Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 PSMA6-214ENST00000556506 763 ntTSL 5 BASIC5.83□□□□□ -1.48
TNFSF4P23510 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
TNFSF4P23510 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC5.83□□□□□ -1.48
TNFSF4P23510 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC5.83□□□□□ -1.48
TNFSF4P23510 AC018845.1-201ENST00000564193 744 ntTSL 2 BASIC5.83□□□□□ -1.48
TNFSF4P23510 LINC01917-201ENST00000565170 1037 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
TNFSF4P23510 LYRM1-208ENST00000567954 460 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
TNFSF4P23510 MIR378H-201ENST00000579966 83 ntBASIC5.83□□□□□ -1.48
TNFSF4P23510 RPAP2P1-201ENST00000603626 1168 ntBASIC5.83□□□□□ -1.48
TNFSF4P23510 AC069431.2-201ENST00000604149 1099 ntBASIC5.83□□□□□ -1.48
TNFSF4P23510 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC5.83□□□□□ -1.48
TNFSF4P23510 MIR6070-201ENST00000613967 103 ntBASIC5.83□□□□□ -1.48
TNFSF4P23510 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC5.83□□□□□ -1.48
TNFSF4P23510 AL669942.2-201ENST00000620352 697 ntBASIC5.83□□□□□ -1.48
TNFSF4P23510 AP003497.2-201ENST00000624220 967 ntBASIC5.83□□□□□ -1.48
TNFSF4P23510 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC5.83□□□□□ -1.48
TNFSF4P23510 AC135068.11-201ENST00000636378 921 ntBASIC5.83□□□□□ -1.48
TNFSF4P23510 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC5.83□□□□□ -1.48
TNFSF4P23510 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
TNFSF4P23510 CLEC3A-201ENST00000299642 1971 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
TNFSF4P23510 ELMO1-202ENST00000396040 1982 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
TNFSF4P23510 ECHDC1-210ENST00000454859 2341 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
TNFSF4P23510 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC5.83□□□□□ -1.48
TNFSF4P23510 ZNF14-201ENST00000344099 2949 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
TNFSF4P23510 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
TNFSF4P23510 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC5.83□□□□□ -1.48
TNFSF4P23510 LRRC31-202ENST00000316428 2520 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
TNFSF4P23510 IARS-206ENST00000447699 4186 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
TNFSF4P23510 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
TNFSF4P23510 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
TNFSF4P23510 LRRC37B-220ENST00000584368 2773 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
TNFSF4P23510 SP110-201ENST00000258381 2426 ntAPPRIS P4 TSL 2 BASIC5.83□□□□□ -1.48
TNFSF4P23510 DMTF1-213ENST00000432937 2411 ntTSL 2 BASIC5.83□□□□□ -1.48
TNFSF4P23510 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
TNFSF4P23510 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC5.82□□□□□ -1.48
TNFSF4P23510 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC5.82□□□□□ -1.48
TNFSF4P23510 AC011416.1-201ENST00000514947 1732 ntBASIC5.82□□□□□ -1.48
TNFSF4P23510 AC093311.1-201ENST00000506586 2021 ntBASIC5.82□□□□□ -1.48
TNFSF4P23510 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC5.82□□□□□ -1.48
TNFSF4P23510 TRIM53CP-201ENST00000531490 1354 ntBASIC5.82□□□□□ -1.48
TNFSF4P23510 CDH19-203ENST00000540086 1963 ntTSL 2 BASIC5.82□□□□□ -1.48
TNFSF4P23510 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
TNFSF4P23510 HMGCS2-204ENST00000544913 1925 ntTSL 2 BASIC5.82□□□□□ -1.48
TNFSF4P23510 GPCPD1-201ENST00000379019 5489 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
TNFSF4P23510 ZNF121-202ENST00000586602 7177 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
TNFSF4P23510 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC5.82□□□□□ -1.48
TNFSF4P23510 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
TNFSF4P23510 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
TNFSF4P23510 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
TNFSF4P23510 SPP2-201ENST00000168148 1024 ntAPPRIS P2 TSL 1 (best) BASIC5.82□□□□□ -1.48
TNFSF4P23510 HIST1H2BA-201ENST00000274764 516 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
TNFSF4P23510 OR7A2P-201ENST00000304105 930 ntBASIC5.82□□□□□ -1.48
TNFSF4P23510 OR52H1-201ENST00000322653 1057 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
TNFSF4P23510 OR6P1-201ENST00000334632 954 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
TNFSF4P23510 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
TNFSF4P23510 RNA5SP27-201ENST00000363839 119 ntBASIC5.82□□□□□ -1.48
TNFSF4P23510 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC5.82□□□□□ -1.48
TNFSF4P23510 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
TNFSF4P23510 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
TNFSF4P23510 RPL23AP59-201ENST00000399415 461 ntBASIC5.82□□□□□ -1.48
TNFSF4P23510 MIR541-201ENST00000401360 84 ntBASIC5.82□□□□□ -1.48
TNFSF4P23510 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC5.82□□□□□ -1.48
TNFSF4P23510 TCEA1P4-201ENST00000415066 844 ntBASIC5.82□□□□□ -1.48
TNFSF4P23510 AL451164.1-201ENST00000417149 390 ntTSL 3 BASIC5.82□□□□□ -1.48
TNFSF4P23510 OR51A6P-201ENST00000418680 1004 ntBASIC5.82□□□□□ -1.48
TNFSF4P23510 AC000089.1-201ENST00000424559 801 ntBASIC5.82□□□□□ -1.48
TNFSF4P23510 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC5.82□□□□□ -1.48
TNFSF4P23510 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
TNFSF4P23510 AC008280.2-201ENST00000455473 307 ntBASIC5.82□□□□□ -1.48
TNFSF4P23510 AC023245.1-201ENST00000468501 517 ntBASIC5.82□□□□□ -1.48
TNFSF4P23510 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC5.82□□□□□ -1.48
TNFSF4P23510 AC108729.1-201ENST00000487812 947 ntBASIC5.82□□□□□ -1.48
TNFSF4P23510 RN7SL187P-201ENST00000495587 303 ntBASIC5.82□□□□□ -1.48
TNFSF4P23510 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC5.82□□□□□ -1.48
TNFSF4P23510 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC5.82□□□□□ -1.48
TNFSF4P23510 AC026414.1-201ENST00000504046 698 ntBASIC5.82□□□□□ -1.48
TNFSF4P23510 AC021088.1-201ENST00000506519 805 ntTSL 3 BASIC5.82□□□□□ -1.48
TNFSF4P23510 GAPDHP71-201ENST00000511530 1003 ntBASIC5.82□□□□□ -1.48
TNFSF4P23510 AC011352.2-201ENST00000514574 1016 ntBASIC5.82□□□□□ -1.48
TNFSF4P23510 RNU2-45P-201ENST00000516068 187 ntBASIC5.82□□□□□ -1.48
TNFSF4P23510 AC008691.1-202ENST00000521472 811 ntTSL 3 BASIC5.82□□□□□ -1.48
TNFSF4P23510 AC021451.1-201ENST00000523498 1129 ntBASIC5.82□□□□□ -1.48
TNFSF4P23510 AP000859.1-201ENST00000525536 307 ntBASIC5.82□□□□□ -1.48
TNFSF4P23510 AP006587.5-201ENST00000532033 739 ntBASIC5.82□□□□□ -1.48
TNFSF4P23510 AC125612.1-201ENST00000547580 377 ntBASIC5.82□□□□□ -1.48
TNFSF4P23510 ELK3-206ENST00000552142 1242 ntTSL 5 BASIC5.82□□□□□ -1.48
TNFSF4P23510 PPIAP6-201ENST00000557078 499 ntBASIC5.82□□□□□ -1.48
TNFSF4P23510 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC5.82□□□□□ -1.48
TNFSF4P23510 CCL2-202ENST00000580907 736 ntTSL 2 BASIC5.82□□□□□ -1.48
TNFSF4P23510 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
TNFSF4P23510 AL606834.3-201ENST00000602615 496 ntBASIC5.82□□□□□ -1.48
TNFSF4P23510 AC093673.2-201ENST00000609674 331 ntBASIC5.82□□□□□ -1.48
TNFSF4P23510 Six3os1_4.1-201ENST00000615706 324 ntBASIC5.82□□□□□ -1.48
TNFSF4P23510 CCL15-204ENST00000617897 1073 ntAPPRIS P2 TSL 1 (best) BASIC5.82□□□□□ -1.48
TNFSF4P23510 FRG1HP-204ENST00000617940 757 ntBASIC5.82□□□□□ -1.48
TNFSF4P23510 AC022079.2-201ENST00000619739 566 ntBASIC5.82□□□□□ -1.48
TNFSF4P23510 AC005858.3-201ENST00000624756 589 ntBASIC5.82□□□□□ -1.48
TNFSF4P23510 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC5.82□□□□□ -1.48
TNFSF4P23510 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
TNFSF4P23510 AL590396.4-201ENST00000636779 956 ntBASIC5.82□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 150.8 ms