Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC5.9□□□□□ -1.46
PTCHD4Q6ZW05 AC018946.1-201ENST00000560578 458 ntTSL 5 BASIC5.9□□□□□ -1.46
PTCHD4Q6ZW05 AC106730.2-201ENST00000566641 540 ntBASIC5.9□□□□□ -1.46
PTCHD4Q6ZW05 AC005208.1-202ENST00000587325 725 ntTSL 3 BASIC5.9□□□□□ -1.46
PTCHD4Q6ZW05 MIR7515HG-250ENST00000592565 856 ntTSL 5 BASIC5.9□□□□□ -1.46
PTCHD4Q6ZW05 AC024085.1-201ENST00000604299 432 ntBASIC5.9□□□□□ -1.46
PTCHD4Q6ZW05 AP001033.2-201ENST00000609701 1003 ntBASIC5.9□□□□□ -1.46
PTCHD4Q6ZW05 AC116165.3-201ENST00000614524 400 ntBASIC5.9□□□□□ -1.46
PTCHD4Q6ZW05 AC068787.1-201ENST00000623908 691 ntBASIC5.9□□□□□ -1.46
PTCHD4Q6ZW05 AC005858.3-201ENST00000624756 589 ntBASIC5.9□□□□□ -1.46
PTCHD4Q6ZW05 AC013437.2-201ENST00000639587 677 ntBASIC5.9□□□□□ -1.46
PTCHD4Q6ZW05 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
PTCHD4Q6ZW05 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
PTCHD4Q6ZW05 CCNT2P1-201ENST00000423082 1315 ntBASIC5.9□□□□□ -1.47
PTCHD4Q6ZW05 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
PTCHD4Q6ZW05 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
PTCHD4Q6ZW05 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
PTCHD4Q6ZW05 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC5.9□□□□□ -1.47
PTCHD4Q6ZW05 AC005725.1-201ENST00000577346 2607 ntBASIC5.9□□□□□ -1.47
PTCHD4Q6ZW05 AC092111.2-201ENST00000611627 1414 ntBASIC5.9□□□□□ -1.47
PTCHD4Q6ZW05 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC5.9□□□□□ -1.47
PTCHD4Q6ZW05 CDC27P2-201ENST00000425026 1922 ntBASIC5.89□□□□□ -1.47
PTCHD4Q6ZW05 BIN2P1-201ENST00000504996 1530 ntBASIC5.89□□□□□ -1.47
PTCHD4Q6ZW05 AC017002.4-201ENST00000604721 1525 ntBASIC5.89□□□□□ -1.47
PTCHD4Q6ZW05 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC5.89□□□□□ -1.47
PTCHD4Q6ZW05 AL591135.1-201ENST00000401578 5914 ntBASIC5.89□□□□□ -1.47
PTCHD4Q6ZW05 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
PTCHD4Q6ZW05 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
PTCHD4Q6ZW05 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
PTCHD4Q6ZW05 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
PTCHD4Q6ZW05 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC5.89□□□□□ -1.47
PTCHD4Q6ZW05 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
PTCHD4Q6ZW05 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC5.89□□□□□ -1.47
PTCHD4Q6ZW05 AL080312.1-201ENST00000256654 824 ntBASIC5.89□□□□□ -1.47
PTCHD4Q6ZW05 RNA5SP478-201ENST00000364657 115 ntBASIC5.89□□□□□ -1.47
PTCHD4Q6ZW05 RN7SKP130-201ENST00000364924 301 ntBASIC5.89□□□□□ -1.47
PTCHD4Q6ZW05 RNA5SP152-201ENST00000365184 110 ntBASIC5.89□□□□□ -1.47
PTCHD4Q6ZW05 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC5.89□□□□□ -1.47
PTCHD4Q6ZW05 AL590635.1-201ENST00000406314 586 ntBASIC5.89□□□□□ -1.47
PTCHD4Q6ZW05 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC5.89□□□□□ -1.47
PTCHD4Q6ZW05 MTCO2P8-201ENST00000412213 658 ntBASIC5.89□□□□□ -1.47
PTCHD4Q6ZW05 RPL18AP14-201ENST00000417685 526 ntBASIC5.89□□□□□ -1.47
PTCHD4Q6ZW05 MTCO2P23-201ENST00000425216 680 ntBASIC5.89□□□□□ -1.47
PTCHD4Q6ZW05 AC116038.1-201ENST00000432250 408 ntTSL 3 BASIC5.89□□□□□ -1.47
PTCHD4Q6ZW05 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC5.89□□□□□ -1.47
PTCHD4Q6ZW05 AC003989.1-201ENST00000434569 565 ntBASIC5.89□□□□□ -1.47
PTCHD4Q6ZW05 TPTE2P3-201ENST00000441562 1189 ntBASIC5.89□□□□□ -1.47
PTCHD4Q6ZW05 LINC01832-201ENST00000446520 553 ntTSL 4 BASIC5.89□□□□□ -1.47
PTCHD4Q6ZW05 AL929410.2-201ENST00000451170 189 ntBASIC5.89□□□□□ -1.47
PTCHD4Q6ZW05 AC103563.5-201ENST00000455643 364 ntBASIC5.89□□□□□ -1.47
PTCHD4Q6ZW05 AC236972.4-201ENST00000458091 963 ntBASIC5.89□□□□□ -1.47
PTCHD4Q6ZW05 RPL32P14-201ENST00000463196 378 ntBASIC5.89□□□□□ -1.47
PTCHD4Q6ZW05 RPS10P28-201ENST00000480396 498 ntBASIC5.89□□□□□ -1.47
PTCHD4Q6ZW05 RPS3AP6-201ENST00000484430 795 ntBASIC5.89□□□□□ -1.47
PTCHD4Q6ZW05 SMR3B-202ENST00000504825 489 ntAPPRIS P1 TSL 3 BASIC5.89□□□□□ -1.47
PTCHD4Q6ZW05 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC5.89□□□□□ -1.47
PTCHD4Q6ZW05 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC5.89□□□□□ -1.47
PTCHD4Q6ZW05 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC5.89□□□□□ -1.47
PTCHD4Q6ZW05 AC103681.2-201ENST00000527450 567 ntTSL 4 BASIC5.89□□□□□ -1.47
PTCHD4Q6ZW05 WBP2NL-210ENST00000543212 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
PTCHD4Q6ZW05 ASXL1-208ENST00000555343 1034 ntTSL 5 BASIC5.89□□□□□ -1.47
PTCHD4Q6ZW05 NPM1P5-201ENST00000557228 838 ntBASIC5.89□□□□□ -1.47
PTCHD4Q6ZW05 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
PTCHD4Q6ZW05 OR4H6P-201ENST00000563771 921 ntBASIC5.89□□□□□ -1.47
PTCHD4Q6ZW05 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC5.89□□□□□ -1.47
PTCHD4Q6ZW05 AC023813.1-201ENST00000565055 306 ntTSL 5 BASIC5.89□□□□□ -1.47
PTCHD4Q6ZW05 AC126323.4-201ENST00000566935 234 ntBASIC5.89□□□□□ -1.47
PTCHD4Q6ZW05 MDFIC2-201ENST00000567252 778 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
PTCHD4Q6ZW05 RN7SL131P-201ENST00000579043 256 ntBASIC5.89□□□□□ -1.47
PTCHD4Q6ZW05 AC135178.4-201ENST00000585275 548 ntTSL 2 BASIC5.89□□□□□ -1.47
PTCHD4Q6ZW05 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC5.89□□□□□ -1.47
PTCHD4Q6ZW05 TP53TG1_2.1-201ENST00000611226 182 ntBASIC5.89□□□□□ -1.47
PTCHD4Q6ZW05 AC009283.1-201ENST00000615852 645 ntBASIC5.89□□□□□ -1.47
PTCHD4Q6ZW05 AC140725.3-201ENST00000616193 880 ntBASIC5.89□□□□□ -1.47
PTCHD4Q6ZW05 MIR6829-201ENST00000620375 67 ntBASIC5.89□□□□□ -1.47
PTCHD4Q6ZW05 AC021422.1-201ENST00000621212 473 ntBASIC5.89□□□□□ -1.47
PTCHD4Q6ZW05 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
PTCHD4Q6ZW05 AL356863.1-201ENST00000623378 1080 ntBASIC5.89□□□□□ -1.47
PTCHD4Q6ZW05 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC5.89□□□□□ -1.47
PTCHD4Q6ZW05 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC5.89□□□□□ -1.47
PTCHD4Q6ZW05 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC5.89□□□□□ -1.47
PTCHD4Q6ZW05 AC135068.11-201ENST00000636378 921 ntBASIC5.89□□□□□ -1.47
PTCHD4Q6ZW05 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC5.89□□□□□ -1.47
PTCHD4Q6ZW05 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
PTCHD4Q6ZW05 EEF1A1P30-201ENST00000429708 1315 ntBASIC5.89□□□□□ -1.47
PTCHD4Q6ZW05 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC5.89□□□□□ -1.47
PTCHD4Q6ZW05 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
PTCHD4Q6ZW05 CIR1-201ENST00000342016 1921 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
PTCHD4Q6ZW05 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
PTCHD4Q6ZW05 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
PTCHD4Q6ZW05 PTPRD-AS1-201ENST00000430766 1959 ntTSL 2 BASIC5.89□□□□□ -1.47
PTCHD4Q6ZW05 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
PTCHD4Q6ZW05 TCP1P3-201ENST00000414406 1498 ntBASIC5.89□□□□□ -1.47
PTCHD4Q6ZW05 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC5.89□□□□□ -1.47
PTCHD4Q6ZW05 ZNF763-202ENST00000358987 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
PTCHD4Q6ZW05 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
PTCHD4Q6ZW05 AC095038.1-201ENST00000429248 1591 ntBASIC5.89□□□□□ -1.47
PTCHD4Q6ZW05 GLYATL1P1-201ENST00000528297 1607 ntBASIC5.88□□□□□ -1.47
PTCHD4Q6ZW05 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC5.88□□□□□ -1.47
PTCHD4Q6ZW05 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms