Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
VPS29Q9UBQ0 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.51
VPS29Q9UBQ0 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC5.65□□□□□ -1.51
VPS29Q9UBQ0 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
VPS29Q9UBQ0 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
VPS29Q9UBQ0 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
VPS29Q9UBQ0 AL158152.1-201ENST00000602652 1435 ntBASIC5.65□□□□□ -1.51
VPS29Q9UBQ0 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
VPS29Q9UBQ0 MSL3P1-202ENST00000440028 1468 ntBASIC5.64□□□□□ -1.51
VPS29Q9UBQ0 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
VPS29Q9UBQ0 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
VPS29Q9UBQ0 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.64□□□□□ -1.51
VPS29Q9UBQ0 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC5.64□□□□□ -1.51
VPS29Q9UBQ0 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
VPS29Q9UBQ0 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
VPS29Q9UBQ0 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
VPS29Q9UBQ0 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
VPS29Q9UBQ0 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
VPS29Q9UBQ0 OR2L2-201ENST00000366479 1134 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
VPS29Q9UBQ0 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC5.64□□□□□ -1.51
VPS29Q9UBQ0 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
VPS29Q9UBQ0 RPL11P3-201ENST00000395256 523 ntBASIC5.64□□□□□ -1.51
VPS29Q9UBQ0 OR2W4P-201ENST00000406496 926 ntBASIC5.64□□□□□ -1.51
VPS29Q9UBQ0 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC5.64□□□□□ -1.51
VPS29Q9UBQ0 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC5.64□□□□□ -1.51
VPS29Q9UBQ0 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC5.64□□□□□ -1.51
VPS29Q9UBQ0 CRIP1P1-201ENST00000427567 185 ntBASIC5.64□□□□□ -1.51
VPS29Q9UBQ0 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC5.64□□□□□ -1.51
VPS29Q9UBQ0 RPS12P17-201ENST00000438591 377 ntBASIC5.64□□□□□ -1.51
VPS29Q9UBQ0 RPL6P30-201ENST00000443382 862 ntBASIC5.64□□□□□ -1.51
VPS29Q9UBQ0 BMS1P10-201ENST00000443754 1120 ntBASIC5.64□□□□□ -1.51
VPS29Q9UBQ0 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
VPS29Q9UBQ0 AC009879.1-201ENST00000520029 839 ntBASIC5.64□□□□□ -1.51
VPS29Q9UBQ0 GARSP1-201ENST00000570895 719 ntBASIC5.64□□□□□ -1.51
VPS29Q9UBQ0 TXNP4-201ENST00000575018 310 ntBASIC5.64□□□□□ -1.51
VPS29Q9UBQ0 AC138207.8-204ENST00000579588 527 ntBASIC5.64□□□□□ -1.51
VPS29Q9UBQ0 AP005119.1-201ENST00000580956 292 ntBASIC5.64□□□□□ -1.51
VPS29Q9UBQ0 AC005899.5-201ENST00000584721 552 ntTSL 5 BASIC5.64□□□□□ -1.51
VPS29Q9UBQ0 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC5.64□□□□□ -1.51
VPS29Q9UBQ0 AC060780.2-201ENST00000589047 198 ntBASIC5.64□□□□□ -1.51
VPS29Q9UBQ0 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
VPS29Q9UBQ0 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC5.64□□□□□ -1.51
VPS29Q9UBQ0 AC124916.2-201ENST00000604416 224 ntBASIC5.64□□□□□ -1.51
VPS29Q9UBQ0 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC5.64□□□□□ -1.51
VPS29Q9UBQ0 AC004801.6-201ENST00000616571 978 ntBASIC5.64□□□□□ -1.51
VPS29Q9UBQ0 AC096708.4-201ENST00000620563 552 ntBASIC5.64□□□□□ -1.51
VPS29Q9UBQ0 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC5.64□□□□□ -1.51
VPS29Q9UBQ0 TEX41-293ENST00000630451 690 ntTSL 5 BASIC5.64□□□□□ -1.51
VPS29Q9UBQ0 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
VPS29Q9UBQ0 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
VPS29Q9UBQ0 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC5.64□□□□□ -1.51
VPS29Q9UBQ0 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
VPS29Q9UBQ0 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.64□□□□□ -1.51
VPS29Q9UBQ0 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
VPS29Q9UBQ0 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
VPS29Q9UBQ0 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
VPS29Q9UBQ0 PSG10P-201ENST00000501199 1500 ntBASIC5.64□□□□□ -1.51
VPS29Q9UBQ0 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.63□□□□□ -1.51
VPS29Q9UBQ0 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
VPS29Q9UBQ0 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC5.63□□□□□ -1.51
VPS29Q9UBQ0 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
VPS29Q9UBQ0 BX284613.1-201ENST00000452221 1641 ntBASIC5.63□□□□□ -1.51
VPS29Q9UBQ0 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
VPS29Q9UBQ0 NCOA4P2-201ENST00000340589 1813 ntBASIC5.63□□□□□ -1.51
VPS29Q9UBQ0 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.63□□□□□ -1.51
VPS29Q9UBQ0 RN7SKP77-201ENST00000363261 353 ntBASIC5.63□□□□□ -1.51
VPS29Q9UBQ0 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
VPS29Q9UBQ0 SNORA51.9-201ENST00000384295 124 ntBASIC5.63□□□□□ -1.51
VPS29Q9UBQ0 METTL15P3-201ENST00000415522 1221 ntBASIC5.63□□□□□ -1.51
VPS29Q9UBQ0 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC5.63□□□□□ -1.51
VPS29Q9UBQ0 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC5.63□□□□□ -1.51
VPS29Q9UBQ0 KIF4CP-201ENST00000422742 1279 ntBASIC5.63□□□□□ -1.51
VPS29Q9UBQ0 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
VPS29Q9UBQ0 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
VPS29Q9UBQ0 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC5.63□□□□□ -1.51
VPS29Q9UBQ0 AC023141.8-201ENST00000442554 208 ntBASIC5.63□□□□□ -1.51
VPS29Q9UBQ0 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC5.63□□□□□ -1.51
VPS29Q9UBQ0 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
VPS29Q9UBQ0 RBMY2AP-201ENST00000445405 1157 ntBASIC5.63□□□□□ -1.51
VPS29Q9UBQ0 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC5.63□□□□□ -1.51
VPS29Q9UBQ0 RBMY2CP-201ENST00000448575 1157 ntBASIC5.63□□□□□ -1.51
VPS29Q9UBQ0 RBMY2DP-202ENST00000448881 1157 ntBASIC5.63□□□□□ -1.51
VPS29Q9UBQ0 AC005077.1-201ENST00000449226 375 ntBASIC5.63□□□□□ -1.51
VPS29Q9UBQ0 RBMY2BP-202ENST00000451071 1156 ntBASIC5.63□□□□□ -1.51
VPS29Q9UBQ0 AC006539.1-201ENST00000481419 501 ntBASIC5.63□□□□□ -1.51
VPS29Q9UBQ0 PPP1R11P1-201ENST00000486095 376 ntBASIC5.63□□□□□ -1.51
VPS29Q9UBQ0 PDCL3P4-201ENST00000489621 720 ntBASIC5.63□□□□□ -1.51
VPS29Q9UBQ0 AC018797.1-201ENST00000510791 255 ntBASIC5.63□□□□□ -1.51
VPS29Q9UBQ0 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
VPS29Q9UBQ0 LDHC-205ENST00000537486 583 ntTSL 5 BASIC5.63□□□□□ -1.51
VPS29Q9UBQ0 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC5.63□□□□□ -1.51
VPS29Q9UBQ0 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC5.63□□□□□ -1.51
VPS29Q9UBQ0 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC5.63□□□□□ -1.51
VPS29Q9UBQ0 AC084782.2-201ENST00000561934 839 ntTSL 3 BASIC5.63□□□□□ -1.51
VPS29Q9UBQ0 OR1E3-201ENST00000575608 948 ntBASIC5.63□□□□□ -1.51
VPS29Q9UBQ0 MIR4502-201ENST00000580432 81 ntBASIC5.63□□□□□ -1.51
VPS29Q9UBQ0 AC005244.1-201ENST00000582566 339 ntBASIC5.63□□□□□ -1.51
VPS29Q9UBQ0 AL513327.3-201ENST00000602618 469 ntBASIC5.63□□□□□ -1.51
VPS29Q9UBQ0 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC5.63□□□□□ -1.51
VPS29Q9UBQ0 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 146.5 ms