Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC5.58□□□□□ -1.52
RFC3P40938 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC5.58□□□□□ -1.52
RFC3P40938 AL359839.1-201ENST00000451975 1160 ntBASIC5.58□□□□□ -1.52
RFC3P40938 SETP20-201ENST00000457046 852 ntBASIC5.58□□□□□ -1.52
RFC3P40938 AC108751.3-201ENST00000461814 1020 ntBASIC5.58□□□□□ -1.52
RFC3P40938 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
RFC3P40938 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC5.58□□□□□ -1.52
RFC3P40938 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC5.58□□□□□ -1.52
RFC3P40938 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC5.58□□□□□ -1.52
RFC3P40938 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC5.58□□□□□ -1.52
RFC3P40938 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC5.58□□□□□ -1.52
RFC3P40938 IGLVIV-64-201ENST00000518581 301 ntBASIC5.58□□□□□ -1.52
RFC3P40938 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC5.58□□□□□ -1.52
RFC3P40938 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC5.58□□□□□ -1.52
RFC3P40938 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC5.58□□□□□ -1.52
RFC3P40938 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC5.58□□□□□ -1.52
RFC3P40938 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC5.58□□□□□ -1.52
RFC3P40938 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC5.58□□□□□ -1.52
RFC3P40938 AC100767.2-201ENST00000604840 693 ntBASIC5.58□□□□□ -1.52
RFC3P40938 MIR6862-1-201ENST00000613016 70 ntBASIC5.58□□□□□ -1.52
RFC3P40938 U1.25-201ENST00000614085 162 ntBASIC5.58□□□□□ -1.52
RFC3P40938 MIR6862-2-201ENST00000614755 70 ntBASIC5.58□□□□□ -1.52
RFC3P40938 U1.34-201ENST00000618578 162 ntBASIC5.58□□□□□ -1.52
RFC3P40938 AC245014.3-201ENST00000618589 347 ntBASIC5.58□□□□□ -1.52
RFC3P40938 U1.31-201ENST00000620022 160 ntBASIC5.58□□□□□ -1.52
RFC3P40938 AL512356.3-201ENST00000623005 461 ntBASIC5.58□□□□□ -1.52
RFC3P40938 AC129778.1-202ENST00000623812 261 ntBASIC5.58□□□□□ -1.52
RFC3P40938 AL591379.1-207ENST00000635982 261 ntBASIC5.58□□□□□ -1.52
RFC3P40938 AMYH02020865.1-205ENST00000636189 261 ntBASIC5.58□□□□□ -1.52
RFC3P40938 AP000550.3-201ENST00000637734 379 ntBASIC5.58□□□□□ -1.52
RFC3P40938 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
RFC3P40938 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
RFC3P40938 AL162456.1-201ENST00000634535 2006 ntBASIC5.58□□□□□ -1.52
RFC3P40938 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
RFC3P40938 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC5.58□□□□□ -1.52
RFC3P40938 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC5.58□□□□□ -1.52
RFC3P40938 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
RFC3P40938 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
RFC3P40938 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
RFC3P40938 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.58□□□□□ -1.52
RFC3P40938 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
RFC3P40938 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.57□□□□□ -1.52
RFC3P40938 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC5.57□□□□□ -1.52
RFC3P40938 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC5.57□□□□□ -1.52
RFC3P40938 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
RFC3P40938 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
RFC3P40938 CREM-203ENST00000344351 1625 ntTSL 2 BASIC5.57□□□□□ -1.52
RFC3P40938 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC5.57□□□□□ -1.52
RFC3P40938 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
RFC3P40938 AC092642.1-201ENST00000392417 425 ntBASIC5.57□□□□□ -1.52
RFC3P40938 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC5.57□□□□□ -1.52
RFC3P40938 AC245096.1-201ENST00000413104 546 ntBASIC5.57□□□□□ -1.52
RFC3P40938 AL096829.1-201ENST00000413677 457 ntBASIC5.57□□□□□ -1.52
RFC3P40938 SLC20A1P1-201ENST00000413906 956 ntBASIC5.57□□□□□ -1.52
RFC3P40938 RPS26P38-201ENST00000414476 348 ntBASIC5.57□□□□□ -1.52
RFC3P40938 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC5.57□□□□□ -1.52
RFC3P40938 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC5.57□□□□□ -1.52
RFC3P40938 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC5.57□□□□□ -1.52
RFC3P40938 AC117434.1-201ENST00000419971 836 ntBASIC5.57□□□□□ -1.52
RFC3P40938 SETP9-201ENST00000423837 832 ntBASIC5.57□□□□□ -1.52
RFC3P40938 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC5.57□□□□□ -1.52
RFC3P40938 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC5.57□□□□□ -1.52
RFC3P40938 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC5.57□□□□□ -1.52
RFC3P40938 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC5.57□□□□□ -1.52
RFC3P40938 AC018638.3-201ENST00000461273 132 ntBASIC5.57□□□□□ -1.52
RFC3P40938 RN7SL221P-201ENST00000466190 281 ntBASIC5.57□□□□□ -1.52
RFC3P40938 AC090058.1-201ENST00000498788 435 ntBASIC5.57□□□□□ -1.52
RFC3P40938 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC5.57□□□□□ -1.52
RFC3P40938 AC026782.2-201ENST00000510845 636 ntBASIC5.57□□□□□ -1.52
RFC3P40938 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC5.57□□□□□ -1.52
RFC3P40938 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC5.57□□□□□ -1.52
RFC3P40938 IGHV1-14-201ENST00000523391 241 ntBASIC5.57□□□□□ -1.52
RFC3P40938 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC5.57□□□□□ -1.52
RFC3P40938 RPA2P1-201ENST00000556557 721 ntBASIC5.57□□□□□ -1.52
RFC3P40938 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC5.57□□□□□ -1.52
RFC3P40938 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC5.57□□□□□ -1.52
RFC3P40938 AP005119.1-201ENST00000580956 292 ntBASIC5.57□□□□□ -1.52
RFC3P40938 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC5.57□□□□□ -1.52
RFC3P40938 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC5.57□□□□□ -1.52
RFC3P40938 AL645933.2-201ENST00000606743 1207 ntBASIC5.57□□□□□ -1.52
RFC3P40938 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC5.57□□□□□ -1.52
RFC3P40938 AC018690.1-201ENST00000608144 626 ntBASIC5.57□□□□□ -1.52
RFC3P40938 AC108673.3-201ENST00000609183 335 ntBASIC5.57□□□□□ -1.52
RFC3P40938 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC5.57□□□□□ -1.52
RFC3P40938 AL137246.2-201ENST00000613439 662 ntBASIC5.57□□□□□ -1.52
RFC3P40938 AL137067.2-201ENST00000621202 131 ntBASIC5.57□□□□□ -1.52
RFC3P40938 AL136228.1-201ENST00000622221 319 ntBASIC5.57□□□□□ -1.52
RFC3P40938 UOX-205ENST00000640983 544 ntTSL 4 BASIC5.57□□□□□ -1.52
RFC3P40938 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC5.57□□□□□ -1.52
RFC3P40938 UGT2B24P-201ENST00000514441 1597 ntBASIC5.57□□□□□ -1.52
RFC3P40938 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
RFC3P40938 AC099654.3-201ENST00000447087 1546 ntBASIC5.57□□□□□ -1.52
RFC3P40938 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
RFC3P40938 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
RFC3P40938 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
RFC3P40938 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC5.57□□□□□ -1.52
RFC3P40938 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC5.57□□□□□ -1.52
RFC3P40938 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
RFC3P40938 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
RFC3P40938 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms