Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
TRAV27A0A087WT01 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
TRAV27A0A087WT01 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC5.27□□□□□ -1.57
TRAV27A0A087WT01 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
TRAV27A0A087WT01 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
TRAV27A0A087WT01 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC5.27□□□□□ -1.57
TRAV27A0A087WT01 AC027279.4-201ENST00000624371 2072 ntBASIC5.27□□□□□ -1.57
TRAV27A0A087WT01 AC114774.1-201ENST00000507410 1770 ntBASIC5.27□□□□□ -1.57
TRAV27A0A087WT01 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
TRAV27A0A087WT01 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
TRAV27A0A087WT01 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
TRAV27A0A087WT01 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC5.26□□□□□ -1.57
TRAV27A0A087WT01 DYNC2LI1-210ENST00000605786 1346 ntAPPRIS ALT1 TSL 1 (best) BASIC5.26□□□□□ -1.57
TRAV27A0A087WT01 ZNF402P-201ENST00000404435 3100 ntBASIC5.26□□□□□ -1.57
TRAV27A0A087WT01 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
TRAV27A0A087WT01 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
TRAV27A0A087WT01 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
TRAV27A0A087WT01 BCORP1-203ENST00000513194 5093 ntBASIC5.26□□□□□ -1.57
TRAV27A0A087WT01 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
TRAV27A0A087WT01 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
TRAV27A0A087WT01 MIR130B-202ENST00000385018 82 ntBASIC5.26□□□□□ -1.57
TRAV27A0A087WT01 RNU11-201ENST00000387069 134 ntBASIC5.26□□□□□ -1.57
TRAV27A0A087WT01 RBBP4P5-201ENST00000398583 1266 ntBASIC5.26□□□□□ -1.57
TRAV27A0A087WT01 FIGN-202ENST00000409634 746 ntTSL 5 BASIC5.26□□□□□ -1.57
TRAV27A0A087WT01 FAM183DP-201ENST00000421987 399 ntBASIC5.26□□□□□ -1.57
TRAV27A0A087WT01 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC5.26□□□□□ -1.57
TRAV27A0A087WT01 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC5.26□□□□□ -1.57
TRAV27A0A087WT01 AL138921.1-201ENST00000444359 846 ntTSL 5 BASIC5.26□□□□□ -1.57
TRAV27A0A087WT01 OR52I1-201ENST00000450052 1050 ntBASIC5.26□□□□□ -1.57
TRAV27A0A087WT01 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC5.26□□□□□ -1.57
TRAV27A0A087WT01 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC5.26□□□□□ -1.57
TRAV27A0A087WT01 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC5.26□□□□□ -1.57
TRAV27A0A087WT01 AC098847.1-201ENST00000473094 348 ntBASIC5.26□□□□□ -1.57
TRAV27A0A087WT01 SH2D1A-203ENST00000477673 461 ntTSL 2 BASIC5.26□□□□□ -1.57
TRAV27A0A087WT01 AC092865.4-201ENST00000477936 615 ntBASIC5.26□□□□□ -1.57
TRAV27A0A087WT01 AC098818.1-201ENST00000478593 252 ntBASIC5.26□□□□□ -1.57
TRAV27A0A087WT01 RN7SL568P-201ENST00000493069 298 ntBASIC5.26□□□□□ -1.57
TRAV27A0A087WT01 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC5.26□□□□□ -1.57
TRAV27A0A087WT01 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC5.26□□□□□ -1.57
TRAV27A0A087WT01 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC5.26□□□□□ -1.57
TRAV27A0A087WT01 AP003033.2-201ENST00000528901 805 ntBASIC5.26□□□□□ -1.57
TRAV27A0A087WT01 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
TRAV27A0A087WT01 AC084880.3-201ENST00000535921 541 ntTSL 4 BASIC5.26□□□□□ -1.57
TRAV27A0A087WT01 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC5.26□□□□□ -1.57
TRAV27A0A087WT01 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC5.26□□□□□ -1.57
TRAV27A0A087WT01 AC121758.1-202ENST00000556917 658 ntBASIC5.26□□□□□ -1.57
TRAV27A0A087WT01 DPPA3P2-202ENST00000557188 1219 ntBASIC5.26□□□□□ -1.57
TRAV27A0A087WT01 AC092332.1-201ENST00000563684 829 ntBASIC5.26□□□□□ -1.57
TRAV27A0A087WT01 ZNF322P1-201ENST00000568013 1209 ntBASIC5.26□□□□□ -1.57
TRAV27A0A087WT01 AC145285.4-201ENST00000568183 540 ntTSL 3 BASIC5.26□□□□□ -1.57
TRAV27A0A087WT01 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC5.26□□□□□ -1.57
TRAV27A0A087WT01 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
TRAV27A0A087WT01 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC5.26□□□□□ -1.57
TRAV27A0A087WT01 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
TRAV27A0A087WT01 AL360012.1-201ENST00000602813 131 ntBASIC5.26□□□□□ -1.57
TRAV27A0A087WT01 AC145423.1-201ENST00000605712 336 ntBASIC5.26□□□□□ -1.57
TRAV27A0A087WT01 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
TRAV27A0A087WT01 AL136228.1-201ENST00000622221 319 ntBASIC5.26□□□□□ -1.57
TRAV27A0A087WT01 AC022400.9-201ENST00000623633 273 ntBASIC5.26□□□□□ -1.57
TRAV27A0A087WT01 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC5.26□□□□□ -1.57
TRAV27A0A087WT01 AC079776.5-201ENST00000641920 211 ntBASIC5.26□□□□□ -1.57
TRAV27A0A087WT01 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
TRAV27A0A087WT01 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
TRAV27A0A087WT01 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
TRAV27A0A087WT01 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.26□□□□□ -1.57
TRAV27A0A087WT01 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC5.26□□□□□ -1.57
TRAV27A0A087WT01 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.26□□□□□ -1.57
TRAV27A0A087WT01 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
TRAV27A0A087WT01 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
TRAV27A0A087WT01 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
TRAV27A0A087WT01 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
TRAV27A0A087WT01 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
TRAV27A0A087WT01 LINC02318-201ENST00000553785 1334 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
TRAV27A0A087WT01 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC5.25□□□□□ -1.57
TRAV27A0A087WT01 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
TRAV27A0A087WT01 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
TRAV27A0A087WT01 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.25□□□□□ -1.57
TRAV27A0A087WT01 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
TRAV27A0A087WT01 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
TRAV27A0A087WT01 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.25□□□□□ -1.57
TRAV27A0A087WT01 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.25□□□□□ -1.57
TRAV27A0A087WT01 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
TRAV27A0A087WT01 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
TRAV27A0A087WT01 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
TRAV27A0A087WT01 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
TRAV27A0A087WT01 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
TRAV27A0A087WT01 SNORA51.9-201ENST00000384295 124 ntBASIC5.25□□□□□ -1.57
TRAV27A0A087WT01 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
TRAV27A0A087WT01 AC087752.1-201ENST00000391360 558 ntBASIC5.25□□□□□ -1.57
TRAV27A0A087WT01 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC5.25□□□□□ -1.57
TRAV27A0A087WT01 AL096711.1-201ENST00000404780 554 ntBASIC5.25□□□□□ -1.57
TRAV27A0A087WT01 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC5.25□□□□□ -1.57
TRAV27A0A087WT01 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC5.25□□□□□ -1.57
TRAV27A0A087WT01 GAPDHP75-201ENST00000433910 943 ntBASIC5.25□□□□□ -1.57
TRAV27A0A087WT01 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
TRAV27A0A087WT01 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC5.25□□□□□ -1.57
TRAV27A0A087WT01 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC5.25□□□□□ -1.57
TRAV27A0A087WT01 AC105384.2-201ENST00000508433 640 ntBASIC5.25□□□□□ -1.57
TRAV27A0A087WT01 AC023136.1-201ENST00000513093 1105 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
TRAV27A0A087WT01 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms