Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC6.18□□□□□ -1.42
TRIM4Q9C037 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC6.18□□□□□ -1.42
TRIM4Q9C037 AC099511.1-201ENST00000564561 590 ntTSL 2 BASIC6.18□□□□□ -1.42
TRIM4Q9C037 AC011120.1-201ENST00000583916 624 ntTSL 5 BASIC6.18□□□□□ -1.42
TRIM4Q9C037 AC025857.2-201ENST00000602711 238 ntBASIC6.18□□□□□ -1.42
TRIM4Q9C037 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
TRIM4Q9C037 Z98949.1-213ENST00000608921 856 ntTSL 5 BASIC6.18□□□□□ -1.42
TRIM4Q9C037 AL589743.6-201ENST00000611025 117 ntBASIC6.18□□□□□ -1.42
TRIM4Q9C037 OR51B2-201ENST00000624187 939 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
TRIM4Q9C037 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC6.18□□□□□ -1.42
TRIM4Q9C037 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
TRIM4Q9C037 OR7E91P-202ENST00000642062 1198 ntBASIC6.18□□□□□ -1.42
TRIM4Q9C037 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
TRIM4Q9C037 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
TRIM4Q9C037 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC6.18□□□□□ -1.42
TRIM4Q9C037 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
TRIM4Q9C037 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
TRIM4Q9C037 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
TRIM4Q9C037 LINC01751-201ENST00000569178 1770 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
TRIM4Q9C037 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC6.18□□□□□ -1.42
TRIM4Q9C037 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC6.18□□□□□ -1.42
TRIM4Q9C037 TCP11X1-202ENST00000622971 1372 ntBASIC6.18□□□□□ -1.42
TRIM4Q9C037 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
TRIM4Q9C037 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
TRIM4Q9C037 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
TRIM4Q9C037 SUN3-201ENST00000297325 1416 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
TRIM4Q9C037 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
TRIM4Q9C037 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
TRIM4Q9C037 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
TRIM4Q9C037 LYARP1-201ENST00000436977 1501 ntBASIC6.17□□□□□ -1.42
TRIM4Q9C037 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
TRIM4Q9C037 MIR323A-201ENST00000362199 86 ntBASIC6.17□□□□□ -1.42
TRIM4Q9C037 AC003045.1-201ENST00000398779 713 ntBASIC6.17□□□□□ -1.42
TRIM4Q9C037 AC092865.3-201ENST00000425390 1026 ntBASIC6.17□□□□□ -1.42
TRIM4Q9C037 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC6.17□□□□□ -1.42
TRIM4Q9C037 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC6.17□□□□□ -1.42
TRIM4Q9C037 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC6.17□□□□□ -1.42
TRIM4Q9C037 AC068228.1-201ENST00000461723 211 ntBASIC6.17□□□□□ -1.42
TRIM4Q9C037 VAMP3-202ENST00000470357 954 ntTSL 3 BASIC6.17□□□□□ -1.42
TRIM4Q9C037 AC022415.1-202ENST00000486612 523 ntBASIC6.17□□□□□ -1.42
TRIM4Q9C037 AC093870.1-201ENST00000506837 213 ntBASIC6.17□□□□□ -1.42
TRIM4Q9C037 TAS2R50-201ENST00000506868 1000 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
TRIM4Q9C037 AC108103.1-201ENST00000511286 446 ntBASIC6.17□□□□□ -1.42
TRIM4Q9C037 RPL7L1P4-201ENST00000513004 707 ntBASIC6.17□□□□□ -1.42
TRIM4Q9C037 MED21-206ENST00000546323 575 ntTSL 3 BASIC6.17□□□□□ -1.42
TRIM4Q9C037 LINC02457-201ENST00000552992 596 ntTSL 4 BASIC6.17□□□□□ -1.42
TRIM4Q9C037 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC6.17□□□□□ -1.42
TRIM4Q9C037 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC6.17□□□□□ -1.42
TRIM4Q9C037 AC015726.1-202ENST00000602532 475 ntTSL 5 BASIC6.17□□□□□ -1.42
TRIM4Q9C037 OR51C1P-201ENST00000608504 942 ntBASIC6.17□□□□□ -1.42
TRIM4Q9C037 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC6.17□□□□□ -1.42
TRIM4Q9C037 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC6.17□□□□□ -1.42
TRIM4Q9C037 AL035425.4-201ENST00000624509 1063 ntBASIC6.17□□□□□ -1.42
TRIM4Q9C037 AL078581.3-201ENST00000627304 744 ntTSL 5 BASIC6.17□□□□□ -1.42
TRIM4Q9C037 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
TRIM4Q9C037 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
TRIM4Q9C037 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC6.17□□□□□ -1.42
TRIM4Q9C037 PSMC1P4-201ENST00000515236 1327 ntBASIC6.17□□□□□ -1.42
TRIM4Q9C037 ADAM24P-201ENST00000398655 2101 ntBASIC6.17□□□□□ -1.42
TRIM4Q9C037 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
TRIM4Q9C037 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
TRIM4Q9C037 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
TRIM4Q9C037 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC6.17□□□□□ -1.42
TRIM4Q9C037 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
TRIM4Q9C037 PTPN2-212ENST00000591497 3390 ntTSL 5 BASIC6.17□□□□□ -1.42
TRIM4Q9C037 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
TRIM4Q9C037 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
TRIM4Q9C037 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
TRIM4Q9C037 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
TRIM4Q9C037 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC6.16□□□□□ -1.42
TRIM4Q9C037 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC6.16□□□□□ -1.42
TRIM4Q9C037 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC6.16□□□□□ -1.42
TRIM4Q9C037 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC6.16□□□□□ -1.42
TRIM4Q9C037 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC6.16□□□□□ -1.42
TRIM4Q9C037 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
TRIM4Q9C037 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
TRIM4Q9C037 AC020633.1-201ENST00000468439 2247 ntBASIC6.16□□□□□ -1.42
TRIM4Q9C037 COX6B1P3-201ENST00000312310 260 ntBASIC6.16□□□□□ -1.42
TRIM4Q9C037 U3.52-201ENST00000384034 216 ntBASIC6.16□□□□□ -1.42
TRIM4Q9C037 RPL5P20-201ENST00000403848 896 ntBASIC6.16□□□□□ -1.42
TRIM4Q9C037 RN7SKP161-201ENST00000411110 305 ntBASIC6.16□□□□□ -1.42
TRIM4Q9C037 AL359092.1-201ENST00000417156 265 ntBASIC6.16□□□□□ -1.42
TRIM4Q9C037 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC6.16□□□□□ -1.42
TRIM4Q9C037 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
TRIM4Q9C037 Z68868.1-201ENST00000429048 544 ntBASIC6.16□□□□□ -1.42
TRIM4Q9C037 AC016766.1-201ENST00000429636 714 ntTSL 3 BASIC6.16□□□□□ -1.42
TRIM4Q9C037 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC6.16□□□□□ -1.42
TRIM4Q9C037 GAPDHP33-201ENST00000443168 1013 ntBASIC6.16□□□□□ -1.42
TRIM4Q9C037 SNRPBP1-201ENST00000443634 282 ntBASIC6.16□□□□□ -1.42
TRIM4Q9C037 RPL5P7-201ENST00000444235 813 ntBASIC6.16□□□□□ -1.42
TRIM4Q9C037 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC6.16□□□□□ -1.42
TRIM4Q9C037 RPL5P14-201ENST00000494197 878 ntBASIC6.16□□□□□ -1.42
TRIM4Q9C037 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC6.16□□□□□ -1.42
TRIM4Q9C037 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC6.16□□□□□ -1.42
TRIM4Q9C037 RNA5SP318-201ENST00000516352 92 ntBASIC6.16□□□□□ -1.42
TRIM4Q9C037 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC6.16□□□□□ -1.42
TRIM4Q9C037 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC6.16□□□□□ -1.42
TRIM4Q9C037 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC6.16□□□□□ -1.42
TRIM4Q9C037 AC073916.1-201ENST00000545095 130 ntBASIC6.16□□□□□ -1.42
TRIM4Q9C037 DCN-209ENST00000546745 1026 ntTSL 3 BASIC6.16□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms