Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 ZNF790-206ENST00000613249 2183 ntAPPRIS P1 TSL 4 BASIC6.17□□□□□ -1.42
SEC61A2Q9H9S3 NFIB-221ENST00000637742 2166 ntTSL 5 BASIC6.17□□□□□ -1.42
SEC61A2Q9H9S3 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SEC61A2Q9H9S3 RBPJ-214ENST00000507561 1689 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
SEC61A2Q9H9S3 MR1-209ENST00000617803 7584 ntTSL 5 BASIC6.17□□□□□ -1.42
SEC61A2Q9H9S3 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
SEC61A2Q9H9S3 EEF1A1P28-201ENST00000450915 1403 ntBASIC6.16□□□□□ -1.42
SEC61A2Q9H9S3 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
SEC61A2Q9H9S3 AC110597.1-201ENST00000562669 3176 ntBASIC6.16□□□□□ -1.42
SEC61A2Q9H9S3 AC007938.1-201ENST00000562524 2902 ntBASIC6.16□□□□□ -1.42
SEC61A2Q9H9S3 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC6.16□□□□□ -1.42
SEC61A2Q9H9S3 HEPH-203ENST00000419594 3694 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
SEC61A2Q9H9S3 ADGRE1-203ENST00000381404 3056 ntTSL 2 BASIC6.16□□□□□ -1.42
SEC61A2Q9H9S3 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
SEC61A2Q9H9S3 CSDE1-204ENST00000369530 3774 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
SEC61A2Q9H9S3 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
SEC61A2Q9H9S3 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
SEC61A2Q9H9S3 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC6.16□□□□□ -1.42
SEC61A2Q9H9S3 ATP6V0E1-201ENST00000265093 773 ntTSL 2 BASIC6.16□□□□□ -1.42
SEC61A2Q9H9S3 OR4K1-201ENST00000285600 1076 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
SEC61A2Q9H9S3 RPL12P13-201ENST00000310055 497 ntBASIC6.16□□□□□ -1.42
SEC61A2Q9H9S3 MAPK14-203ENST00000310795 1066 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
SEC61A2Q9H9S3 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
SEC61A2Q9H9S3 RNA5SP429-201ENST00000363688 109 ntBASIC6.16□□□□□ -1.42
SEC61A2Q9H9S3 DEFB121-202ENST00000376314 389 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
SEC61A2Q9H9S3 GSTA8P-201ENST00000404253 637 ntBASIC6.16□□□□□ -1.42
SEC61A2Q9H9S3 FCF1P5-201ENST00000406490 482 ntBASIC6.16□□□□□ -1.42
SEC61A2Q9H9S3 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC6.16□□□□□ -1.42
SEC61A2Q9H9S3 PLGLB1-202ENST00000409310 960 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
SEC61A2Q9H9S3 AC068138.1-201ENST00000412635 217 ntBASIC6.16□□□□□ -1.42
SEC61A2Q9H9S3 AF274854.1-201ENST00000413236 615 ntBASIC6.16□□□□□ -1.42
SEC61A2Q9H9S3 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC6.16□□□□□ -1.42
SEC61A2Q9H9S3 AC073115.2-201ENST00000416708 555 ntTSL 4 BASIC6.16□□□□□ -1.42
SEC61A2Q9H9S3 AC009229.2-201ENST00000417213 351 ntTSL 3 BASIC6.16□□□□□ -1.42
SEC61A2Q9H9S3 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
SEC61A2Q9H9S3 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC6.16□□□□□ -1.42
SEC61A2Q9H9S3 AL606804.1-201ENST00000435333 538 ntTSL 3 BASIC6.16□□□□□ -1.42
SEC61A2Q9H9S3 BX005266.3-201ENST00000443013 1075 ntBASIC6.16□□□□□ -1.42
SEC61A2Q9H9S3 SEPT7P2-208ENST00000444755 505 ntTSL 3 BASIC6.16□□□□□ -1.42
SEC61A2Q9H9S3 AL589880.1-201ENST00000448271 287 ntBASIC6.16□□□□□ -1.42
SEC61A2Q9H9S3 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
SEC61A2Q9H9S3 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC6.16□□□□□ -1.42
SEC61A2Q9H9S3 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC6.16□□□□□ -1.42
SEC61A2Q9H9S3 AL391863.1-202ENST00000457427 612 ntTSL 5 BASIC6.16□□□□□ -1.42
SEC61A2Q9H9S3 AC096743.1-201ENST00000485172 319 ntBASIC6.16□□□□□ -1.42
SEC61A2Q9H9S3 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC6.16□□□□□ -1.42
SEC61A2Q9H9S3 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC6.16□□□□□ -1.42
SEC61A2Q9H9S3 AC002401.2-201ENST00000511361 430 ntTSL 3 BASIC6.16□□□□□ -1.42
SEC61A2Q9H9S3 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC6.16□□□□□ -1.42
SEC61A2Q9H9S3 RNU6-943P-201ENST00000516960 98 ntBASIC6.16□□□□□ -1.42
SEC61A2Q9H9S3 AC067904.2-201ENST00000517322 1283 ntBASIC6.16□□□□□ -1.42
SEC61A2Q9H9S3 AC104109.4-202ENST00000518409 1082 ntTSL 2 BASIC6.16□□□□□ -1.42
SEC61A2Q9H9S3 RPL12P22-201ENST00000519073 490 ntBASIC6.16□□□□□ -1.42
SEC61A2Q9H9S3 AC090193.1-202ENST00000524355 566 ntTSL 4 BASIC6.16□□□□□ -1.42
SEC61A2Q9H9S3 OR5M6P-201ENST00000530227 937 ntBASIC6.16□□□□□ -1.42
SEC61A2Q9H9S3 AC022880.1-201ENST00000534017 973 ntBASIC6.16□□□□□ -1.42
SEC61A2Q9H9S3 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC6.16□□□□□ -1.42
SEC61A2Q9H9S3 AC104229.1-201ENST00000561364 255 ntBASIC6.16□□□□□ -1.42
SEC61A2Q9H9S3 AGGF1P8-201ENST00000562979 1000 ntBASIC6.16□□□□□ -1.42
SEC61A2Q9H9S3 AC023813.2-201ENST00000564321 469 ntBASIC6.16□□□□□ -1.42
SEC61A2Q9H9S3 AC090286.3-201ENST00000573133 187 ntBASIC6.16□□□□□ -1.42
SEC61A2Q9H9S3 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC6.16□□□□□ -1.42
SEC61A2Q9H9S3 MTATP6P3-201ENST00000581686 676 ntBASIC6.16□□□□□ -1.42
SEC61A2Q9H9S3 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC6.16□□□□□ -1.42
SEC61A2Q9H9S3 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC6.16□□□□□ -1.42
SEC61A2Q9H9S3 AC008752.2-201ENST00000591174 750 ntTSL 3 BASIC6.16□□□□□ -1.42
SEC61A2Q9H9S3 MIR7515HG-250ENST00000592565 856 ntTSL 5 BASIC6.16□□□□□ -1.42
SEC61A2Q9H9S3 MTND3P19-201ENST00000603825 345 ntBASIC6.16□□□□□ -1.42
SEC61A2Q9H9S3 AL035411.2-201ENST00000604022 421 ntBASIC6.16□□□□□ -1.42
SEC61A2Q9H9S3 AC024085.1-201ENST00000604299 432 ntBASIC6.16□□□□□ -1.42
SEC61A2Q9H9S3 AP002360.4-201ENST00000606980 481 ntBASIC6.16□□□□□ -1.42
SEC61A2Q9H9S3 LIPF-205ENST00000608620 1290 ntTSL 2 BASIC6.16□□□□□ -1.42
SEC61A2Q9H9S3 AC245407.2-201ENST00000614199 451 ntBASIC6.16□□□□□ -1.42
SEC61A2Q9H9S3 RN7SL126P-201ENST00000616400 299 ntBASIC6.16□□□□□ -1.42
SEC61A2Q9H9S3 AC116165.2-201ENST00000616705 206 ntBASIC6.16□□□□□ -1.42
SEC61A2Q9H9S3 PPP3CB-AS1-215ENST00000620559 656 ntTSL 5 BASIC6.16□□□□□ -1.42
SEC61A2Q9H9S3 AC087894.3-201ENST00000623682 349 ntBASIC6.16□□□□□ -1.42
SEC61A2Q9H9S3 AC034229.6-201ENST00000623704 224 ntBASIC6.16□□□□□ -1.42
SEC61A2Q9H9S3 AC018659.2-201ENST00000624690 715 ntBASIC6.16□□□□□ -1.42
SEC61A2Q9H9S3 JAKMIP2-AS1-202ENST00000627433 831 ntTSL 3 BASIC6.16□□□□□ -1.42
SEC61A2Q9H9S3 GMFB-210ENST00000628554 639 ntTSL 4 BASIC6.16□□□□□ -1.42
SEC61A2Q9H9S3 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC6.16□□□□□ -1.42
SEC61A2Q9H9S3 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC6.16□□□□□ -1.42
SEC61A2Q9H9S3 LINC02249-202ENST00000562624 4260 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
SEC61A2Q9H9S3 AC104446.1-201ENST00000613728 1321 ntBASIC6.16□□□□□ -1.42
SEC61A2Q9H9S3 AC008432.1-201ENST00000615912 1320 ntBASIC6.16□□□□□ -1.42
SEC61A2Q9H9S3 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC6.16□□□□□ -1.42
SEC61A2Q9H9S3 PPHLN1-207ENST00000432191 3377 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
SEC61A2Q9H9S3 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC6.16□□□□□ -1.42
SEC61A2Q9H9S3 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC6.16□□□□□ -1.42
SEC61A2Q9H9S3 PMFBP1-202ENST00000355636 3501 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
SEC61A2Q9H9S3 CSNK1A1-204ENST00000504676 1772 ntTSL 2 BASIC6.16□□□□□ -1.42
SEC61A2Q9H9S3 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC6.16□□□□□ -1.42
SEC61A2Q9H9S3 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC6.16□□□□□ -1.42
SEC61A2Q9H9S3 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
SEC61A2Q9H9S3 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
SEC61A2Q9H9S3 RIPOR2-207ENST00000540914 3614 ntTSL 2 BASIC6.16□□□□□ -1.42
SEC61A2Q9H9S3 TLK2-214ENST00000582809 3608 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
SEC61A2Q9H9S3 OR2L13-203ENST00000641893 1817 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
SEC61A2Q9H9S3 CNOT6LP1-201ENST00000559681 1462 ntBASIC6.15□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms