Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
CLIP2Q9UDT6 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC7.13□□□□□ -1.27
CLIP2Q9UDT6 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
CLIP2Q9UDT6 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
CLIP2Q9UDT6 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
CLIP2Q9UDT6 AL359091.1-201ENST00000449048 1734 ntBASIC7.13□□□□□ -1.27
CLIP2Q9UDT6 AC091305.2-201ENST00000624049 1576 ntBASIC7.13□□□□□ -1.27
CLIP2Q9UDT6 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
CLIP2Q9UDT6 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC7.13□□□□□ -1.27
CLIP2Q9UDT6 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
CLIP2Q9UDT6 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC7.13□□□□□ -1.27
CLIP2Q9UDT6 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC7.13□□□□□ -1.27
CLIP2Q9UDT6 RNU105B-201ENST00000364478 208 ntBASIC7.13□□□□□ -1.27
CLIP2Q9UDT6 RPS3P2-201ENST00000421346 701 ntBASIC7.13□□□□□ -1.27
CLIP2Q9UDT6 AC007562.1-201ENST00000421819 517 ntBASIC7.13□□□□□ -1.27
CLIP2Q9UDT6 AC079922.1-201ENST00000443291 359 ntBASIC7.13□□□□□ -1.27
CLIP2Q9UDT6 AC023274.2-201ENST00000445264 521 ntBASIC7.13□□□□□ -1.27
CLIP2Q9UDT6 RN7SL193P-201ENST00000491708 276 ntBASIC7.13□□□□□ -1.27
CLIP2Q9UDT6 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC7.13□□□□□ -1.27
CLIP2Q9UDT6 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC7.13□□□□□ -1.27
CLIP2Q9UDT6 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC7.13□□□□□ -1.27
CLIP2Q9UDT6 AC005244.1-201ENST00000582566 339 ntBASIC7.13□□□□□ -1.27
CLIP2Q9UDT6 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC7.13□□□□□ -1.27
CLIP2Q9UDT6 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC7.13□□□□□ -1.27
CLIP2Q9UDT6 AL117336.3-201ENST00000603160 1107 ntTSL 3 BASIC7.13□□□□□ -1.27
CLIP2Q9UDT6 AC009237.12-201ENST00000604755 742 ntBASIC7.13□□□□□ -1.27
CLIP2Q9UDT6 AL021368.3-201ENST00000607119 578 ntBASIC7.13□□□□□ -1.27
CLIP2Q9UDT6 MIR6809-201ENST00000612189 116 ntBASIC7.13□□□□□ -1.27
CLIP2Q9UDT6 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC7.13□□□□□ -1.27
CLIP2Q9UDT6 AC003992.1-201ENST00000635364 557 ntBASIC7.13□□□□□ -1.27
CLIP2Q9UDT6 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC7.13□□□□□ -1.27
CLIP2Q9UDT6 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
CLIP2Q9UDT6 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
CLIP2Q9UDT6 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
CLIP2Q9UDT6 USP9YP3-201ENST00000434481 1766 ntBASIC7.13□□□□□ -1.27
CLIP2Q9UDT6 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
CLIP2Q9UDT6 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
CLIP2Q9UDT6 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
CLIP2Q9UDT6 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
CLIP2Q9UDT6 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
CLIP2Q9UDT6 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
CLIP2Q9UDT6 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
CLIP2Q9UDT6 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
CLIP2Q9UDT6 RN7SKP269-201ENST00000365545 319 ntBASIC7.12□□□□□ -1.27
CLIP2Q9UDT6 GNG5P2-201ENST00000372054 207 ntBASIC7.12□□□□□ -1.27
CLIP2Q9UDT6 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC7.12□□□□□ -1.27
CLIP2Q9UDT6 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC7.12□□□□□ -1.27
CLIP2Q9UDT6 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
CLIP2Q9UDT6 RPS15AP30-201ENST00000420976 390 ntBASIC7.12□□□□□ -1.27
CLIP2Q9UDT6 AC021876.1-201ENST00000425959 359 ntBASIC7.12□□□□□ -1.27
CLIP2Q9UDT6 CCNB1IP1P1-201ENST00000428976 839 ntBASIC7.12□□□□□ -1.27
CLIP2Q9UDT6 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC7.12□□□□□ -1.27
CLIP2Q9UDT6 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC7.12□□□□□ -1.27
CLIP2Q9UDT6 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC7.12□□□□□ -1.27
CLIP2Q9UDT6 AC114781.3-201ENST00000512083 142 ntBASIC7.12□□□□□ -1.27
CLIP2Q9UDT6 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC7.12□□□□□ -1.27
CLIP2Q9UDT6 RNA5SP271-201ENST00000516700 88 ntBASIC7.12□□□□□ -1.27
CLIP2Q9UDT6 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
CLIP2Q9UDT6 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC7.12□□□□□ -1.27
CLIP2Q9UDT6 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC7.12□□□□□ -1.27
CLIP2Q9UDT6 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC7.12□□□□□ -1.27
CLIP2Q9UDT6 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC7.12□□□□□ -1.27
CLIP2Q9UDT6 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC7.12□□□□□ -1.27
CLIP2Q9UDT6 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC7.12□□□□□ -1.27
CLIP2Q9UDT6 NLN-202ENST00000502464 8354 ntTSL 5 BASIC7.12□□□□□ -1.27
CLIP2Q9UDT6 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
CLIP2Q9UDT6 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC7.12□□□□□ -1.27
CLIP2Q9UDT6 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC7.12□□□□□ -1.27
CLIP2Q9UDT6 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
CLIP2Q9UDT6 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
CLIP2Q9UDT6 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC7.11□□□□□ -1.27
CLIP2Q9UDT6 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC7.11□□□□□ -1.27
CLIP2Q9UDT6 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC7.11□□□□□ -1.27
CLIP2Q9UDT6 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
CLIP2Q9UDT6 DMD-228ENST00000541735 7080 ntTSL 5 BASIC7.11□□□□□ -1.27
CLIP2Q9UDT6 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
CLIP2Q9UDT6 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
CLIP2Q9UDT6 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
CLIP2Q9UDT6 AC023490.2-201ENST00000359859 470 ntBASIC7.11□□□□□ -1.27
CLIP2Q9UDT6 OR2L2-201ENST00000366479 1134 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
CLIP2Q9UDT6 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
CLIP2Q9UDT6 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
CLIP2Q9UDT6 AL121835.1-201ENST00000404250 354 ntBASIC7.11□□□□□ -1.27
CLIP2Q9UDT6 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
CLIP2Q9UDT6 AL354890.1-201ENST00000413730 346 ntBASIC7.11□□□□□ -1.27
CLIP2Q9UDT6 GAS5-202ENST00000414075 413 ntTSL 2 BASIC7.11□□□□□ -1.27
CLIP2Q9UDT6 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC7.11□□□□□ -1.27
CLIP2Q9UDT6 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC7.11□□□□□ -1.27
CLIP2Q9UDT6 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC7.11□□□□□ -1.27
CLIP2Q9UDT6 NDUFS5P5-201ENST00000437256 321 ntBASIC7.11□□□□□ -1.27
CLIP2Q9UDT6 AL445466.1-201ENST00000448432 357 ntBASIC7.11□□□□□ -1.27
CLIP2Q9UDT6 ACA64.1-201ENST00000459171 127 ntBASIC7.11□□□□□ -1.27
CLIP2Q9UDT6 AC092865.4-201ENST00000477936 615 ntBASIC7.11□□□□□ -1.27
CLIP2Q9UDT6 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC7.11□□□□□ -1.27
CLIP2Q9UDT6 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC7.11□□□□□ -1.27
CLIP2Q9UDT6 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC7.11□□□□□ -1.27
CLIP2Q9UDT6 IGKV2-4-201ENST00000523070 340 ntBASIC7.11□□□□□ -1.27
CLIP2Q9UDT6 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC7.11□□□□□ -1.27
CLIP2Q9UDT6 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC7.11□□□□□ -1.27
CLIP2Q9UDT6 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC7.11□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms