Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.91□□□□□ -1.46
PDX1P52945 AC015689.2-201ENST00000528172 1738 ntBASIC5.91□□□□□ -1.46
PDX1P52945 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
PDX1P52945 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
PDX1P52945 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
PDX1P52945 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
PDX1P52945 TET1P1-201ENST00000426627 2301 ntBASIC5.91□□□□□ -1.46
PDX1P52945 AC024651.2-201ENST00000562480 2098 ntBASIC5.91□□□□□ -1.46
PDX1P52945 MTCO1P8-201ENST00000416914 1523 ntBASIC5.91□□□□□ -1.46
PDX1P52945 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
PDX1P52945 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
PDX1P52945 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
PDX1P52945 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC5.91□□□□□ -1.46
PDX1P52945 MIR323A-201ENST00000362199 86 ntBASIC5.91□□□□□ -1.46
PDX1P52945 SNORD8-201ENST00000363915 110 ntBASIC5.91□□□□□ -1.46
PDX1P52945 U3.25-201ENST00000391209 220 ntBASIC5.91□□□□□ -1.46
PDX1P52945 RNU4-64P-201ENST00000410795 131 ntBASIC5.91□□□□□ -1.46
PDX1P52945 RN7SKP161-201ENST00000411110 305 ntBASIC5.91□□□□□ -1.46
PDX1P52945 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC5.91□□□□□ -1.46
PDX1P52945 RPL35AP31-201ENST00000418340 337 ntBASIC5.91□□□□□ -1.46
PDX1P52945 BX284632.2-201ENST00000421091 399 ntBASIC5.91□□□□□ -1.46
PDX1P52945 BX323845.3-201ENST00000428215 527 ntBASIC5.91□□□□□ -1.46
PDX1P52945 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC5.91□□□□□ -1.46
PDX1P52945 VN1R110P-201ENST00000438988 971 ntBASIC5.91□□□□□ -1.46
PDX1P52945 AL512605.1-202ENST00000441919 381 ntBASIC5.91□□□□□ -1.46
PDX1P52945 AL359955.2-201ENST00000445380 353 ntBASIC5.91□□□□□ -1.46
PDX1P52945 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC5.91□□□□□ -1.46
PDX1P52945 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC5.91□□□□□ -1.46
PDX1P52945 AC023141.9-201ENST00000458734 412 ntBASIC5.91□□□□□ -1.46
PDX1P52945 RPS26P39-201ENST00000469206 341 ntBASIC5.91□□□□□ -1.46
PDX1P52945 RN7SL717P-201ENST00000478343 297 ntBASIC5.91□□□□□ -1.46
PDX1P52945 AP001960.1-201ENST00000506494 658 ntBASIC5.91□□□□□ -1.46
PDX1P52945 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
PDX1P52945 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC5.91□□□□□ -1.46
PDX1P52945 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC5.91□□□□□ -1.46
PDX1P52945 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC5.91□□□□□ -1.46
PDX1P52945 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC5.91□□□□□ -1.46
PDX1P52945 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC5.91□□□□□ -1.46
PDX1P52945 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC5.91□□□□□ -1.46
PDX1P52945 AC009120.3-201ENST00000563335 499 ntBASIC5.91□□□□□ -1.46
PDX1P52945 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC5.91□□□□□ -1.46
PDX1P52945 MRO-208ENST00000588444 866 ntTSL 3 BASIC5.91□□□□□ -1.46
PDX1P52945 AC119501.1-201ENST00000603646 475 ntBASIC5.91□□□□□ -1.46
PDX1P52945 AC008555.7-201ENST00000605008 583 ntBASIC5.91□□□□□ -1.46
PDX1P52945 AL353729.2-201ENST00000605859 1249 ntBASIC5.91□□□□□ -1.46
PDX1P52945 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC5.91□□□□□ -1.46
PDX1P52945 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC5.91□□□□□ -1.46
PDX1P52945 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC5.91□□□□□ -1.46
PDX1P52945 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC5.91□□□□□ -1.46
PDX1P52945 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
PDX1P52945 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
PDX1P52945 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
PDX1P52945 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC5.91□□□□□ -1.46
PDX1P52945 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
PDX1P52945 THOC2-220ENST00000618150 3211 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
PDX1P52945 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
PDX1P52945 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC5.9□□□□□ -1.46
PDX1P52945 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.9□□□□□ -1.46
PDX1P52945 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
PDX1P52945 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
PDX1P52945 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC5.9□□□□□ -1.46
PDX1P52945 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.46
PDX1P52945 GUCY1B2-204ENST00000531898 1979 ntBASIC5.9□□□□□ -1.46
PDX1P52945 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC5.9□□□□□ -1.46
PDX1P52945 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC5.9□□□□□ -1.46
PDX1P52945 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
PDX1P52945 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC5.9□□□□□ -1.46
PDX1P52945 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC5.9□□□□□ -1.46
PDX1P52945 AC244453.4-201ENST00000419150 388 ntBASIC5.9□□□□□ -1.46
PDX1P52945 AC117434.1-201ENST00000419971 836 ntBASIC5.9□□□□□ -1.46
PDX1P52945 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC5.9□□□□□ -1.46
PDX1P52945 LYPLA1P1-201ENST00000434514 622 ntBASIC5.9□□□□□ -1.46
PDX1P52945 AP000281.1-201ENST00000444036 316 ntBASIC5.9□□□□□ -1.46
PDX1P52945 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
PDX1P52945 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC5.9□□□□□ -1.46
PDX1P52945 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
PDX1P52945 AP006222.1-205ENST00000450734 457 ntBASIC5.9□□□□□ -1.46
PDX1P52945 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC5.9□□□□□ -1.46
PDX1P52945 RANP2-201ENST00000456833 229 ntBASIC5.9□□□□□ -1.46
PDX1P52945 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.46
PDX1P52945 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC5.9□□□□□ -1.46
PDX1P52945 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC5.9□□□□□ -1.46
PDX1P52945 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
PDX1P52945 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC5.9□□□□□ -1.46
PDX1P52945 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC5.9□□□□□ -1.46
PDX1P52945 OLR1-210ENST00000544577 924 ntTSL 5 BASIC5.9□□□□□ -1.46
PDX1P52945 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC5.9□□□□□ -1.46
PDX1P52945 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC5.9□□□□□ -1.46
PDX1P52945 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC5.9□□□□□ -1.46
PDX1P52945 AC022467.1-201ENST00000614738 749 ntBASIC5.9□□□□□ -1.46
PDX1P52945 AC018659.2-201ENST00000624690 715 ntBASIC5.9□□□□□ -1.46
PDX1P52945 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC5.9□□□□□ -1.46
PDX1P52945 AC022726.2-201ENST00000634673 547 ntBASIC5.9□□□□□ -1.46
PDX1P52945 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
PDX1P52945 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
PDX1P52945 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
PDX1P52945 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
PDX1P52945 AC027279.1-201ENST00000568885 4284 ntBASIC5.9□□□□□ -1.47
PDX1P52945 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
PDX1P52945 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms