A6YWV4 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trbc1A0A0A6YWV4 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trbc1A0A0A6YWV4 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trbc1A0A0A6YWV4 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trbc1A0A0A6YWV4 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trbc1A0A0A6YWV4 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trbc1A0A0A6YWV4 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trbc1A0A0A6YWV4 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trbc1A0A0A6YWV4 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Trbc1A0A0A6YWV4 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC15.57■□□□□ 0.08
Trbc1A0A0A6YWV4 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trbc1A0A0A6YWV4 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trbc1A0A0A6YWV4 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trbc1A0A0A6YWV4 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trbc1A0A0A6YWV4 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trbc1A0A0A6YWV4 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC15.56■□□□□ 0.08
Trbc1A0A0A6YWV4 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC15.56■□□□□ 0.08
Trbc1A0A0A6YWV4 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trbc1A0A0A6YWV4 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trbc1A0A0A6YWV4 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trbc1A0A0A6YWV4 Gm6433-201ENSMUST00000118634 875 ntBASIC15.56■□□□□ 0.08
Trbc1A0A0A6YWV4 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC15.56■□□□□ 0.08
Trbc1A0A0A6YWV4 Gm43353-201ENSMUST00000199224 1295 ntBASIC15.56■□□□□ 0.08
Trbc1A0A0A6YWV4 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trbc1A0A0A6YWV4 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trbc1A0A0A6YWV4 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trbc1A0A0A6YWV4 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Trbc1A0A0A6YWV4 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trbc1A0A0A6YWV4 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trbc1A0A0A6YWV4 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trbc1A0A0A6YWV4 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trbc1A0A0A6YWV4 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trbc1A0A0A6YWV4 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trbc1A0A0A6YWV4 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trbc1A0A0A6YWV4 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trbc1A0A0A6YWV4 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trbc1A0A0A6YWV4 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trbc1A0A0A6YWV4 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trbc1A0A0A6YWV4 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trbc1A0A0A6YWV4 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trbc1A0A0A6YWV4 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC15.55■□□□□ 0.08
Trbc1A0A0A6YWV4 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC15.55■□□□□ 0.08
Trbc1A0A0A6YWV4 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC15.55■□□□□ 0.08
Trbc1A0A0A6YWV4 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trbc1A0A0A6YWV4 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trbc1A0A0A6YWV4 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Trbc1A0A0A6YWV4 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trbc1A0A0A6YWV4 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trbc1A0A0A6YWV4 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trbc1A0A0A6YWV4 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trbc1A0A0A6YWV4 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trbc1A0A0A6YWV4 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trbc1A0A0A6YWV4 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trbc1A0A0A6YWV4 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trbc1A0A0A6YWV4 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC15.55■□□□□ 0.08
Trbc1A0A0A6YWV4 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trbc1A0A0A6YWV4 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC15.54■□□□□ 0.08
Trbc1A0A0A6YWV4 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trbc1A0A0A6YWV4 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trbc1A0A0A6YWV4 Gm8668-201ENSMUST00000120559 1447 ntBASIC15.54■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms