Protein–RNA interactions for Protein: P47902

CDX1, Homeobox protein CDX-1, humanhuman

Predicted RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1P47902 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
CDX1P47902 MIR421-201ENST00000365696 85 ntBASIC5.16□□□□□ -1.58
CDX1P47902 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CDX1P47902 MRPS6P2-201ENST00000381143 370 ntBASIC5.16□□□□□ -1.58
CDX1P47902 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
CDX1P47902 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC5.16□□□□□ -1.58
CDX1P47902 BX284668.3-201ENST00000414128 882 ntTSL 5 BASIC5.16□□□□□ -1.58
CDX1P47902 AC004012.1-201ENST00000416593 534 ntTSL 4 BASIC5.16□□□□□ -1.58
CDX1P47902 GPN3P1-201ENST00000423883 535 ntBASIC5.16□□□□□ -1.58
CDX1P47902 AC092106.2-201ENST00000436597 487 ntBASIC5.16□□□□□ -1.58
CDX1P47902 AC245291.3-201ENST00000443400 292 ntBASIC5.16□□□□□ -1.58
CDX1P47902 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC5.16□□□□□ -1.58
CDX1P47902 AL157884.3-201ENST00000448273 1184 ntBASIC5.16□□□□□ -1.58
CDX1P47902 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC5.16□□□□□ -1.58
CDX1P47902 RBMY2TP-201ENST00000451162 947 ntBASIC5.16□□□□□ -1.58
CDX1P47902 AL035443.1-201ENST00000456631 304 ntTSL 3 BASIC5.16□□□□□ -1.58
CDX1P47902 AL354953.1-201ENST00000457852 479 ntTSL 5 BASIC5.16□□□□□ -1.58
CDX1P47902 AC104233.1-201ENST00000458107 339 ntTSL 5 BASIC5.16□□□□□ -1.58
CDX1P47902 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC5.16□□□□□ -1.58
CDX1P47902 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC5.16□□□□□ -1.58
CDX1P47902 RN7SL413P-201ENST00000482700 297 ntBASIC5.16□□□□□ -1.58
CDX1P47902 AC092824.1-201ENST00000483524 576 ntBASIC5.16□□□□□ -1.58
CDX1P47902 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC5.16□□□□□ -1.58
CDX1P47902 RPL24-206ENST00000495401 478 ntTSL 2 BASIC5.16□□□□□ -1.58
CDX1P47902 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CDX1P47902 UGT2A3P7-201ENST00000510485 734 ntBASIC5.16□□□□□ -1.58
CDX1P47902 HMGB1P47-201ENST00000511281 589 ntBASIC5.16□□□□□ -1.58
CDX1P47902 AC097501.1-202ENST00000514707 313 ntTSL 3 BASIC5.16□□□□□ -1.58
CDX1P47902 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC5.16□□□□□ -1.58
CDX1P47902 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
CDX1P47902 AL133163.3-201ENST00000556448 504 ntTSL 5 BASIC5.16□□□□□ -1.58
CDX1P47902 AC009269.5-201ENST00000557800 755 ntTSL 3 BASIC5.16□□□□□ -1.58
CDX1P47902 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC5.16□□□□□ -1.58
CDX1P47902 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC5.16□□□□□ -1.58
CDX1P47902 AC023813.1-201ENST00000565055 306 ntTSL 5 BASIC5.16□□□□□ -1.58
CDX1P47902 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC5.16□□□□□ -1.58
CDX1P47902 AC016839.1-201ENST00000578162 867 ntBASIC5.16□□□□□ -1.58
CDX1P47902 AC138207.8-204ENST00000579588 527 ntBASIC5.16□□□□□ -1.58
CDX1P47902 AC023421.2-202ENST00000586213 547 ntTSL 3 BASIC5.16□□□□□ -1.58
CDX1P47902 AC092067.1-201ENST00000592929 488 ntTSL 3 BASIC5.16□□□□□ -1.58
CDX1P47902 AC245052.7-201ENST00000601161 359 ntBASIC5.16□□□□□ -1.58
CDX1P47902 AC104307.1-201ENST00000616142 196 ntBASIC5.16□□□□□ -1.58
CDX1P47902 AL162233.1-201ENST00000620014 944 ntBASIC5.16□□□□□ -1.58
CDX1P47902 AP000577.1-201ENST00000624366 878 ntBASIC5.16□□□□□ -1.58
CDX1P47902 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC5.16□□□□□ -1.58
CDX1P47902 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
CDX1P47902 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC5.16□□□□□ -1.58
CDX1P47902 NDC80-201ENST00000261597 2172 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CDX1P47902 EEF1A1P30-201ENST00000429708 1315 ntBASIC5.16□□□□□ -1.58
CDX1P47902 PSMC1P6-201ENST00000477233 1319 ntBASIC5.16□□□□□ -1.58
CDX1P47902 KYNUP3-201ENST00000574386 1341 ntBASIC5.16□□□□□ -1.58
CDX1P47902 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CDX1P47902 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CDX1P47902 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CDX1P47902 LRRC37A15P-201ENST00000514785 1355 ntBASIC5.16□□□□□ -1.58
CDX1P47902 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC5.16□□□□□ -1.58
CDX1P47902 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
CDX1P47902 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.16□□□□□ -1.58
CDX1P47902 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
CDX1P47902 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.58
CDX1P47902 AC006484.1-201ENST00000435086 1884 ntBASIC5.15□□□□□ -1.58
CDX1P47902 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
CDX1P47902 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
CDX1P47902 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
CDX1P47902 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.58
CDX1P47902 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.58
CDX1P47902 GJA10-203ENST00000638915 1479 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.58
CDX1P47902 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
CDX1P47902 AL731532.1-201ENST00000623972 4236 ntBASIC5.15□□□□□ -1.58
CDX1P47902 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.15□□□□□ -1.58
CDX1P47902 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.15□□□□□ -1.58
CDX1P47902 TCF12-213ENST00000559703 1544 ntTSL 5 BASIC5.15□□□□□ -1.58
CDX1P47902 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
CDX1P47902 NOP10-201ENST00000328848 554 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
CDX1P47902 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
CDX1P47902 RNA5SP85-201ENST00000365378 119 ntBASIC5.15□□□□□ -1.59
CDX1P47902 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
CDX1P47902 RNU6-883P-201ENST00000384597 107 ntBASIC5.15□□□□□ -1.59
CDX1P47902 GNAT3-201ENST00000398291 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
CDX1P47902 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
CDX1P47902 AL121835.1-201ENST00000404250 354 ntBASIC5.15□□□□□ -1.59
CDX1P47902 AL049697.3-201ENST00000406493 982 ntBASIC5.15□□□□□ -1.59
CDX1P47902 RNU2-22P-201ENST00000411266 212 ntBASIC5.15□□□□□ -1.59
CDX1P47902 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC5.15□□□□□ -1.59
CDX1P47902 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC5.15□□□□□ -1.59
CDX1P47902 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
CDX1P47902 OR6R1P-201ENST00000431838 940 ntBASIC5.15□□□□□ -1.59
CDX1P47902 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC5.15□□□□□ -1.59
CDX1P47902 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC5.15□□□□□ -1.59
CDX1P47902 GAPDHP33-201ENST00000443168 1013 ntBASIC5.15□□□□□ -1.59
CDX1P47902 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.59
CDX1P47902 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC5.15□□□□□ -1.59
CDX1P47902 AL512785.1-201ENST00000447899 517 ntTSL 3 BASIC5.15□□□□□ -1.59
CDX1P47902 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
CDX1P47902 LINC01789-202ENST00000455614 491 ntTSL 3 BASIC5.15□□□□□ -1.59
CDX1P47902 YRDCP3-201ENST00000456507 480 ntBASIC5.15□□□□□ -1.59
CDX1P47902 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC5.15□□□□□ -1.59
CDX1P47902 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC5.15□□□□□ -1.59
CDX1P47902 AC078788.1-201ENST00000498457 634 ntTSL 3 BASIC5.15□□□□□ -1.59
CDX1P47902 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 194.1 ms