Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 LINC01013-201ENST00000422700 1831 ntTSL 5 BASIC7.99□□□□□ -1.13
ERCC3P19447 USP32-214ENST00000592339 4045 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
ERCC3P19447 NFX1-203ENST00000379540 4604 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
ERCC3P19447 ALPK2-201ENST00000361673 7303 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
ERCC3P19447 GMFG-201ENST00000253054 616 ntTSL 5 BASIC7.99□□□□□ -1.13
ERCC3P19447 RNU6-1017P-201ENST00000363613 106 ntBASIC7.99□□□□□ -1.13
ERCC3P19447 RNU6-236P-201ENST00000363886 106 ntBASIC7.99□□□□□ -1.13
ERCC3P19447 RN7SKP250-201ENST00000363924 321 ntBASIC7.99□□□□□ -1.13
ERCC3P19447 FABP3-201ENST00000373713 725 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
ERCC3P19447 PPP3R2-201ENST00000374806 3387 ntAPPRIS P1 BASIC7.99□□□□□ -1.13
ERCC3P19447 BTN3A2-203ENST00000396934 3672 ntAPPRIS ALT2 TSL 2 BASIC7.99□□□□□ -1.13
ERCC3P19447 AL049545.1-201ENST00000401856 572 ntBASIC7.99□□□□□ -1.13
ERCC3P19447 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
ERCC3P19447 AL713923.1-201ENST00000414071 378 ntTSL 5 BASIC7.99□□□□□ -1.13
ERCC3P19447 AC107081.1-201ENST00000414975 361 ntBASIC7.99□□□□□ -1.13
ERCC3P19447 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC7.99□□□□□ -1.13
ERCC3P19447 SETP9-201ENST00000423837 832 ntBASIC7.99□□□□□ -1.13
ERCC3P19447 AC128677.1-201ENST00000436016 442 ntBASIC7.99□□□□□ -1.13
ERCC3P19447 AL138899.2-201ENST00000439139 499 ntBASIC7.99□□□□□ -1.13
ERCC3P19447 AC010240.2-201ENST00000445363 1205 ntBASIC7.99□□□□□ -1.13
ERCC3P19447 AC004022.1-201ENST00000447766 1066 ntBASIC7.99□□□□□ -1.13
ERCC3P19447 AL589880.1-201ENST00000448271 287 ntBASIC7.99□□□□□ -1.13
ERCC3P19447 POT1-AS1-204ENST00000449642 3238 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
ERCC3P19447 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC7.99□□□□□ -1.13
ERCC3P19447 AL035407.2-201ENST00000454090 378 ntBASIC7.99□□□□□ -1.13
ERCC3P19447 RPS7P10-201ENST00000464254 603 ntBASIC7.99□□□□□ -1.13
ERCC3P19447 NDUFA5P9-201ENST00000472609 340 ntBASIC7.99□□□□□ -1.13
ERCC3P19447 AP005202.1-201ENST00000489915 867 ntBASIC7.99□□□□□ -1.13
ERCC3P19447 AC022126.1-201ENST00000502995 593 ntTSL 4 BASIC7.99□□□□□ -1.13
ERCC3P19447 AC006487.2-201ENST00000503624 577 ntTSL 4 BASIC7.99□□□□□ -1.13
ERCC3P19447 AC105313.1-201ENST00000509121 353 ntBASIC7.99□□□□□ -1.13
ERCC3P19447 AC074087.1-201ENST00000512059 724 ntBASIC7.99□□□□□ -1.13
ERCC3P19447 AC027801.3-201ENST00000515049 698 ntBASIC7.99□□□□□ -1.13
ERCC3P19447 MTHFD2P4-201ENST00000515074 1025 ntBASIC7.99□□□□□ -1.13
ERCC3P19447 RN7SKP98-201ENST00000517070 156 ntBASIC7.99□□□□□ -1.13
ERCC3P19447 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC7.99□□□□□ -1.13
ERCC3P19447 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC7.99□□□□□ -1.13
ERCC3P19447 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC7.99□□□□□ -1.13
ERCC3P19447 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC7.99□□□□□ -1.13
ERCC3P19447 AC007834.2-201ENST00000536310 343 ntBASIC7.99□□□□□ -1.13
ERCC3P19447 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC7.99□□□□□ -1.13
ERCC3P19447 KLRD1-209ENST00000543420 802 ntTSL 5 BASIC7.99□□□□□ -1.13
ERCC3P19447 AC027288.1-201ENST00000548359 816 ntTSL 3 BASIC7.99□□□□□ -1.13
ERCC3P19447 AC068305.2-201ENST00000550567 1205 ntBASIC7.99□□□□□ -1.13
ERCC3P19447 AC136285.2-201ENST00000562873 378 ntTSL 3 BASIC7.99□□□□□ -1.13
ERCC3P19447 CYP2C60P-201ENST00000566088 139 ntBASIC7.99□□□□□ -1.13
ERCC3P19447 MIR4732-201ENST00000581873 76 ntBASIC7.99□□□□□ -1.13
ERCC3P19447 AC015911.2-201ENST00000585536 396 ntTSL 3 BASIC7.99□□□□□ -1.13
ERCC3P19447 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC7.99□□□□□ -1.13
ERCC3P19447 AL049844.2-201ENST00000604280 628 ntBASIC7.99□□□□□ -1.13
ERCC3P19447 AC096586.1-201ENST00000610267 561 ntBASIC7.99□□□□□ -1.13
ERCC3P19447 AC084782.3-201ENST00000612282 578 ntBASIC7.99□□□□□ -1.13
ERCC3P19447 AC010975.3-201ENST00000618727 978 ntBASIC7.99□□□□□ -1.13
ERCC3P19447 AP005212.3-201ENST00000619964 528 ntBASIC7.99□□□□□ -1.13
ERCC3P19447 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC7.99□□□□□ -1.13
ERCC3P19447 KIAA1549L-202ENST00000321505 11678 ntAPPRIS P2 TSL 1 (best) BASIC7.99□□□□□ -1.13
ERCC3P19447 ANK2-212ENST00000506722 8051 ntAPPRIS ALT2 TSL 1 (best) BASIC7.99□□□□□ -1.13
ERCC3P19447 LCP1-202ENST00000398576 3944 ntAPPRIS P1 TSL 5 BASIC7.99□□□□□ -1.13
ERCC3P19447 ARL14EPL-201ENST00000601302 1914 ntAPPRIS P1 TSL 5 BASIC7.99□□□□□ -1.13
ERCC3P19447 RAG1-201ENST00000299440 6564 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
ERCC3P19447 AC090771.1-201ENST00000585803 1618 ntBASIC7.99□□□□□ -1.13
ERCC3P19447 ZNF876P-202ENST00000398732 1485 ntBASIC7.99□□□□□ -1.13
ERCC3P19447 SLC14A1-221ENST00000619403 3823 ntTSL 5 BASIC7.99□□□□□ -1.13
ERCC3P19447 GPATCH2-202ENST00000366935 5851 ntAPPRIS P1 TSL 2 BASIC7.99□□□□□ -1.13
ERCC3P19447 AP002026.1-201ENST00000500358 4825 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
ERCC3P19447 NCOA4P2-201ENST00000340589 1813 ntBASIC7.99□□□□□ -1.13
ERCC3P19447 KLHL5-201ENST00000261425 3425 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
ERCC3P19447 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
ERCC3P19447 AC036214.3-201ENST00000522938 1527 ntAPPRIS P1 TSL 2 BASIC7.98□□□□□ -1.13
ERCC3P19447 PPP2R3A-202ENST00000334546 2196 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
ERCC3P19447 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
ERCC3P19447 NFIB-221ENST00000637742 2166 ntTSL 5 BASIC7.98□□□□□ -1.13
ERCC3P19447 AL671511.1-201ENST00000425033 3458 ntTSL 2 BASIC7.98□□□□□ -1.13
ERCC3P19447 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
ERCC3P19447 AC017007.4-201ENST00000503353 1352 ntBASIC7.98□□□□□ -1.13
ERCC3P19447 ITGA1-201ENST00000282588 10757 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
ERCC3P19447 PCDH15-231ENST00000617271 6425 ntAPPRIS P3 TSL 5 BASIC7.98□□□□□ -1.13
ERCC3P19447 BEST3-212ENST00000553096 2929 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
ERCC3P19447 SELP-203ENST00000367788 2427 ntAPPRIS ALT2 TSL 5 BASIC7.98□□□□□ -1.13
ERCC3P19447 CAP1P2-201ENST00000417455 1409 ntBASIC7.98□□□□□ -1.13
ERCC3P19447 VDAC2-214ENST00000543351 1424 ntAPPRIS P1 TSL 5 BASIC7.98□□□□□ -1.13
ERCC3P19447 OSBPL6-207ENST00000409631 3273 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
ERCC3P19447 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC7.98□□□□□ -1.13
ERCC3P19447 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC7.98□□□□□ -1.13
ERCC3P19447 ATF7IP-222ENST00000544627 4847 ntAPPRIS ALT2 TSL 1 (best) BASIC7.98□□□□□ -1.13
ERCC3P19447 RNU4-31P-201ENST00000384211 141 ntBASIC7.98□□□□□ -1.13
ERCC3P19447 Y_RNA.472-201ENST00000384322 102 ntBASIC7.98□□□□□ -1.13
ERCC3P19447 SNORD65C-201ENST00000390962 71 ntBASIC7.98□□□□□ -1.13
ERCC3P19447 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC7.98□□□□□ -1.13
ERCC3P19447 FDPSP5-201ENST00000399474 1057 ntBASIC7.98□□□□□ -1.13
ERCC3P19447 AC012462.2-201ENST00000414756 391 ntTSL 3 BASIC7.98□□□□□ -1.13
ERCC3P19447 HIGD1AP12-201ENST00000427832 281 ntBASIC7.98□□□□□ -1.13
ERCC3P19447 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC7.98□□□□□ -1.13
ERCC3P19447 AL592437.1-201ENST00000443781 492 ntBASIC7.98□□□□□ -1.13
ERCC3P19447 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC7.98□□□□□ -1.13
ERCC3P19447 PTENP1-201ENST00000447117 1215 ntBASIC7.98□□□□□ -1.13
ERCC3P19447 AC244505.3-201ENST00000454598 187 ntBASIC7.98□□□□□ -1.13
ERCC3P19447 HSPE1P22-201ENST00000456856 327 ntBASIC7.98□□□□□ -1.13
ERCC3P19447 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC7.98□□□□□ -1.13
ERCC3P19447 RBMY2HP-201ENST00000457961 720 ntBASIC7.98□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 118.9 ms