Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC5.56□□□□□ -1.52
SHFQ7M4L6 DDX6P1-205ENST00000441966 1436 ntBASIC5.56□□□□□ -1.52
SHFQ7M4L6 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
SHFQ7M4L6 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SHFQ7M4L6 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
SHFQ7M4L6 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SHFQ7M4L6 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC5.55□□□□□ -1.52
SHFQ7M4L6 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
SHFQ7M4L6 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SHFQ7M4L6 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.55□□□□□ -1.52
SHFQ7M4L6 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SHFQ7M4L6 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
SHFQ7M4L6 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC5.55□□□□□ -1.52
SHFQ7M4L6 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SHFQ7M4L6 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
SHFQ7M4L6 XAGE3-201ENST00000346279 497 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SHFQ7M4L6 RNU6-697P-201ENST00000363348 107 ntBASIC5.55□□□□□ -1.52
SHFQ7M4L6 AC012358.1-201ENST00000366153 916 ntTSL 3 BASIC5.55□□□□□ -1.52
SHFQ7M4L6 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
SHFQ7M4L6 ATP5EP2-201ENST00000381026 385 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
SHFQ7M4L6 RNA5SP155-201ENST00000411154 129 ntBASIC5.55□□□□□ -1.52
SHFQ7M4L6 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC5.55□□□□□ -1.52
SHFQ7M4L6 AC009506.2-201ENST00000420635 840 ntBASIC5.55□□□□□ -1.52
SHFQ7M4L6 AC016745.1-201ENST00000422178 508 ntTSL 5 BASIC5.55□□□□□ -1.52
SHFQ7M4L6 AP003385.1-201ENST00000426387 893 ntBASIC5.55□□□□□ -1.52
SHFQ7M4L6 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC5.55□□□□□ -1.52
SHFQ7M4L6 AL590399.2-201ENST00000427536 309 ntBASIC5.55□□□□□ -1.52
SHFQ7M4L6 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC5.55□□□□□ -1.52
SHFQ7M4L6 AC073508.1-201ENST00000428866 656 ntBASIC5.55□□□□□ -1.52
SHFQ7M4L6 AL731534.1-201ENST00000434711 269 ntBASIC5.55□□□□□ -1.52
SHFQ7M4L6 RAB9AP5-201ENST00000437794 597 ntBASIC5.55□□□□□ -1.52
SHFQ7M4L6 RAB9AP2-201ENST00000443911 597 ntBASIC5.55□□□□□ -1.52
SHFQ7M4L6 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC5.55□□□□□ -1.52
SHFQ7M4L6 SLAMF6P1-201ENST00000451067 602 ntBASIC5.55□□□□□ -1.52
SHFQ7M4L6 AC092675.1-203ENST00000454230 538 ntTSL 5 BASIC5.55□□□□□ -1.52
SHFQ7M4L6 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC5.55□□□□□ -1.52
SHFQ7M4L6 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC5.55□□□□□ -1.52
SHFQ7M4L6 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
SHFQ7M4L6 AC135999.1-201ENST00000478962 479 ntBASIC5.55□□□□□ -1.52
SHFQ7M4L6 RN7SL413P-201ENST00000482700 297 ntBASIC5.55□□□□□ -1.52
SHFQ7M4L6 RPL5P33-201ENST00000487833 905 ntBASIC5.55□□□□□ -1.52
SHFQ7M4L6 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC5.55□□□□□ -1.52
SHFQ7M4L6 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC5.55□□□□□ -1.52
SHFQ7M4L6 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC5.55□□□□□ -1.52
SHFQ7M4L6 HMGN1P15-201ENST00000513870 295 ntBASIC5.55□□□□□ -1.52
SHFQ7M4L6 RNU6-1334P-201ENST00000516032 105 ntBASIC5.55□□□□□ -1.52
SHFQ7M4L6 SEC11B-201ENST00000518383 499 ntBASIC5.55□□□□□ -1.52
SHFQ7M4L6 AC008429.4-201ENST00000521201 182 ntBASIC5.55□□□□□ -1.52
SHFQ7M4L6 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC5.55□□□□□ -1.52
SHFQ7M4L6 AL133399.1-201ENST00000527476 298 ntBASIC5.55□□□□□ -1.52
SHFQ7M4L6 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
SHFQ7M4L6 OR6M2P-201ENST00000529831 871 ntBASIC5.55□□□□□ -1.52
SHFQ7M4L6 AC006065.4-204ENST00000537478 654 ntTSL 2 BASIC5.55□□□□□ -1.52
SHFQ7M4L6 AC006065.4-203ENST00000541065 526 ntTSL 2 BASIC5.55□□□□□ -1.52
SHFQ7M4L6 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC5.55□□□□□ -1.52
SHFQ7M4L6 AC023080.1-201ENST00000551663 931 ntBASIC5.55□□□□□ -1.52
SHFQ7M4L6 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC5.55□□□□□ -1.52
SHFQ7M4L6 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC5.55□□□□□ -1.52
SHFQ7M4L6 TTC39C-204ENST00000577185 533 ntTSL 3 BASIC5.55□□□□□ -1.52
SHFQ7M4L6 RN7SL657P-201ENST00000582431 293 ntBASIC5.55□□□□□ -1.52
SHFQ7M4L6 AC005332.4-201ENST00000592752 579 ntBASIC5.55□□□□□ -1.52
SHFQ7M4L6 AL583832.1-201ENST00000603227 784 ntBASIC5.55□□□□□ -1.52
SHFQ7M4L6 AC011458.1-201ENST00000604034 617 ntBASIC5.55□□□□□ -1.52
SHFQ7M4L6 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC5.55□□□□□ -1.52
SHFQ7M4L6 AC247036.1-201ENST00000605005 389 ntTSL 2 BASIC5.55□□□□□ -1.52
SHFQ7M4L6 AL078624.2-201ENST00000605063 554 ntBASIC5.55□□□□□ -1.52
SHFQ7M4L6 PPATP2-201ENST00000605635 508 ntBASIC5.55□□□□□ -1.52
SHFQ7M4L6 AL355802.4-201ENST00000607635 548 ntBASIC5.55□□□□□ -1.52
SHFQ7M4L6 AL589743.6-201ENST00000611025 117 ntBASIC5.55□□□□□ -1.52
SHFQ7M4L6 AL136097.3-201ENST00000611097 505 ntBASIC5.55□□□□□ -1.52
SHFQ7M4L6 AP006248.3-201ENST00000623580 594 ntBASIC5.55□□□□□ -1.52
SHFQ7M4L6 AL136984.1-201ENST00000607611 1893 ntBASIC5.55□□□□□ -1.52
SHFQ7M4L6 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC5.55□□□□□ -1.52
SHFQ7M4L6 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SHFQ7M4L6 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
SHFQ7M4L6 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SHFQ7M4L6 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC5.55□□□□□ -1.52
SHFQ7M4L6 SPANXN2-201ENST00000598475 1378 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SHFQ7M4L6 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
SHFQ7M4L6 AL359091.1-201ENST00000449048 1734 ntBASIC5.54□□□□□ -1.52
SHFQ7M4L6 AL592494.2-201ENST00000425455 1548 ntBASIC5.54□□□□□ -1.52
SHFQ7M4L6 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC5.54□□□□□ -1.52
SHFQ7M4L6 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC5.54□□□□□ -1.52
SHFQ7M4L6 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC5.54□□□□□ -1.52
SHFQ7M4L6 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC5.54□□□□□ -1.52
SHFQ7M4L6 AC004656.1-201ENST00000568479 4951 ntBASIC5.54□□□□□ -1.52
SHFQ7M4L6 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SHFQ7M4L6 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SHFQ7M4L6 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SHFQ7M4L6 HOPX-204ENST00000381260 1141 ntTSL 3 BASIC5.54□□□□□ -1.52
SHFQ7M4L6 MIR138-2-201ENST00000384916 84 ntBASIC5.54□□□□□ -1.52
SHFQ7M4L6 MIR27A-201ENST00000385073 78 ntBASIC5.54□□□□□ -1.52
SHFQ7M4L6 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC5.54□□□□□ -1.52
SHFQ7M4L6 FIGN-202ENST00000409634 746 ntTSL 5 BASIC5.54□□□□□ -1.52
SHFQ7M4L6 NR1I3-208ENST00000412844 989 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SHFQ7M4L6 OR52N3P-201ENST00000413417 934 ntBASIC5.54□□□□□ -1.52
SHFQ7M4L6 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC5.54□□□□□ -1.52
SHFQ7M4L6 NPM1P26-201ENST00000426339 738 ntBASIC5.54□□□□□ -1.52
SHFQ7M4L6 IGLV3-4-201ENST00000432300 244 ntBASIC5.54□□□□□ -1.52
SHFQ7M4L6 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 119.8 ms