Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 PCBP2P1-201ENST00000437262 977 ntBASIC5.5□□□□□ -1.53
C9orf40Q8IXQ3 TUBB4BP6-201ENST00000437576 479 ntBASIC5.5□□□□□ -1.53
C9orf40Q8IXQ3 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC5.5□□□□□ -1.53
C9orf40Q8IXQ3 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC5.5□□□□□ -1.53
C9orf40Q8IXQ3 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC5.5□□□□□ -1.53
C9orf40Q8IXQ3 SLC25A51P1-201ENST00000468432 871 ntBASIC5.5□□□□□ -1.53
C9orf40Q8IXQ3 AC094085.1-201ENST00000468914 584 ntBASIC5.5□□□□□ -1.53
C9orf40Q8IXQ3 AL122020.1-201ENST00000472287 459 ntBASIC5.5□□□□□ -1.53
C9orf40Q8IXQ3 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC5.5□□□□□ -1.53
C9orf40Q8IXQ3 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC5.5□□□□□ -1.53
C9orf40Q8IXQ3 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC5.5□□□□□ -1.53
C9orf40Q8IXQ3 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC5.5□□□□□ -1.53
C9orf40Q8IXQ3 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC5.5□□□□□ -1.53
C9orf40Q8IXQ3 NANOGNBP2-201ENST00000544753 553 ntBASIC5.5□□□□□ -1.53
C9orf40Q8IXQ3 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC5.5□□□□□ -1.53
C9orf40Q8IXQ3 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
C9orf40Q8IXQ3 AL096712.1-201ENST00000614561 159 ntBASIC5.5□□□□□ -1.53
C9orf40Q8IXQ3 AC129915.3-201ENST00000634128 948 ntBASIC5.5□□□□□ -1.53
C9orf40Q8IXQ3 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC5.5□□□□□ -1.53
C9orf40Q8IXQ3 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC5.5□□□□□ -1.53
C9orf40Q8IXQ3 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
C9orf40Q8IXQ3 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
C9orf40Q8IXQ3 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
C9orf40Q8IXQ3 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC5.5□□□□□ -1.53
C9orf40Q8IXQ3 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
C9orf40Q8IXQ3 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
C9orf40Q8IXQ3 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC5.5□□□□□ -1.53
C9orf40Q8IXQ3 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
C9orf40Q8IXQ3 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC5.5□□□□□ -1.53
C9orf40Q8IXQ3 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
C9orf40Q8IXQ3 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
C9orf40Q8IXQ3 AL731532.1-201ENST00000623972 4236 ntBASIC5.5□□□□□ -1.53
C9orf40Q8IXQ3 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
C9orf40Q8IXQ3 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
C9orf40Q8IXQ3 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
C9orf40Q8IXQ3 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC5.49□□□□□ -1.53
C9orf40Q8IXQ3 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
C9orf40Q8IXQ3 STK3-216ENST00000523601 3107 ntTSL 2 BASIC5.49□□□□□ -1.53
C9orf40Q8IXQ3 PARP4P2-201ENST00000446672 3326 ntBASIC5.49□□□□□ -1.53
C9orf40Q8IXQ3 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
C9orf40Q8IXQ3 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
C9orf40Q8IXQ3 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
C9orf40Q8IXQ3 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
C9orf40Q8IXQ3 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
C9orf40Q8IXQ3 RNU1-150P-201ENST00000362491 162 ntBASIC5.49□□□□□ -1.53
C9orf40Q8IXQ3 RN7SKP128-201ENST00000364270 303 ntBASIC5.49□□□□□ -1.53
C9orf40Q8IXQ3 AL121835.1-201ENST00000404250 354 ntBASIC5.49□□□□□ -1.53
C9orf40Q8IXQ3 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
C9orf40Q8IXQ3 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC5.49□□□□□ -1.53
C9orf40Q8IXQ3 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC5.49□□□□□ -1.53
C9orf40Q8IXQ3 BX323845.3-201ENST00000428215 527 ntBASIC5.49□□□□□ -1.53
C9orf40Q8IXQ3 CDY8P-201ENST00000428380 1279 ntBASIC5.49□□□□□ -1.53
C9orf40Q8IXQ3 BTG3P1-201ENST00000435859 716 ntBASIC5.49□□□□□ -1.53
C9orf40Q8IXQ3 RPS12P17-201ENST00000438591 377 ntBASIC5.49□□□□□ -1.53
C9orf40Q8IXQ3 AL663074.2-201ENST00000440621 479 ntBASIC5.49□□□□□ -1.53
C9orf40Q8IXQ3 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC5.49□□□□□ -1.53
C9orf40Q8IXQ3 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
C9orf40Q8IXQ3 CDY20P-201ENST00000447528 1279 ntBASIC5.49□□□□□ -1.53
C9orf40Q8IXQ3 ACA64.1-201ENST00000459171 127 ntBASIC5.49□□□□□ -1.53
C9orf40Q8IXQ3 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC5.49□□□□□ -1.53
C9orf40Q8IXQ3 AC111000.5-201ENST00000506559 1178 ntBASIC5.49□□□□□ -1.53
C9orf40Q8IXQ3 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
C9orf40Q8IXQ3 RN7SKP288-201ENST00000516227 268 ntBASIC5.49□□□□□ -1.53
C9orf40Q8IXQ3 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
C9orf40Q8IXQ3 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
C9orf40Q8IXQ3 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC5.49□□□□□ -1.53
C9orf40Q8IXQ3 CASP5-209ENST00000531367 879 ntTSL 5 BASIC5.49□□□□□ -1.53
C9orf40Q8IXQ3 LDHC-203ENST00000535809 757 ntTSL 5 BASIC5.49□□□□□ -1.53
C9orf40Q8IXQ3 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC5.49□□□□□ -1.53
C9orf40Q8IXQ3 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
C9orf40Q8IXQ3 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC5.49□□□□□ -1.53
C9orf40Q8IXQ3 AL049779.3-201ENST00000557141 606 ntBASIC5.49□□□□□ -1.53
C9orf40Q8IXQ3 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC5.49□□□□□ -1.53
C9orf40Q8IXQ3 TXNP4-201ENST00000575018 310 ntBASIC5.49□□□□□ -1.53
C9orf40Q8IXQ3 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC5.49□□□□□ -1.53
C9orf40Q8IXQ3 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC5.49□□□□□ -1.53
C9orf40Q8IXQ3 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC5.49□□□□□ -1.53
C9orf40Q8IXQ3 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC5.49□□□□□ -1.53
C9orf40Q8IXQ3 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC5.49□□□□□ -1.53
C9orf40Q8IXQ3 AC010809.3-201ENST00000621310 641 ntBASIC5.49□□□□□ -1.53
C9orf40Q8IXQ3 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
C9orf40Q8IXQ3 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
C9orf40Q8IXQ3 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC5.49□□□□□ -1.53
C9orf40Q8IXQ3 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
C9orf40Q8IXQ3 AL022323.4-201ENST00000623980 13120 ntBASIC5.49□□□□□ -1.53
C9orf40Q8IXQ3 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC5.49□□□□□ -1.53
C9orf40Q8IXQ3 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC5.49□□□□□ -1.53
C9orf40Q8IXQ3 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
C9orf40Q8IXQ3 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC5.48□□□□□ -1.53
C9orf40Q8IXQ3 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
C9orf40Q8IXQ3 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC5.48□□□□□ -1.53
C9orf40Q8IXQ3 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
C9orf40Q8IXQ3 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
C9orf40Q8IXQ3 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
C9orf40Q8IXQ3 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
C9orf40Q8IXQ3 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC5.48□□□□□ -1.53
C9orf40Q8IXQ3 HCFC2P1-201ENST00000392864 1592 ntBASIC5.48□□□□□ -1.53
C9orf40Q8IXQ3 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
C9orf40Q8IXQ3 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
C9orf40Q8IXQ3 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 92.7 ms