Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC5.29□□□□□ -1.56
RHBDD3Q9Y3P4 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC5.29□□□□□ -1.56
RHBDD3Q9Y3P4 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC5.29□□□□□ -1.56
RHBDD3Q9Y3P4 H3F3AP5-201ENST00000475267 429 ntBASIC5.29□□□□□ -1.56
RHBDD3Q9Y3P4 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC5.29□□□□□ -1.56
RHBDD3Q9Y3P4 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC5.29□□□□□ -1.56
RHBDD3Q9Y3P4 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
RHBDD3Q9Y3P4 HMGN1P16-201ENST00000508308 283 ntBASIC5.29□□□□□ -1.56
RHBDD3Q9Y3P4 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC5.29□□□□□ -1.56
RHBDD3Q9Y3P4 GLYAT-203ENST00000529732 1070 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
RHBDD3Q9Y3P4 AC027026.1-201ENST00000532323 742 ntBASIC5.29□□□□□ -1.56
RHBDD3Q9Y3P4 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC5.29□□□□□ -1.56
RHBDD3Q9Y3P4 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC5.29□□□□□ -1.56
RHBDD3Q9Y3P4 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
RHBDD3Q9Y3P4 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC5.29□□□□□ -1.56
RHBDD3Q9Y3P4 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC5.29□□□□□ -1.56
RHBDD3Q9Y3P4 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC5.29□□□□□ -1.56
RHBDD3Q9Y3P4 AC010547.7-201ENST00000570323 333 ntBASIC5.29□□□□□ -1.56
RHBDD3Q9Y3P4 AP001357.1-201ENST00000586304 1053 ntBASIC5.29□□□□□ -1.56
RHBDD3Q9Y3P4 WBP1LP12-201ENST00000604449 331 ntBASIC5.29□□□□□ -1.56
RHBDD3Q9Y3P4 AC008555.7-201ENST00000605008 583 ntBASIC5.29□□□□□ -1.56
RHBDD3Q9Y3P4 RPSAP75-201ENST00000605848 301 ntBASIC5.29□□□□□ -1.56
RHBDD3Q9Y3P4 AC012676.3-201ENST00000614983 479 ntBASIC5.29□□□□□ -1.56
RHBDD3Q9Y3P4 Metazoa_SRP.81-201ENST00000618466 316 ntBASIC5.29□□□□□ -1.56
RHBDD3Q9Y3P4 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC5.29□□□□□ -1.56
RHBDD3Q9Y3P4 MVP-219ENST00000629059 120 ntTSL 5 BASIC5.29□□□□□ -1.56
RHBDD3Q9Y3P4 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC5.29□□□□□ -1.56
RHBDD3Q9Y3P4 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC5.29□□□□□ -1.56
RHBDD3Q9Y3P4 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
RHBDD3Q9Y3P4 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
RHBDD3Q9Y3P4 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.29□□□□□ -1.56
RHBDD3Q9Y3P4 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.29□□□□□ -1.56
RHBDD3Q9Y3P4 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
RHBDD3Q9Y3P4 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC5.29□□□□□ -1.56
RHBDD3Q9Y3P4 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
RHBDD3Q9Y3P4 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
RHBDD3Q9Y3P4 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC5.29□□□□□ -1.56
RHBDD3Q9Y3P4 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
RHBDD3Q9Y3P4 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
RHBDD3Q9Y3P4 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
RHBDD3Q9Y3P4 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
RHBDD3Q9Y3P4 LINC02019-201ENST00000608605 2060 ntBASIC5.28□□□□□ -1.56
RHBDD3Q9Y3P4 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC5.28□□□□□ -1.56
RHBDD3Q9Y3P4 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
RHBDD3Q9Y3P4 AL929601.4-201ENST00000613011 1341 ntBASIC5.28□□□□□ -1.56
RHBDD3Q9Y3P4 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
RHBDD3Q9Y3P4 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
RHBDD3Q9Y3P4 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC5.28□□□□□ -1.56
RHBDD3Q9Y3P4 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
RHBDD3Q9Y3P4 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
RHBDD3Q9Y3P4 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC5.28□□□□□ -1.56
RHBDD3Q9Y3P4 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
RHBDD3Q9Y3P4 RNA5SP375-201ENST00000362975 119 ntBASIC5.28□□□□□ -1.56
RHBDD3Q9Y3P4 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
RHBDD3Q9Y3P4 GNAT3-201ENST00000398291 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
RHBDD3Q9Y3P4 RN7SKP144-201ENST00000411108 279 ntBASIC5.28□□□□□ -1.56
RHBDD3Q9Y3P4 AC245096.1-201ENST00000413104 546 ntBASIC5.28□□□□□ -1.56
RHBDD3Q9Y3P4 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
RHBDD3Q9Y3P4 Z82198.3-201ENST00000421145 199 ntBASIC5.28□□□□□ -1.56
RHBDD3Q9Y3P4 AL034379.1-201ENST00000423216 253 ntBASIC5.28□□□□□ -1.56
RHBDD3Q9Y3P4 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC5.28□□□□□ -1.56
RHBDD3Q9Y3P4 AC013403.1-201ENST00000436954 263 ntBASIC5.28□□□□□ -1.56
RHBDD3Q9Y3P4 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
RHBDD3Q9Y3P4 AL138921.1-201ENST00000444359 846 ntTSL 5 BASIC5.28□□□□□ -1.56
RHBDD3Q9Y3P4 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC5.28□□□□□ -1.56
RHBDD3Q9Y3P4 MTND6P5-201ENST00000448266 512 ntBASIC5.28□□□□□ -1.56
RHBDD3Q9Y3P4 AL162739.1-201ENST00000450606 307 ntBASIC5.28□□□□□ -1.56
RHBDD3Q9Y3P4 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC5.28□□□□□ -1.56
RHBDD3Q9Y3P4 SEPT7P3-201ENST00000455017 621 ntBASIC5.28□□□□□ -1.56
RHBDD3Q9Y3P4 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC5.28□□□□□ -1.56
RHBDD3Q9Y3P4 PFN2-209ENST00000481275 560 ntTSL 4 BASIC5.28□□□□□ -1.56
RHBDD3Q9Y3P4 AC093815.1-201ENST00000508637 280 ntBASIC5.28□□□□□ -1.56
RHBDD3Q9Y3P4 AC095052.1-201ENST00000509955 863 ntBASIC5.28□□□□□ -1.56
RHBDD3Q9Y3P4 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC5.28□□□□□ -1.56
RHBDD3Q9Y3P4 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC5.28□□□□□ -1.56
RHBDD3Q9Y3P4 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC5.28□□□□□ -1.56
RHBDD3Q9Y3P4 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC5.28□□□□□ -1.56
RHBDD3Q9Y3P4 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC5.28□□□□□ -1.56
RHBDD3Q9Y3P4 LYRM1-208ENST00000567954 460 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
RHBDD3Q9Y3P4 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC5.28□□□□□ -1.56
RHBDD3Q9Y3P4 AC005224.3-201ENST00000584683 2140 ntBASIC5.28□□□□□ -1.56
RHBDD3Q9Y3P4 AC005479.3-201ENST00000602790 431 ntBASIC5.28□□□□□ -1.56
RHBDD3Q9Y3P4 OXSM-209ENST00000626005 309 ntTSL 3 BASIC5.28□□□□□ -1.56
RHBDD3Q9Y3P4 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC5.28□□□□□ -1.56
RHBDD3Q9Y3P4 AC010325.3-201ENST00000641084 394 ntBASIC5.28□□□□□ -1.56
RHBDD3Q9Y3P4 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
RHBDD3Q9Y3P4 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
RHBDD3Q9Y3P4 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
RHBDD3Q9Y3P4 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
RHBDD3Q9Y3P4 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
RHBDD3Q9Y3P4 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.28□□□□□ -1.56
RHBDD3Q9Y3P4 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
RHBDD3Q9Y3P4 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
RHBDD3Q9Y3P4 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
RHBDD3Q9Y3P4 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC5.28□□□□□ -1.56
RHBDD3Q9Y3P4 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC5.28□□□□□ -1.56
RHBDD3Q9Y3P4 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC5.28□□□□□ -1.56
RHBDD3Q9Y3P4 AC018717.1-201ENST00000457712 1505 ntBASIC5.28□□□□□ -1.56
RHBDD3Q9Y3P4 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
RHBDD3Q9Y3P4 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms