Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 RACGAP1-216ENST00000548961 387 ntTSL 3 BASIC6.95□□□□□ -1.3
PPARGC1AQ9UBK2 FLVCR2-204ENST00000553587 584 ntTSL 2 BASIC6.95□□□□□ -1.3
PPARGC1AQ9UBK2 AC087286.3-201ENST00000561409 953 ntTSL 3 BASIC6.95□□□□□ -1.3
PPARGC1AQ9UBK2 AC004232.1-201ENST00000571388 208 ntBASIC6.95□□□□□ -1.3
PPARGC1AQ9UBK2 RPS11-205ENST00000599561 430 ntTSL 5 BASIC6.95□□□□□ -1.3
PPARGC1AQ9UBK2 HNRNPA3P9-201ENST00000604913 979 ntBASIC6.95□□□□□ -1.3
PPARGC1AQ9UBK2 AC022001.1-201ENST00000605193 268 ntBASIC6.95□□□□□ -1.3
PPARGC1AQ9UBK2 OR1N1-202ENST00000619659 939 ntBASIC6.95□□□□□ -1.3
PPARGC1AQ9UBK2 AC061999.1-201ENST00000624454 177 ntBASIC6.95□□□□□ -1.3
PPARGC1AQ9UBK2 SAMD12-AS1-201ENST00000625758 718 ntTSL 5 BASIC6.95□□□□□ -1.3
PPARGC1AQ9UBK2 AL354702.2-202ENST00000641481 890 ntBASIC6.95□□□□□ -1.3
PPARGC1AQ9UBK2 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
PPARGC1AQ9UBK2 GTF2H3-201ENST00000228955 1472 ntTSL 2 BASIC6.95□□□□□ -1.3
PPARGC1AQ9UBK2 GJA10-203ENST00000638915 1479 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
PPARGC1AQ9UBK2 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
PPARGC1AQ9UBK2 MAK-205ENST00000538030 2459 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
PPARGC1AQ9UBK2 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
PPARGC1AQ9UBK2 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
PPARGC1AQ9UBK2 ZNF101P1-201ENST00000435701 1720 ntBASIC6.95□□□□□ -1.3
PPARGC1AQ9UBK2 ZEB2-AS1-202ENST00000427278 1322 ntTSL 5 BASIC6.95□□□□□ -1.3
PPARGC1AQ9UBK2 ANKRD31-201ENST00000274361 6036 ntAPPRIS P2 TSL 5 BASIC6.95□□□□□ -1.3
PPARGC1AQ9UBK2 NPIPB13-201ENST00000520915 3584 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
PPARGC1AQ9UBK2 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC6.95□□□□□ -1.3
PPARGC1AQ9UBK2 AL022323.4-201ENST00000623980 13120 ntBASIC6.95□□□□□ -1.3
PPARGC1AQ9UBK2 NLRP4-203ENST00000587891 3201 ntTSL 2 BASIC6.95□□□□□ -1.3
PPARGC1AQ9UBK2 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
PPARGC1AQ9UBK2 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC6.95□□□□□ -1.3
PPARGC1AQ9UBK2 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC6.94□□□□□ -1.3
PPARGC1AQ9UBK2 TRMT10A-202ENST00000394876 1638 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
PPARGC1AQ9UBK2 ZHX3-205ENST00000432768 3551 ntAPPRIS P1 TSL 2 BASIC6.94□□□□□ -1.3
PPARGC1AQ9UBK2 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
PPARGC1AQ9UBK2 PAPOLG-201ENST00000238714 4263 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
PPARGC1AQ9UBK2 IL5RA-209ENST00000446632 2514 ntAPPRIS P4 TSL 5 BASIC6.94□□□□□ -1.3
PPARGC1AQ9UBK2 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC6.94□□□□□ -1.3
PPARGC1AQ9UBK2 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
PPARGC1AQ9UBK2 LINC01505-203ENST00000435485 1686 ntTSL 5 BASIC6.94□□□□□ -1.3
PPARGC1AQ9UBK2 VIRMA-202ENST00000421249 3924 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
PPARGC1AQ9UBK2 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC6.94□□□□□ -1.3
PPARGC1AQ9UBK2 ZNF268-209ENST00000541009 3773 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
PPARGC1AQ9UBK2 RASGRF1-201ENST00000394745 2850 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
PPARGC1AQ9UBK2 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC6.94□□□□□ -1.3
PPARGC1AQ9UBK2 MS4A12-201ENST00000016913 1167 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
PPARGC1AQ9UBK2 OR1I1-201ENST00000209540 1242 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
PPARGC1AQ9UBK2 IFNK-201ENST00000276943 1140 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
PPARGC1AQ9UBK2 SAMD13-203ENST00000370670 565 ntAPPRIS P1 TSL 4 BASIC6.94□□□□□ -1.3
PPARGC1AQ9UBK2 PAGE2-201ENST00000374965 456 ntTSL 2 BASIC6.94□□□□□ -1.3
PPARGC1AQ9UBK2 SNORD116-8-201ENST00000384365 95 ntBASIC6.94□□□□□ -1.3
PPARGC1AQ9UBK2 AP002784.2-201ENST00000397300 549 ntBASIC6.94□□□□□ -1.3
PPARGC1AQ9UBK2 HMGB1P13-201ENST00000406019 642 ntBASIC6.94□□□□□ -1.3
PPARGC1AQ9UBK2 AL353133.1-201ENST00000407695 401 ntBASIC6.94□□□□□ -1.3
PPARGC1AQ9UBK2 LINC00354-201ENST00000412119 347 ntTSL 5 BASIC6.94□□□□□ -1.3
PPARGC1AQ9UBK2 AC096537.2-201ENST00000413707 714 ntBASIC6.94□□□□□ -1.3
PPARGC1AQ9UBK2 AL355581.1-201ENST00000415964 830 ntTSL 2 BASIC6.94□□□□□ -1.3
PPARGC1AQ9UBK2 AP003385.1-201ENST00000426387 893 ntBASIC6.94□□□□□ -1.3
PPARGC1AQ9UBK2 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
PPARGC1AQ9UBK2 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC6.94□□□□□ -1.3
PPARGC1AQ9UBK2 AL158212.1-201ENST00000428766 315 ntTSL 5 BASIC6.94□□□□□ -1.3
PPARGC1AQ9UBK2 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC6.94□□□□□ -1.3
PPARGC1AQ9UBK2 DSCAM-IT1-201ENST00000440363 720 ntTSL 3 BASIC6.94□□□□□ -1.3
PPARGC1AQ9UBK2 RPL6P30-201ENST00000443382 862 ntBASIC6.94□□□□□ -1.3
PPARGC1AQ9UBK2 SNRPBP1-201ENST00000443634 282 ntBASIC6.94□□□□□ -1.3
PPARGC1AQ9UBK2 PFN1P11-201ENST00000445829 389 ntBASIC6.94□□□□□ -1.3
PPARGC1AQ9UBK2 AL627224.1-201ENST00000448334 444 ntBASIC6.94□□□□□ -1.3
PPARGC1AQ9UBK2 C1orf105-204ENST00000460397 462 ntTSL 3 BASIC6.94□□□□□ -1.3
PPARGC1AQ9UBK2 RPL7AP23-201ENST00000482625 776 ntBASIC6.94□□□□□ -1.3
PPARGC1AQ9UBK2 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC6.94□□□□□ -1.3
PPARGC1AQ9UBK2 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC6.94□□□□□ -1.3
PPARGC1AQ9UBK2 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC6.94□□□□□ -1.3
PPARGC1AQ9UBK2 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC6.94□□□□□ -1.3
PPARGC1AQ9UBK2 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC6.94□□□□□ -1.3
PPARGC1AQ9UBK2 AC091849.1-201ENST00000509920 121 ntBASIC6.94□□□□□ -1.3
PPARGC1AQ9UBK2 Y_RNA.688-201ENST00000516565 95 ntBASIC6.94□□□□□ -1.3
PPARGC1AQ9UBK2 AC022509.1-203ENST00000541940 708 ntTSL 4 BASIC6.94□□□□□ -1.3
PPARGC1AQ9UBK2 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC6.94□□□□□ -1.3
PPARGC1AQ9UBK2 AL445383.1-201ENST00000554689 874 ntBASIC6.94□□□□□ -1.3
PPARGC1AQ9UBK2 ANP32BP1-202ENST00000568553 737 ntBASIC6.94□□□□□ -1.3
PPARGC1AQ9UBK2 AC106785.4-201ENST00000569492 412 ntBASIC6.94□□□□□ -1.3
PPARGC1AQ9UBK2 Z98949.1-210ENST00000597548 766 ntTSL 5 BASIC6.94□□□□□ -1.3
PPARGC1AQ9UBK2 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC6.94□□□□□ -1.3
PPARGC1AQ9UBK2 AC021171.1-201ENST00000603137 706 ntBASIC6.94□□□□□ -1.3
PPARGC1AQ9UBK2 IGKV2OR2-7D-201ENST00000603664 304 ntBASIC6.94□□□□□ -1.3
PPARGC1AQ9UBK2 IGKV2OR2-7-201ENST00000604652 304 ntBASIC6.94□□□□□ -1.3
PPARGC1AQ9UBK2 AL513478.2-201ENST00000610400 988 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
PPARGC1AQ9UBK2 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC6.94□□□□□ -1.3
PPARGC1AQ9UBK2 AC091304.6-201ENST00000619761 202 ntBASIC6.94□□□□□ -1.3
PPARGC1AQ9UBK2 AC244517.6-202ENST00000623884 566 ntAPPRIS P1 TSL 4 BASIC6.94□□□□□ -1.3
PPARGC1AQ9UBK2 AP000577.1-201ENST00000624366 878 ntBASIC6.94□□□□□ -1.3
PPARGC1AQ9UBK2 MBD5-221ENST00000637159 902 ntTSL 5 BASIC6.94□□□□□ -1.3
PPARGC1AQ9UBK2 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC6.94□□□□□ -1.3
PPARGC1AQ9UBK2 AC018717.1-201ENST00000457712 1505 ntBASIC6.94□□□□□ -1.3
PPARGC1AQ9UBK2 CUBNP3-201ENST00000457461 1784 ntBASIC6.94□□□□□ -1.3
PPARGC1AQ9UBK2 PRLR-216ENST00000542609 1764 ntTSL 5 BASIC6.94□□□□□ -1.3
PPARGC1AQ9UBK2 SLC25A12-202ENST00000422440 2979 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
PPARGC1AQ9UBK2 MAP3K7CL-209ENST00000399947 2003 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
PPARGC1AQ9UBK2 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC6.94□□□□□ -1.3
PPARGC1AQ9UBK2 NUMB-203ENST00000359560 3309 ntAPPRIS P3 TSL 5 BASIC6.94□□□□□ -1.3
PPARGC1AQ9UBK2 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
PPARGC1AQ9UBK2 DAZ1-201ENST00000382510 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
PPARGC1AQ9UBK2 AC007878.1-201ENST00000434786 1615 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
PPARGC1AQ9UBK2 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms