Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 AC011601.1-201ENST00000549710 577 ntTSL 3 BASIC5.99□□□□□ -1.45
ZNF549Q6P9A3 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
ZNF549Q6P9A3 AL049779.3-201ENST00000557141 606 ntBASIC5.99□□□□□ -1.45
ZNF549Q6P9A3 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC5.99□□□□□ -1.45
ZNF549Q6P9A3 MRPS21P8-201ENST00000569196 235 ntBASIC5.99□□□□□ -1.45
ZNF549Q6P9A3 MTND4LP25-201ENST00000570218 163 ntBASIC5.99□□□□□ -1.45
ZNF549Q6P9A3 AL078601.3-201ENST00000573303 535 ntBASIC5.99□□□□□ -1.45
ZNF549Q6P9A3 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
ZNF549Q6P9A3 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC5.99□□□□□ -1.45
ZNF549Q6P9A3 AC010615.3-201ENST00000597319 394 ntBASIC5.99□□□□□ -1.45
ZNF549Q6P9A3 AC011500.1-201ENST00000601963 469 ntBASIC5.99□□□□□ -1.45
ZNF549Q6P9A3 KATNBL1P1-201ENST00000605192 748 ntBASIC5.99□□□□□ -1.45
ZNF549Q6P9A3 AC110792.4-201ENST00000609843 298 ntBASIC5.99□□□□□ -1.45
ZNF549Q6P9A3 OSTC-205ENST00000613215 876 ntTSL 2 BASIC5.99□□□□□ -1.45
ZNF549Q6P9A3 AC021422.1-201ENST00000621212 473 ntBASIC5.99□□□□□ -1.45
ZNF549Q6P9A3 AC021766.1-201ENST00000624404 741 ntBASIC5.99□□□□□ -1.45
ZNF549Q6P9A3 AL357562.1-201ENST00000624911 609 ntBASIC5.99□□□□□ -1.45
ZNF549Q6P9A3 AC073488.6-201ENST00000632293 754 ntBASIC5.99□□□□□ -1.45
ZNF549Q6P9A3 ZNF658B-201ENST00000602828 3408 ntBASIC5.99□□□□□ -1.45
ZNF549Q6P9A3 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC5.99□□□□□ -1.45
ZNF549Q6P9A3 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC5.99□□□□□ -1.45
ZNF549Q6P9A3 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
ZNF549Q6P9A3 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
ZNF549Q6P9A3 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC5.99□□□□□ -1.45
ZNF549Q6P9A3 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
ZNF549Q6P9A3 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC5.98□□□□□ -1.45
ZNF549Q6P9A3 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
ZNF549Q6P9A3 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
ZNF549Q6P9A3 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
ZNF549Q6P9A3 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
ZNF549Q6P9A3 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
ZNF549Q6P9A3 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC5.98□□□□□ -1.45
ZNF549Q6P9A3 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
ZNF549Q6P9A3 ABCA11P-202ENST00000504019 2110 ntBASIC5.98□□□□□ -1.45
ZNF549Q6P9A3 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
ZNF549Q6P9A3 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
ZNF549Q6P9A3 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC5.98□□□□□ -1.45
ZNF549Q6P9A3 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
ZNF549Q6P9A3 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
ZNF549Q6P9A3 RN7SKP250-201ENST00000363924 321 ntBASIC5.98□□□□□ -1.45
ZNF549Q6P9A3 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC5.98□□□□□ -1.45
ZNF549Q6P9A3 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC5.98□□□□□ -1.45
ZNF549Q6P9A3 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
ZNF549Q6P9A3 AL132875.1-201ENST00000403623 949 ntBASIC5.98□□□□□ -1.45
ZNF549Q6P9A3 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC5.98□□□□□ -1.45
ZNF549Q6P9A3 RPL35AP31-201ENST00000418340 337 ntBASIC5.98□□□□□ -1.45
ZNF549Q6P9A3 VN1R3-201ENST00000418822 919 ntBASIC5.98□□□□□ -1.45
ZNF549Q6P9A3 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC5.98□□□□□ -1.45
ZNF549Q6P9A3 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC5.98□□□□□ -1.45
ZNF549Q6P9A3 AC092651.1-201ENST00000426110 312 ntBASIC5.98□□□□□ -1.45
ZNF549Q6P9A3 RPSAP65-201ENST00000429660 595 ntBASIC5.98□□□□□ -1.45
ZNF549Q6P9A3 USP24P1-201ENST00000433802 779 ntBASIC5.98□□□□□ -1.45
ZNF549Q6P9A3 AC023141.3-201ENST00000436698 278 ntBASIC5.98□□□□□ -1.45
ZNF549Q6P9A3 AC092473.1-201ENST00000441098 221 ntBASIC5.98□□□□□ -1.45
ZNF549Q6P9A3 AC010240.2-201ENST00000445363 1205 ntBASIC5.98□□□□□ -1.45
ZNF549Q6P9A3 AC005017.1-201ENST00000482002 490 ntBASIC5.98□□□□□ -1.45
ZNF549Q6P9A3 RN7SL568P-201ENST00000493069 298 ntBASIC5.98□□□□□ -1.45
ZNF549Q6P9A3 AC147055.1-201ENST00000509261 750 ntBASIC5.98□□□□□ -1.45
ZNF549Q6P9A3 OR8K2P-201ENST00000524645 927 ntBASIC5.98□□□□□ -1.45
ZNF549Q6P9A3 AC084880.3-201ENST00000535921 541 ntTSL 4 BASIC5.98□□□□□ -1.45
ZNF549Q6P9A3 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC5.98□□□□□ -1.45
ZNF549Q6P9A3 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC5.98□□□□□ -1.45
ZNF549Q6P9A3 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC5.98□□□□□ -1.45
ZNF549Q6P9A3 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
ZNF549Q6P9A3 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC5.98□□□□□ -1.45
ZNF549Q6P9A3 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC5.98□□□□□ -1.45
ZNF549Q6P9A3 MKKS-203ENST00000609375 882 ntTSL 2 BASIC5.98□□□□□ -1.45
ZNF549Q6P9A3 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC5.98□□□□□ -1.45
ZNF549Q6P9A3 uc_338.26-201ENST00000612659 160 ntBASIC5.98□□□□□ -1.45
ZNF549Q6P9A3 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC5.98□□□□□ -1.45
ZNF549Q6P9A3 AL512652.1-201ENST00000619006 500 ntBASIC5.98□□□□□ -1.45
ZNF549Q6P9A3 AC109809.1-201ENST00000619665 545 ntBASIC5.98□□□□□ -1.45
ZNF549Q6P9A3 AL357153.4-201ENST00000620487 1016 ntBASIC5.98□□□□□ -1.45
ZNF549Q6P9A3 AC006927.4-201ENST00000639187 543 ntBASIC5.98□□□□□ -1.45
ZNF549Q6P9A3 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC5.98□□□□□ -1.45
ZNF549Q6P9A3 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
ZNF549Q6P9A3 LIPA-203ENST00000371837 2513 ntTSL 2 BASIC5.98□□□□□ -1.45
ZNF549Q6P9A3 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC5.98□□□□□ -1.45
ZNF549Q6P9A3 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
ZNF549Q6P9A3 ZNF969P-201ENST00000510345 2341 ntBASIC5.98□□□□□ -1.45
ZNF549Q6P9A3 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC5.98□□□□□ -1.45
ZNF549Q6P9A3 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC5.98□□□□□ -1.45
ZNF549Q6P9A3 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
ZNF549Q6P9A3 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
ZNF549Q6P9A3 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC5.97□□□□□ -1.45
ZNF549Q6P9A3 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
ZNF549Q6P9A3 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
ZNF549Q6P9A3 RBMY1HP-201ENST00000382759 1389 ntBASIC5.97□□□□□ -1.45
ZNF549Q6P9A3 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
ZNF549Q6P9A3 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
ZNF549Q6P9A3 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC5.97□□□□□ -1.45
ZNF549Q6P9A3 AC027575.3-201ENST00000583058 2747 ntBASIC5.97□□□□□ -1.45
ZNF549Q6P9A3 RNA5SP279-201ENST00000365513 117 ntBASIC5.97□□□□□ -1.45
ZNF549Q6P9A3 AL121977.1-201ENST00000401636 979 ntBASIC5.97□□□□□ -1.45
ZNF549Q6P9A3 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC5.97□□□□□ -1.45
ZNF549Q6P9A3 AL049712.1-201ENST00000418739 872 ntTSL 3 BASIC5.97□□□□□ -1.45
ZNF549Q6P9A3 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC5.97□□□□□ -1.45
ZNF549Q6P9A3 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
ZNF549Q6P9A3 AC108479.1-201ENST00000431142 427 ntBASIC5.97□□□□□ -1.45
ZNF549Q6P9A3 UBE2V2P1-201ENST00000434717 398 ntBASIC5.97□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms