Protein–RNA interactions for Protein: P01574

IFNB1, Interferon beta, humanhuman

Predictions only

Length 187 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNB1P01574 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
IFNB1P01574 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
IFNB1P01574 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC6.11□□□□□ -1.43
IFNB1P01574 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
IFNB1P01574 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC6.11□□□□□ -1.43
IFNB1P01574 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC6.11□□□□□ -1.43
IFNB1P01574 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC6.11□□□□□ -1.43
IFNB1P01574 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC6.11□□□□□ -1.43
IFNB1P01574 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
IFNB1P01574 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
IFNB1P01574 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
IFNB1P01574 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
IFNB1P01574 MTCO1P28-201ENST00000574177 1528 ntBASIC6.11□□□□□ -1.43
IFNB1P01574 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
IFNB1P01574 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
IFNB1P01574 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
IFNB1P01574 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC6.11□□□□□ -1.43
IFNB1P01574 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
IFNB1P01574 MTHFD2P5-201ENST00000320415 844 ntBASIC6.11□□□□□ -1.43
IFNB1P01574 RNA5SP211-201ENST00000365516 117 ntBASIC6.11□□□□□ -1.43
IFNB1P01574 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC6.11□□□□□ -1.43
IFNB1P01574 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
IFNB1P01574 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
IFNB1P01574 RN7SKP17-201ENST00000411242 351 ntBASIC6.11□□□□□ -1.43
IFNB1P01574 RN7SKP108-201ENST00000411367 328 ntBASIC6.11□□□□□ -1.43
IFNB1P01574 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC6.11□□□□□ -1.43
IFNB1P01574 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC6.11□□□□□ -1.43
IFNB1P01574 RPL7AP51-201ENST00000422016 760 ntBASIC6.11□□□□□ -1.43
IFNB1P01574 AC099677.3-201ENST00000427081 395 ntBASIC6.11□□□□□ -1.43
IFNB1P01574 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC6.11□□□□□ -1.43
IFNB1P01574 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
IFNB1P01574 AC064862.5-201ENST00000440618 334 ntBASIC6.11□□□□□ -1.43
IFNB1P01574 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC6.11□□□□□ -1.43
IFNB1P01574 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC6.11□□□□□ -1.43
IFNB1P01574 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC6.11□□□□□ -1.43
IFNB1P01574 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC6.11□□□□□ -1.43
IFNB1P01574 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC6.11□□□□□ -1.43
IFNB1P01574 OR7E22P-201ENST00000478335 1035 ntBASIC6.11□□□□□ -1.43
IFNB1P01574 RPL38P3-201ENST00000484463 213 ntBASIC6.11□□□□□ -1.43
IFNB1P01574 SNRPCP11-201ENST00000492453 205 ntBASIC6.11□□□□□ -1.43
IFNB1P01574 HMGN1P17-201ENST00000513734 295 ntBASIC6.11□□□□□ -1.43
IFNB1P01574 AC025766.1-201ENST00000514061 409 ntTSL 5 BASIC6.11□□□□□ -1.43
IFNB1P01574 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
IFNB1P01574 AP003080.1-202ENST00000526526 915 ntBASIC6.11□□□□□ -1.43
IFNB1P01574 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
IFNB1P01574 AC090791.1-201ENST00000530960 492 ntTSL 3 BASIC6.11□□□□□ -1.43
IFNB1P01574 ASB8-203ENST00000535988 679 ntTSL 2 BASIC6.11□□□□□ -1.43
IFNB1P01574 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC6.11□□□□□ -1.43
IFNB1P01574 RPGRIP1L-208ENST00000566096 893 ntTSL 2 BASIC6.11□□□□□ -1.43
IFNB1P01574 AC010547.7-201ENST00000570323 333 ntBASIC6.11□□□□□ -1.43
IFNB1P01574 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
IFNB1P01574 CCDC58P1-201ENST00000578567 430 ntBASIC6.11□□□□□ -1.43
IFNB1P01574 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC6.11□□□□□ -1.43
IFNB1P01574 AP001357.1-201ENST00000586304 1053 ntBASIC6.11□□□□□ -1.43
IFNB1P01574 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC6.11□□□□□ -1.43
IFNB1P01574 AC073333.2-201ENST00000603589 769 ntBASIC6.11□□□□□ -1.43
IFNB1P01574 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC6.11□□□□□ -1.43
IFNB1P01574 C5orf63-208ENST00000607731 478 ntTSL 5 BASIC6.11□□□□□ -1.43
IFNB1P01574 AC093388.1-201ENST00000609166 430 ntBASIC6.11□□□□□ -1.43
IFNB1P01574 AC092681.3-201ENST00000609463 678 ntBASIC6.11□□□□□ -1.43
IFNB1P01574 AL135999.3-201ENST00000610501 812 ntBASIC6.11□□□□□ -1.43
IFNB1P01574 AL080312.2-201ENST00000613001 630 ntBASIC6.11□□□□□ -1.43
IFNB1P01574 AL355974.3-201ENST00000617383 467 ntBASIC6.11□□□□□ -1.43
IFNB1P01574 Metazoa_SRP.81-201ENST00000618466 316 ntBASIC6.11□□□□□ -1.43
IFNB1P01574 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC6.11□□□□□ -1.43
IFNB1P01574 AP000550.3-201ENST00000637734 379 ntBASIC6.11□□□□□ -1.43
IFNB1P01574 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC6.11□□□□□ -1.43
IFNB1P01574 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC6.11□□□□□ -1.43
IFNB1P01574 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
IFNB1P01574 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
IFNB1P01574 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
IFNB1P01574 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
IFNB1P01574 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC6.11□□□□□ -1.43
IFNB1P01574 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
IFNB1P01574 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
IFNB1P01574 TCF12-205ENST00000537840 1598 ntTSL 2 BASIC6.1□□□□□ -1.43
IFNB1P01574 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
IFNB1P01574 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC6.1□□□□□ -1.43
IFNB1P01574 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
IFNB1P01574 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC6.1□□□□□ -1.43
IFNB1P01574 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
IFNB1P01574 AC244033.1-201ENST00000426826 870 ntBASIC6.1□□□□□ -1.43
IFNB1P01574 AL663074.2-201ENST00000440621 479 ntBASIC6.1□□□□□ -1.43
IFNB1P01574 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC6.1□□□□□ -1.43
IFNB1P01574 SERPINA7P1-201ENST00000443077 631 ntBASIC6.1□□□□□ -1.43
IFNB1P01574 LINC01370-202ENST00000445606 731 ntTSL 5 BASIC6.1□□□□□ -1.43
IFNB1P01574 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
IFNB1P01574 RPS27P20-201ENST00000492051 246 ntBASIC6.1□□□□□ -1.43
IFNB1P01574 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC6.1□□□□□ -1.43
IFNB1P01574 RNA5SP441-201ENST00000516809 88 ntBASIC6.1□□□□□ -1.43
IFNB1P01574 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC6.1□□□□□ -1.43
IFNB1P01574 AC078899.1-201ENST00000521432 1185 ntBASIC6.1□□□□□ -1.43
IFNB1P01574 LDHC-203ENST00000535809 757 ntTSL 5 BASIC6.1□□□□□ -1.43
IFNB1P01574 LDHC-205ENST00000537486 583 ntTSL 5 BASIC6.1□□□□□ -1.43
IFNB1P01574 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC6.1□□□□□ -1.43
IFNB1P01574 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC6.1□□□□□ -1.43
IFNB1P01574 NQO2-209ENST00000606474 470 ntTSL 3 BASIC6.1□□□□□ -1.43
IFNB1P01574 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
IFNB1P01574 AL357562.1-201ENST00000624911 609 ntBASIC6.1□□□□□ -1.43
IFNB1P01574 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC6.1□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 123.4 ms