Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 TMA16P2-201ENST00000413187 601 ntBASIC5.62□□□□□ -1.51
NPIPA1Q9UND3 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
NPIPA1Q9UND3 SETP9-201ENST00000423837 832 ntBASIC5.62□□□□□ -1.51
NPIPA1Q9UND3 LINC01762-201ENST00000423907 454 ntTSL 5 BASIC5.62□□□□□ -1.51
NPIPA1Q9UND3 CDY8P-201ENST00000428380 1279 ntBASIC5.62□□□□□ -1.51
NPIPA1Q9UND3 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC5.62□□□□□ -1.51
NPIPA1Q9UND3 RPL12P16-201ENST00000431098 498 ntBASIC5.62□□□□□ -1.51
NPIPA1Q9UND3 AL391987.1-201ENST00000441025 200 ntBASIC5.62□□□□□ -1.51
NPIPA1Q9UND3 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC5.62□□□□□ -1.51
NPIPA1Q9UND3 CDY20P-201ENST00000447528 1279 ntBASIC5.62□□□□□ -1.51
NPIPA1Q9UND3 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC5.62□□□□□ -1.51
NPIPA1Q9UND3 CST12P-201ENST00000457644 362 ntBASIC5.62□□□□□ -1.51
NPIPA1Q9UND3 AC090589.1-201ENST00000473109 362 ntBASIC5.62□□□□□ -1.51
NPIPA1Q9UND3 AC128716.1-201ENST00000475129 166 ntBASIC5.62□□□□□ -1.51
NPIPA1Q9UND3 AC011411.1-201ENST00000509592 876 ntBASIC5.62□□□□□ -1.51
NPIPA1Q9UND3 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC5.62□□□□□ -1.51
NPIPA1Q9UND3 AC021269.1-201ENST00000526860 705 ntBASIC5.62□□□□□ -1.51
NPIPA1Q9UND3 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC5.62□□□□□ -1.51
NPIPA1Q9UND3 AP001858.2-201ENST00000536213 601 ntBASIC5.62□□□□□ -1.51
NPIPA1Q9UND3 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC5.62□□□□□ -1.51
NPIPA1Q9UND3 AC092865.1-201ENST00000544395 1023 ntBASIC5.62□□□□□ -1.51
NPIPA1Q9UND3 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
NPIPA1Q9UND3 AC068305.2-201ENST00000550567 1205 ntBASIC5.62□□□□□ -1.51
NPIPA1Q9UND3 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC5.62□□□□□ -1.51
NPIPA1Q9UND3 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC5.62□□□□□ -1.51
NPIPA1Q9UND3 AL009031.1-202ENST00000632370 886 ntTSL 3 BASIC5.62□□□□□ -1.51
NPIPA1Q9UND3 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC5.62□□□□□ -1.51
NPIPA1Q9UND3 DPY19L1P1-201ENST00000417811 2594 ntBASIC5.62□□□□□ -1.51
NPIPA1Q9UND3 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
NPIPA1Q9UND3 CCNT2P1-201ENST00000423082 1315 ntBASIC5.62□□□□□ -1.51
NPIPA1Q9UND3 KARSP1-201ENST00000451871 1752 ntBASIC5.62□□□□□ -1.51
NPIPA1Q9UND3 AL078595.2-201ENST00000605309 1780 ntBASIC5.62□□□□□ -1.51
NPIPA1Q9UND3 AOX3P-204ENST00000491025 2107 ntBASIC5.62□□□□□ -1.51
NPIPA1Q9UND3 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
NPIPA1Q9UND3 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
NPIPA1Q9UND3 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC5.61□□□□□ -1.51
NPIPA1Q9UND3 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC5.61□□□□□ -1.51
NPIPA1Q9UND3 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC5.61□□□□□ -1.51
NPIPA1Q9UND3 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC5.61□□□□□ -1.51
NPIPA1Q9UND3 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
NPIPA1Q9UND3 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
NPIPA1Q9UND3 RNA5SP477-201ENST00000362639 119 ntBASIC5.61□□□□□ -1.51
NPIPA1Q9UND3 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC5.61□□□□□ -1.51
NPIPA1Q9UND3 HCFC2P1-201ENST00000392864 1592 ntBASIC5.61□□□□□ -1.51
NPIPA1Q9UND3 AC005522.1-201ENST00000395416 346 ntBASIC5.61□□□□□ -1.51
NPIPA1Q9UND3 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
NPIPA1Q9UND3 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC5.61□□□□□ -1.51
NPIPA1Q9UND3 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC5.61□□□□□ -1.51
NPIPA1Q9UND3 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC5.61□□□□□ -1.51
NPIPA1Q9UND3 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC5.61□□□□□ -1.51
NPIPA1Q9UND3 AC104843.2-201ENST00000427666 297 ntBASIC5.61□□□□□ -1.51
NPIPA1Q9UND3 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC5.61□□□□□ -1.51
NPIPA1Q9UND3 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC5.61□□□□□ -1.51
NPIPA1Q9UND3 SEPT14P12-201ENST00000442280 560 ntBASIC5.61□□□□□ -1.51
NPIPA1Q9UND3 HCG14-201ENST00000444986 413 ntTSL 2 BASIC5.61□□□□□ -1.51
NPIPA1Q9UND3 RPL7L1P3-201ENST00000455249 689 ntBASIC5.61□□□□□ -1.51
NPIPA1Q9UND3 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC5.61□□□□□ -1.51
NPIPA1Q9UND3 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC5.61□□□□□ -1.51
NPIPA1Q9UND3 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC5.61□□□□□ -1.51
NPIPA1Q9UND3 RNA5SP271-201ENST00000516700 88 ntBASIC5.61□□□□□ -1.51
NPIPA1Q9UND3 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC5.61□□□□□ -1.51
NPIPA1Q9UND3 CETN3-206ENST00000522864 738 ntTSL 3 BASIC5.61□□□□□ -1.51
NPIPA1Q9UND3 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC5.61□□□□□ -1.51
NPIPA1Q9UND3 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC5.61□□□□□ -1.51
NPIPA1Q9UND3 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC5.61□□□□□ -1.51
NPIPA1Q9UND3 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC5.61□□□□□ -1.51
NPIPA1Q9UND3 RPA2P1-201ENST00000556557 721 ntBASIC5.61□□□□□ -1.51
NPIPA1Q9UND3 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC5.61□□□□□ -1.51
NPIPA1Q9UND3 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC5.61□□□□□ -1.51
NPIPA1Q9UND3 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC5.61□□□□□ -1.51
NPIPA1Q9UND3 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC5.61□□□□□ -1.51
NPIPA1Q9UND3 MIR3189-201ENST00000578735 73 ntBASIC5.61□□□□□ -1.51
NPIPA1Q9UND3 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
NPIPA1Q9UND3 AL353763.1-201ENST00000624467 1628 ntBASIC5.61□□□□□ -1.51
NPIPA1Q9UND3 AC073488.3-201ENST00000631611 778 ntBASIC5.61□□□□□ -1.51
NPIPA1Q9UND3 MIR4302-201ENST00000638058 60 ntBASIC5.61□□□□□ -1.51
NPIPA1Q9UND3 RAB9B-201ENST00000243298 3748 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
NPIPA1Q9UND3 AC110373.1-201ENST00000505994 3505 ntBASIC5.61□□□□□ -1.51
NPIPA1Q9UND3 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC5.61□□□□□ -1.51
NPIPA1Q9UND3 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
NPIPA1Q9UND3 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
NPIPA1Q9UND3 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC5.6□□□□□ -1.51
NPIPA1Q9UND3 NLN-202ENST00000502464 8354 ntTSL 5 BASIC5.6□□□□□ -1.51
NPIPA1Q9UND3 AL117378.2-201ENST00000622916 1337 ntBASIC5.6□□□□□ -1.51
NPIPA1Q9UND3 AC092692.1-201ENST00000623625 2595 ntBASIC5.6□□□□□ -1.51
NPIPA1Q9UND3 AC090616.2-201ENST00000358484 431 ntTSL 3 BASIC5.6□□□□□ -1.51
NPIPA1Q9UND3 RN7SKP69-201ENST00000365390 305 ntBASIC5.6□□□□□ -1.51
NPIPA1Q9UND3 AL031985.1-201ENST00000392713 418 ntBASIC5.6□□□□□ -1.51
NPIPA1Q9UND3 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC5.6□□□□□ -1.51
NPIPA1Q9UND3 RPL35AP31-201ENST00000418340 337 ntBASIC5.6□□□□□ -1.51
NPIPA1Q9UND3 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC5.6□□□□□ -1.51
NPIPA1Q9UND3 AC016908.1-201ENST00000442571 1219 ntBASIC5.6□□□□□ -1.51
NPIPA1Q9UND3 CFL1P4-201ENST00000451536 498 ntBASIC5.6□□□□□ -1.51
NPIPA1Q9UND3 AL022319.1-201ENST00000458183 1167 ntBASIC5.6□□□□□ -1.51
NPIPA1Q9UND3 OR2A1-AS1-202ENST00000467944 422 ntBASIC5.6□□□□□ -1.51
NPIPA1Q9UND3 AC114781.3-201ENST00000512083 142 ntBASIC5.6□□□□□ -1.51
NPIPA1Q9UND3 RNA5SP434-201ENST00000516647 121 ntBASIC5.6□□□□□ -1.51
NPIPA1Q9UND3 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC5.6□□□□□ -1.51
NPIPA1Q9UND3 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC5.6□□□□□ -1.51
NPIPA1Q9UND3 SUMO2P19-201ENST00000518920 295 ntBASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms