Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC5.25□□□□□ -1.57
CX3CR1P49238 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
CX3CR1P49238 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CX3CR1P49238 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CX3CR1P49238 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.24□□□□□ -1.57
CX3CR1P49238 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.24□□□□□ -1.57
CX3CR1P49238 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CX3CR1P49238 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CX3CR1P49238 AL161756.3-201ENST00000641216 2071 ntBASIC5.24□□□□□ -1.57
CX3CR1P49238 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
CX3CR1P49238 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC5.24□□□□□ -1.57
CX3CR1P49238 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CX3CR1P49238 TMEM31-201ENST00000319560 728 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CX3CR1P49238 MIR133A2-201ENST00000347538 102 ntBASIC5.24□□□□□ -1.57
CX3CR1P49238 SNORA21-201ENST00000362423 132 ntBASIC5.24□□□□□ -1.57
CX3CR1P49238 RNA5SP453-201ENST00000362503 119 ntBASIC5.24□□□□□ -1.57
CX3CR1P49238 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CX3CR1P49238 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
CX3CR1P49238 RN7SKP146-201ENST00000410242 334 ntBASIC5.24□□□□□ -1.57
CX3CR1P49238 Z82198.3-201ENST00000421145 199 ntBASIC5.24□□□□□ -1.57
CX3CR1P49238 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC5.24□□□□□ -1.57
CX3CR1P49238 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC5.24□□□□□ -1.57
CX3CR1P49238 AC130360.1-201ENST00000425489 1117 ntBASIC5.24□□□□□ -1.57
CX3CR1P49238 RPSAP32-201ENST00000432681 526 ntBASIC5.24□□□□□ -1.57
CX3CR1P49238 AC073410.1-201ENST00000435125 589 ntBASIC5.24□□□□□ -1.57
CX3CR1P49238 TRGC2-201ENST00000436911 1013 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
CX3CR1P49238 SEPT14P12-201ENST00000442280 560 ntBASIC5.24□□□□□ -1.57
CX3CR1P49238 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC5.24□□□□□ -1.57
CX3CR1P49238 AC104164.1-201ENST00000460282 590 ntBASIC5.24□□□□□ -1.57
CX3CR1P49238 RN7SL836P-201ENST00000476140 296 ntBASIC5.24□□□□□ -1.57
CX3CR1P49238 RPL29P23-201ENST00000486188 442 ntBASIC5.24□□□□□ -1.57
CX3CR1P49238 AC111000.5-201ENST00000506559 1178 ntBASIC5.24□□□□□ -1.57
CX3CR1P49238 GUSBP9-201ENST00000510138 584 ntBASIC5.24□□□□□ -1.57
CX3CR1P49238 AC108103.1-201ENST00000511286 446 ntBASIC5.24□□□□□ -1.57
CX3CR1P49238 TOMM22P4-201ENST00000511318 336 ntBASIC5.24□□□□□ -1.57
CX3CR1P49238 HMGN1P17-201ENST00000513734 295 ntBASIC5.24□□□□□ -1.57
CX3CR1P49238 CR383658.1-201ENST00000514609 734 ntBASIC5.24□□□□□ -1.57
CX3CR1P49238 AC130365.2-201ENST00000525882 1201 ntBASIC5.24□□□□□ -1.57
CX3CR1P49238 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.24□□□□□ -1.57
CX3CR1P49238 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
CX3CR1P49238 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC5.24□□□□□ -1.57
CX3CR1P49238 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC5.24□□□□□ -1.57
CX3CR1P49238 AC016252.1-201ENST00000609721 474 ntBASIC5.24□□□□□ -1.57
CX3CR1P49238 AL135999.3-201ENST00000610501 812 ntBASIC5.24□□□□□ -1.57
CX3CR1P49238 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CX3CR1P49238 AL080312.2-201ENST00000613001 630 ntBASIC5.24□□□□□ -1.57
CX3CR1P49238 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC5.24□□□□□ -1.57
CX3CR1P49238 AC096861.1-201ENST00000616652 240 ntBASIC5.24□□□□□ -1.57
CX3CR1P49238 AL109924.4-201ENST00000623089 670 ntBASIC5.24□□□□□ -1.57
CX3CR1P49238 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC5.24□□□□□ -1.57
CX3CR1P49238 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CX3CR1P49238 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CX3CR1P49238 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
CX3CR1P49238 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
CX3CR1P49238 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
CX3CR1P49238 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CX3CR1P49238 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CX3CR1P49238 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CX3CR1P49238 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
CX3CR1P49238 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC5.24□□□□□ -1.57
CX3CR1P49238 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.24□□□□□ -1.57
CX3CR1P49238 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
CX3CR1P49238 AC092451.3-201ENST00000625067 1343 ntBASIC5.23□□□□□ -1.57
CX3CR1P49238 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
CX3CR1P49238 MTCO1P28-201ENST00000574177 1528 ntBASIC5.23□□□□□ -1.57
CX3CR1P49238 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
CX3CR1P49238 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CX3CR1P49238 AC005224.3-201ENST00000584683 2140 ntBASIC5.23□□□□□ -1.57
CX3CR1P49238 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC5.23□□□□□ -1.57
CX3CR1P49238 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC5.23□□□□□ -1.57
CX3CR1P49238 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
CX3CR1P49238 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.23□□□□□ -1.57
CX3CR1P49238 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CX3CR1P49238 AC093671.1-201ENST00000624981 2929 ntBASIC5.23□□□□□ -1.57
CX3CR1P49238 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CX3CR1P49238 RN7SKP184-201ENST00000362348 333 ntBASIC5.23□□□□□ -1.57
CX3CR1P49238 RNU1-134P-201ENST00000362935 165 ntBASIC5.23□□□□□ -1.57
CX3CR1P49238 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
CX3CR1P49238 MIR191-201ENST00000384873 92 ntBASIC5.23□□□□□ -1.57
CX3CR1P49238 GNAT3-201ENST00000398291 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CX3CR1P49238 SNRPEP6-201ENST00000407465 277 ntBASIC5.23□□□□□ -1.57
CX3CR1P49238 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC5.23□□□□□ -1.57
CX3CR1P49238 RN7SKP108-201ENST00000411367 328 ntBASIC5.23□□□□□ -1.57
CX3CR1P49238 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC5.23□□□□□ -1.57
CX3CR1P49238 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC5.23□□□□□ -1.57
CX3CR1P49238 AC092865.3-201ENST00000425390 1026 ntBASIC5.23□□□□□ -1.57
CX3CR1P49238 USP24P1-201ENST00000433802 779 ntBASIC5.23□□□□□ -1.57
CX3CR1P49238 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC5.23□□□□□ -1.57
CX3CR1P49238 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC5.23□□□□□ -1.57
CX3CR1P49238 FTLP8-201ENST00000446770 267 ntBASIC5.23□□□□□ -1.57
CX3CR1P49238 SDC4P-201ENST00000453285 601 ntBASIC5.23□□□□□ -1.57
CX3CR1P49238 AC078785.2-201ENST00000462010 1253 ntTSL 3 BASIC5.23□□□□□ -1.57
CX3CR1P49238 AC113367.2-201ENST00000505749 160 ntBASIC5.23□□□□□ -1.57
CX3CR1P49238 ST13P12-201ENST00000508958 1094 ntBASIC5.23□□□□□ -1.57
CX3CR1P49238 RNA5SP441-201ENST00000516809 88 ntBASIC5.23□□□□□ -1.57
CX3CR1P49238 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC5.23□□□□□ -1.57
CX3CR1P49238 AP001000.1-201ENST00000526843 742 ntBASIC5.23□□□□□ -1.57
CX3CR1P49238 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC5.23□□□□□ -1.57
CX3CR1P49238 RAB30-209ENST00000532548 644 ntTSL 3 BASIC5.23□□□□□ -1.57
CX3CR1P49238 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms