Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.74□□□□□ -1.49
SLC28A1O00337 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SLC28A1O00337 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC5.74□□□□□ -1.49
SLC28A1O00337 RNU11-201ENST00000387069 134 ntBASIC5.74□□□□□ -1.49
SLC28A1O00337 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SLC28A1O00337 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC5.74□□□□□ -1.49
SLC28A1O00337 AC099677.3-201ENST00000427081 395 ntBASIC5.74□□□□□ -1.49
SLC28A1O00337 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.74□□□□□ -1.49
SLC28A1O00337 TRGC2-201ENST00000436911 1013 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
SLC28A1O00337 AC096632.2-201ENST00000438139 1239 ntBASIC5.74□□□□□ -1.49
SLC28A1O00337 AC097359.1-201ENST00000447946 463 ntBASIC5.74□□□□□ -1.49
SLC28A1O00337 AC099670.1-201ENST00000455141 783 ntBASIC5.74□□□□□ -1.49
SLC28A1O00337 RN7SL552P-201ENST00000462094 276 ntBASIC5.74□□□□□ -1.49
SLC28A1O00337 OR7E22P-201ENST00000478335 1035 ntBASIC5.74□□□□□ -1.49
SLC28A1O00337 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC5.74□□□□□ -1.49
SLC28A1O00337 AC138409.2-202ENST00000507274 458 ntBASIC5.74□□□□□ -1.49
SLC28A1O00337 ZNF519P4-201ENST00000514008 125 ntBASIC5.74□□□□□ -1.49
SLC28A1O00337 CR383658.1-201ENST00000514609 734 ntBASIC5.74□□□□□ -1.49
SLC28A1O00337 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC5.74□□□□□ -1.49
SLC28A1O00337 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC5.74□□□□□ -1.49
SLC28A1O00337 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC5.74□□□□□ -1.49
SLC28A1O00337 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC5.74□□□□□ -1.49
SLC28A1O00337 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC5.74□□□□□ -1.49
SLC28A1O00337 AL360012.1-201ENST00000602813 131 ntBASIC5.74□□□□□ -1.49
SLC28A1O00337 AC096586.2-201ENST00000610260 441 ntBASIC5.74□□□□□ -1.49
SLC28A1O00337 AL445670.1-201ENST00000618889 801 ntBASIC5.74□□□□□ -1.49
SLC28A1O00337 AL357562.1-201ENST00000624911 609 ntBASIC5.74□□□□□ -1.49
SLC28A1O00337 UGP2-232ENST00000640075 567 ntTSL 5 BASIC5.74□□□□□ -1.49
SLC28A1O00337 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC5.74□□□□□ -1.49
SLC28A1O00337 TCF12-205ENST00000537840 1598 ntTSL 2 BASIC5.74□□□□□ -1.49
SLC28A1O00337 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC5.74□□□□□ -1.49
SLC28A1O00337 AL121839.2-201ENST00000565058 6943 ntBASIC5.74□□□□□ -1.49
SLC28A1O00337 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.74□□□□□ -1.49
SLC28A1O00337 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
SLC28A1O00337 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
SLC28A1O00337 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
SLC28A1O00337 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC5.74□□□□□ -1.49
SLC28A1O00337 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
SLC28A1O00337 BX284613.1-201ENST00000452221 1641 ntBASIC5.74□□□□□ -1.49
SLC28A1O00337 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
SLC28A1O00337 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
SLC28A1O00337 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
SLC28A1O00337 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC5.73□□□□□ -1.49
SLC28A1O00337 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SLC28A1O00337 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
SLC28A1O00337 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
SLC28A1O00337 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SLC28A1O00337 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC5.73□□□□□ -1.49
SLC28A1O00337 MIR551B-201ENST00000384984 96 ntBASIC5.73□□□□□ -1.49
SLC28A1O00337 CCL7-202ENST00000394627 696 ntTSL 3 BASIC5.73□□□□□ -1.49
SLC28A1O00337 RPL11P3-201ENST00000395256 523 ntBASIC5.73□□□□□ -1.49
SLC28A1O00337 FIGN-202ENST00000409634 746 ntTSL 5 BASIC5.73□□□□□ -1.49
SLC28A1O00337 AC009965.1-201ENST00000411436 570 ntTSL 4 BASIC5.73□□□□□ -1.49
SLC28A1O00337 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC5.73□□□□□ -1.49
SLC28A1O00337 METTL15P3-201ENST00000415522 1221 ntBASIC5.73□□□□□ -1.49
SLC28A1O00337 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC5.73□□□□□ -1.49
SLC28A1O00337 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
SLC28A1O00337 FTLP8-201ENST00000446770 267 ntBASIC5.73□□□□□ -1.49
SLC28A1O00337 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
SLC28A1O00337 PDCL3P4-201ENST00000489621 720 ntBASIC5.73□□□□□ -1.49
SLC28A1O00337 AP002453.1-201ENST00000492327 668 ntBASIC5.73□□□□□ -1.49
SLC28A1O00337 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC5.73□□□□□ -1.49
SLC28A1O00337 AP001960.1-201ENST00000506494 658 ntBASIC5.73□□□□□ -1.49
SLC28A1O00337 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC5.73□□□□□ -1.49
SLC28A1O00337 HMGN1P16-201ENST00000508308 283 ntBASIC5.73□□□□□ -1.49
SLC28A1O00337 COX6C-205ENST00000520468 1098 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SLC28A1O00337 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC5.73□□□□□ -1.49
SLC28A1O00337 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
SLC28A1O00337 AC090424.1-201ENST00000535243 736 ntBASIC5.73□□□□□ -1.49
SLC28A1O00337 LDHC-203ENST00000535809 757 ntTSL 5 BASIC5.73□□□□□ -1.49
SLC28A1O00337 AL121594.2-201ENST00000541658 472 ntBASIC5.73□□□□□ -1.49
SLC28A1O00337 AP000619.2-201ENST00000546014 969 ntBASIC5.73□□□□□ -1.49
SLC28A1O00337 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC5.73□□□□□ -1.49
SLC28A1O00337 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
SLC28A1O00337 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC5.73□□□□□ -1.49
SLC28A1O00337 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC5.73□□□□□ -1.49
SLC28A1O00337 AC090826.1-203ENST00000569235 490 ntBASIC5.73□□□□□ -1.49
SLC28A1O00337 AC010547.7-201ENST00000570323 333 ntBASIC5.73□□□□□ -1.49
SLC28A1O00337 STARD6-202ENST00000577499 696 ntTSL 2 BASIC5.73□□□□□ -1.49
SLC28A1O00337 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC5.73□□□□□ -1.49
SLC28A1O00337 WBP1LP11-201ENST00000586141 328 ntBASIC5.73□□□□□ -1.49
SLC28A1O00337 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC5.73□□□□□ -1.49
SLC28A1O00337 NDUFB9P1-201ENST00000604683 510 ntBASIC5.73□□□□□ -1.49
SLC28A1O00337 AC022001.1-201ENST00000605193 268 ntBASIC5.73□□□□□ -1.49
SLC28A1O00337 AL133481.2-203ENST00000607558 139 ntBASIC5.73□□□□□ -1.49
SLC28A1O00337 AL080312.2-201ENST00000613001 630 ntBASIC5.73□□□□□ -1.49
SLC28A1O00337 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC5.73□□□□□ -1.49
SLC28A1O00337 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
SLC28A1O00337 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
SLC28A1O00337 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SLC28A1O00337 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SLC28A1O00337 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC5.73□□□□□ -1.49
SLC28A1O00337 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC5.73□□□□□ -1.49
SLC28A1O00337 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.73□□□□□ -1.49
SLC28A1O00337 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC5.73□□□□□ -1.49
SLC28A1O00337 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SLC28A1O00337 WDR95P-201ENST00000425638 1542 ntBASIC5.73□□□□□ -1.49
SLC28A1O00337 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SLC28A1O00337 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
SLC28A1O00337 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC5.73□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms