Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC6.92□□□□□ -1.3
GABPAQ06546 AC007114.2-201ENST00000576014 4281 ntBASIC6.92□□□□□ -1.3
GABPAQ06546 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC6.92□□□□□ -1.3
GABPAQ06546 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
GABPAQ06546 NDUFA4-201ENST00000339600 2130 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
GABPAQ06546 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
GABPAQ06546 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC6.92□□□□□ -1.3
GABPAQ06546 KCNMB3P1-202ENST00000493696 3389 ntBASIC6.92□□□□□ -1.3
GABPAQ06546 GOLGA6L22-204ENST00000622895 4178 ntAPPRIS P5 TSL 5 BASIC6.92□□□□□ -1.3
GABPAQ06546 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC6.92□□□□□ -1.3
GABPAQ06546 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
GABPAQ06546 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
GABPAQ06546 AC068490.1-202ENST00000637384 3185 ntTSL 5 BASIC6.92□□□□□ -1.3
GABPAQ06546 AL137918.1-201ENST00000624542 1922 ntBASIC6.91□□□□□ -1.3
GABPAQ06546 KIF20A-201ENST00000394894 3201 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
GABPAQ06546 AMPD1-203ENST00000520113 2375 ntAPPRIS P3 TSL 1 (best) BASIC6.91□□□□□ -1.3
GABPAQ06546 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC6.91□□□□□ -1.3
GABPAQ06546 PDE4B-207ENST00000480109 2037 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
GABPAQ06546 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
GABPAQ06546 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
GABPAQ06546 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC6.91□□□□□ -1.3
GABPAQ06546 MIR323A-201ENST00000362199 86 ntBASIC6.91□□□□□ -1.3
GABPAQ06546 AC005522.1-201ENST00000395416 346 ntBASIC6.91□□□□□ -1.3
GABPAQ06546 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
GABPAQ06546 AL596448.1-201ENST00000415024 392 ntBASIC6.91□□□□□ -1.3
GABPAQ06546 LINC01762-201ENST00000423907 454 ntTSL 5 BASIC6.91□□□□□ -1.3
GABPAQ06546 AL662874.1-201ENST00000426065 230 ntBASIC6.91□□□□□ -1.3
GABPAQ06546 GAPDHP48-201ENST00000436626 961 ntBASIC6.91□□□□□ -1.3
GABPAQ06546 AC002504.1-201ENST00000438281 691 ntBASIC6.91□□□□□ -1.3
GABPAQ06546 AL035443.1-202ENST00000442841 586 ntTSL 2 BASIC6.91□□□□□ -1.3
GABPAQ06546 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC6.91□□□□□ -1.3
GABPAQ06546 RPSAP39-201ENST00000467439 883 ntBASIC6.91□□□□□ -1.3
GABPAQ06546 RPSAP37-201ENST00000470913 821 ntBASIC6.91□□□□□ -1.3
GABPAQ06546 AC074087.1-201ENST00000512059 724 ntBASIC6.91□□□□□ -1.3
GABPAQ06546 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC6.91□□□□□ -1.3
GABPAQ06546 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC6.91□□□□□ -1.3
GABPAQ06546 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC6.91□□□□□ -1.3
GABPAQ06546 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC6.91□□□□□ -1.3
GABPAQ06546 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
GABPAQ06546 AC103968.1-201ENST00000557841 573 ntBASIC6.91□□□□□ -1.3
GABPAQ06546 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC6.91□□□□□ -1.3
GABPAQ06546 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC6.91□□□□□ -1.3
GABPAQ06546 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC6.91□□□□□ -1.3
GABPAQ06546 AC004477.3-201ENST00000614061 590 ntBASIC6.91□□□□□ -1.3
GABPAQ06546 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
GABPAQ06546 AL445670.1-201ENST00000618889 801 ntBASIC6.91□□□□□ -1.3
GABPAQ06546 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC6.91□□□□□ -1.3
GABPAQ06546 AC119674.1-217ENST00000641942 1086 ntBASIC6.91□□□□□ -1.3
GABPAQ06546 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
GABPAQ06546 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
GABPAQ06546 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC6.91□□□□□ -1.3
GABPAQ06546 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
GABPAQ06546 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC6.91□□□□□ -1.3
GABPAQ06546 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
GABPAQ06546 AC007842.1-201ENST00000597336 2039 ntBASIC6.91□□□□□ -1.3
GABPAQ06546 ARMCX5-202ENST00000372742 2647 ntAPPRIS P1 TSL 2 BASIC6.91□□□□□ -1.3
GABPAQ06546 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
GABPAQ06546 MTCO1P11-201ENST00000429111 1528 ntBASIC6.91□□□□□ -1.3
GABPAQ06546 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
GABPAQ06546 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC6.9□□□□□ -1.3
GABPAQ06546 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
GABPAQ06546 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC6.9□□□□□ -1.3
GABPAQ06546 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
GABPAQ06546 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC6.9□□□□□ -1.3
GABPAQ06546 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
GABPAQ06546 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
GABPAQ06546 MSR1-202ENST00000350896 3572 ntTSL 5 BASIC6.9□□□□□ -1.3
GABPAQ06546 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.3
GABPAQ06546 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC6.9□□□□□ -1.3
GABPAQ06546 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
GABPAQ06546 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
GABPAQ06546 RNA5SP46-201ENST00000362370 120 ntBASIC6.9□□□□□ -1.3
GABPAQ06546 LINC01687-201ENST00000416327 795 ntTSL 3 BASIC6.9□□□□□ -1.3
GABPAQ06546 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC6.9□□□□□ -1.3
GABPAQ06546 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC6.9□□□□□ -1.3
GABPAQ06546 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC6.9□□□□□ -1.3
GABPAQ06546 AC242426.1-201ENST00000435270 960 ntBASIC6.9□□□□□ -1.3
GABPAQ06546 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
GABPAQ06546 AL603882.1-201ENST00000463059 681 ntBASIC6.9□□□□□ -1.3
GABPAQ06546 AC099521.1-201ENST00000482557 334 ntBASIC6.9□□□□□ -1.3
GABPAQ06546 AC009120.1-201ENST00000493458 473 ntBASIC6.9□□□□□ -1.3
GABPAQ06546 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC6.9□□□□□ -1.3
GABPAQ06546 RN7SL284P-201ENST00000498823 275 ntBASIC6.9□□□□□ -1.3
GABPAQ06546 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC6.9□□□□□ -1.3
GABPAQ06546 MIR3176-201ENST00000582210 90 ntBASIC6.9□□□□□ -1.3
GABPAQ06546 Z98949.1-210ENST00000597548 766 ntTSL 5 BASIC6.9□□□□□ -1.3
GABPAQ06546 AL049840.6-202ENST00000603373 279 ntBASIC6.9□□□□□ -1.3
GABPAQ06546 AL512624.1-201ENST00000613638 469 ntBASIC6.9□□□□□ -1.3
GABPAQ06546 AC022467.1-201ENST00000614738 749 ntBASIC6.9□□□□□ -1.3
GABPAQ06546 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC6.9□□□□□ -1.3
GABPAQ06546 LINC01720-201ENST00000413356 2216 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
GABPAQ06546 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
GABPAQ06546 LUC7L2-201ENST00000263545 2287 ntTSL 5 BASIC6.9□□□□□ -1.31
GABPAQ06546 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
GABPAQ06546 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.31
GABPAQ06546 OLMALINC-203ENST00000641087 3779 ntBASIC6.9□□□□□ -1.31
GABPAQ06546 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
GABPAQ06546 AL022323.4-201ENST00000623980 13120 ntBASIC6.9□□□□□ -1.31
GABPAQ06546 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC6.9□□□□□ -1.31
GABPAQ06546 ARL14EPL-201ENST00000601302 1914 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 91.2 ms