Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC5.7□□□□□ -1.5
CLPTM1O96005 AL356121.1-201ENST00000442911 156 ntBASIC5.7□□□□□ -1.5
CLPTM1O96005 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC5.7□□□□□ -1.5
CLPTM1O96005 GAPDHP33-201ENST00000443168 1013 ntBASIC5.7□□□□□ -1.5
CLPTM1O96005 AL031681.1-201ENST00000443304 400 ntBASIC5.7□□□□□ -1.5
CLPTM1O96005 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC5.7□□□□□ -1.5
CLPTM1O96005 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CLPTM1O96005 RAB28P2-201ENST00000454299 641 ntBASIC5.7□□□□□ -1.5
CLPTM1O96005 CEACAMP11-201ENST00000455211 583 ntBASIC5.7□□□□□ -1.5
CLPTM1O96005 AC015524.1-201ENST00000491585 472 ntBASIC5.7□□□□□ -1.5
CLPTM1O96005 AP000926.3-201ENST00000497201 299 ntBASIC5.7□□□□□ -1.5
CLPTM1O96005 RN7SL612P-201ENST00000497704 295 ntBASIC5.7□□□□□ -1.5
CLPTM1O96005 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CLPTM1O96005 AC020937.1-201ENST00000519677 1013 ntBASIC5.7□□□□□ -1.5
CLPTM1O96005 AC008429.2-201ENST00000523057 864 ntBASIC5.7□□□□□ -1.5
CLPTM1O96005 OR6M2P-201ENST00000529831 871 ntBASIC5.7□□□□□ -1.5
CLPTM1O96005 RPA2P3-201ENST00000533268 770 ntBASIC5.7□□□□□ -1.5
CLPTM1O96005 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC5.7□□□□□ -1.5
CLPTM1O96005 AL359219.2-201ENST00000555184 348 ntBASIC5.7□□□□□ -1.5
CLPTM1O96005 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC5.7□□□□□ -1.5
CLPTM1O96005 AC009852.2-201ENST00000567898 485 ntBASIC5.7□□□□□ -1.5
CLPTM1O96005 AC090616.1-201ENST00000583895 447 ntBASIC5.7□□□□□ -1.5
CLPTM1O96005 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC5.7□□□□□ -1.5
CLPTM1O96005 ZNF137P-202ENST00000597158 308 ntTSL 3 BASIC5.7□□□□□ -1.5
CLPTM1O96005 Z95327.3-201ENST00000610385 572 ntBASIC5.7□□□□□ -1.5
CLPTM1O96005 RNASE11-211ENST00000620912 883 ntAPPRIS P2 TSL 1 (best) BASIC5.7□□□□□ -1.5
CLPTM1O96005 TEX41-255ENST00000626404 610 ntTSL 5 BASIC5.7□□□□□ -1.5
CLPTM1O96005 AC007603.3-201ENST00000636915 979 ntBASIC5.7□□□□□ -1.5
CLPTM1O96005 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CLPTM1O96005 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.7□□□□□ -1.5
CLPTM1O96005 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
CLPTM1O96005 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CLPTM1O96005 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CLPTM1O96005 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CLPTM1O96005 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CLPTM1O96005 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.69□□□□□ -1.5
CLPTM1O96005 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CLPTM1O96005 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC5.69□□□□□ -1.5
CLPTM1O96005 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CLPTM1O96005 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC5.69□□□□□ -1.5
CLPTM1O96005 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CLPTM1O96005 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.69□□□□□ -1.5
CLPTM1O96005 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CLPTM1O96005 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CLPTM1O96005 PPIAP24-201ENST00000328558 471 ntBASIC5.69□□□□□ -1.5
CLPTM1O96005 ARGFX-201ENST00000334384 992 ntAPPRIS P1 TSL 3 BASIC5.69□□□□□ -1.5
CLPTM1O96005 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC5.69□□□□□ -1.5
CLPTM1O96005 RNA5SP279-201ENST00000365513 117 ntBASIC5.69□□□□□ -1.5
CLPTM1O96005 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
CLPTM1O96005 U3.52-201ENST00000384034 216 ntBASIC5.69□□□□□ -1.5
CLPTM1O96005 TRAV35-201ENST00000390462 330 ntBASIC5.69□□□□□ -1.5
CLPTM1O96005 AL358178.1-201ENST00000407698 397 ntBASIC5.69□□□□□ -1.5
CLPTM1O96005 UBTFL2-201ENST00000411859 1191 ntBASIC5.69□□□□□ -1.5
CLPTM1O96005 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC5.69□□□□□ -1.5
CLPTM1O96005 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC5.69□□□□□ -1.5
CLPTM1O96005 AC244033.1-201ENST00000426826 870 ntBASIC5.69□□□□□ -1.5
CLPTM1O96005 BBIP1-205ENST00000436562 383 ntAPPRIS P1 TSL 3 BASIC5.69□□□□□ -1.5
CLPTM1O96005 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC5.69□□□□□ -1.5
CLPTM1O96005 NPM1P23-201ENST00000440193 849 ntBASIC5.69□□□□□ -1.5
CLPTM1O96005 AC064862.5-201ENST00000440618 334 ntBASIC5.69□□□□□ -1.5
CLPTM1O96005 AL136460.1-201ENST00000442389 473 ntTSL 3 BASIC5.69□□□□□ -1.5
CLPTM1O96005 AC092601.1-201ENST00000444526 383 ntBASIC5.69□□□□□ -1.5
CLPTM1O96005 AL162739.1-201ENST00000450606 307 ntBASIC5.69□□□□□ -1.5
CLPTM1O96005 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC5.69□□□□□ -1.5
CLPTM1O96005 SNRPCP11-201ENST00000492453 205 ntBASIC5.69□□□□□ -1.5
CLPTM1O96005 NACAP5-201ENST00000509863 636 ntBASIC5.69□□□□□ -1.5
CLPTM1O96005 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC5.69□□□□□ -1.5
CLPTM1O96005 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC5.69□□□□□ -1.5
CLPTM1O96005 COX6B1P4-201ENST00000519826 484 ntBASIC5.69□□□□□ -1.5
CLPTM1O96005 AC024145.1-201ENST00000535324 775 ntTSL 3 BASIC5.69□□□□□ -1.5
CLPTM1O96005 MIR212-201ENST00000586026 110 ntBASIC5.69□□□□□ -1.5
CLPTM1O96005 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC5.69□□□□□ -1.5
CLPTM1O96005 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.69□□□□□ -1.5
CLPTM1O96005 AC012175.1-201ENST00000603755 531 ntBASIC5.69□□□□□ -1.5
CLPTM1O96005 RNU6-84P-201ENST00000607737 102 ntBASIC5.69□□□□□ -1.5
CLPTM1O96005 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.69□□□□□ -1.5
CLPTM1O96005 OR51C1P-201ENST00000608504 942 ntBASIC5.69□□□□□ -1.5
CLPTM1O96005 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC5.69□□□□□ -1.5
CLPTM1O96005 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC5.69□□□□□ -1.5
CLPTM1O96005 NF1P10-201ENST00000613227 742 ntBASIC5.69□□□□□ -1.5
CLPTM1O96005 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC5.69□□□□□ -1.5
CLPTM1O96005 AF117829.2-201ENST00000619538 361 ntBASIC5.69□□□□□ -1.5
CLPTM1O96005 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC5.69□□□□□ -1.5
CLPTM1O96005 AC073488.9-201ENST00000631601 754 ntBASIC5.69□□□□□ -1.5
CLPTM1O96005 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC5.69□□□□□ -1.5
CLPTM1O96005 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CLPTM1O96005 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CLPTM1O96005 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
CLPTM1O96005 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
CLPTM1O96005 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.69□□□□□ -1.5
CLPTM1O96005 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC5.69□□□□□ -1.5
CLPTM1O96005 MAK-205ENST00000538030 2459 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CLPTM1O96005 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CLPTM1O96005 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.69□□□□□ -1.5
CLPTM1O96005 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.69□□□□□ -1.5
CLPTM1O96005 AL034546.1-201ENST00000623740 3693 ntBASIC5.69□□□□□ -1.5
CLPTM1O96005 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.69□□□□□ -1.5
CLPTM1O96005 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CLPTM1O96005 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CLPTM1O96005 LRRC37A15P-201ENST00000514785 1355 ntBASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 508.9 ms