Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC6.98□□□□□ -1.29
SHROOM1Q2M3G4 AC127526.3-201ENST00000534291 450 ntTSL 3 BASIC6.98□□□□□ -1.29
SHROOM1Q2M3G4 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC6.98□□□□□ -1.29
SHROOM1Q2M3G4 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC6.98□□□□□ -1.29
SHROOM1Q2M3G4 DPPA2P4-201ENST00000563717 878 ntBASIC6.98□□□□□ -1.29
SHROOM1Q2M3G4 AC010547.6-201ENST00000571789 193 ntBASIC6.98□□□□□ -1.29
SHROOM1Q2M3G4 TXNP4-201ENST00000575018 310 ntBASIC6.98□□□□□ -1.29
SHROOM1Q2M3G4 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC6.98□□□□□ -1.29
SHROOM1Q2M3G4 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC6.98□□□□□ -1.29
SHROOM1Q2M3G4 FAM27E4-201ENST00000605259 342 ntBASIC6.98□□□□□ -1.29
SHROOM1Q2M3G4 CYP19A1-202ENST00000396404 2388 ntAPPRIS P1 TSL 2 BASIC6.98□□□□□ -1.29
SHROOM1Q2M3G4 ARHGAP32-201ENST00000310343 10111 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
SHROOM1Q2M3G4 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC6.98□□□□□ -1.29
SHROOM1Q2M3G4 XKRY2-202ENST00000623874 1581 ntBASIC6.98□□□□□ -1.29
SHROOM1Q2M3G4 XKRY-202ENST00000624960 1581 ntBASIC6.98□□□□□ -1.29
SHROOM1Q2M3G4 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC6.98□□□□□ -1.29
SHROOM1Q2M3G4 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC6.98□□□□□ -1.29
SHROOM1Q2M3G4 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
SHROOM1Q2M3G4 DPY19L1P1-201ENST00000417811 2594 ntBASIC6.98□□□□□ -1.29
SHROOM1Q2M3G4 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
SHROOM1Q2M3G4 MSR1-202ENST00000350896 3572 ntTSL 5 BASIC6.98□□□□□ -1.29
SHROOM1Q2M3G4 CNTRL-207ENST00000373855 7660 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
SHROOM1Q2M3G4 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
SHROOM1Q2M3G4 ERG-202ENST00000398897 4651 ntTSL 5 BASIC6.97□□□□□ -1.29
SHROOM1Q2M3G4 PDZK1P1-202ENST00000425209 1350 ntBASIC6.97□□□□□ -1.29
SHROOM1Q2M3G4 NR1H5P-201ENST00000452683 1377 ntBASIC6.97□□□□□ -1.29
SHROOM1Q2M3G4 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC6.97□□□□□ -1.29
SHROOM1Q2M3G4 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC6.97□□□□□ -1.29
SHROOM1Q2M3G4 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
SHROOM1Q2M3G4 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
SHROOM1Q2M3G4 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC6.97□□□□□ -1.29
SHROOM1Q2M3G4 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
SHROOM1Q2M3G4 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
SHROOM1Q2M3G4 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
SHROOM1Q2M3G4 AL391361.1-201ENST00000405580 489 ntBASIC6.97□□□□□ -1.29
SHROOM1Q2M3G4 LINC02257-201ENST00000412445 605 ntTSL 2 BASIC6.97□□□□□ -1.29
SHROOM1Q2M3G4 TUBB4BP6-201ENST00000437576 479 ntBASIC6.97□□□□□ -1.29
SHROOM1Q2M3G4 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC6.97□□□□□ -1.29
SHROOM1Q2M3G4 AL022319.1-201ENST00000458183 1167 ntBASIC6.97□□□□□ -1.29
SHROOM1Q2M3G4 RN7SL165P-201ENST00000477476 291 ntBASIC6.97□□□□□ -1.29
SHROOM1Q2M3G4 AC068522.1-201ENST00000482895 345 ntBASIC6.97□□□□□ -1.29
SHROOM1Q2M3G4 UBA52P7-201ENST00000486088 380 ntBASIC6.97□□□□□ -1.29
SHROOM1Q2M3G4 RPS4XP14-201ENST00000493072 781 ntBASIC6.97□□□□□ -1.29
SHROOM1Q2M3G4 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC6.97□□□□□ -1.29
SHROOM1Q2M3G4 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC6.97□□□□□ -1.29
SHROOM1Q2M3G4 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
SHROOM1Q2M3G4 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC6.97□□□□□ -1.29
SHROOM1Q2M3G4 AP004607.6-201ENST00000525033 1202 ntBASIC6.97□□□□□ -1.29
SHROOM1Q2M3G4 SCAPER-203ENST00000538941 4853 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
SHROOM1Q2M3G4 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC6.97□□□□□ -1.29
SHROOM1Q2M3G4 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC6.97□□□□□ -1.29
SHROOM1Q2M3G4 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC6.97□□□□□ -1.29
SHROOM1Q2M3G4 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC6.97□□□□□ -1.29
SHROOM1Q2M3G4 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC6.97□□□□□ -1.29
SHROOM1Q2M3G4 CGA-206ENST00000630630 832 ntTSL 2 BASIC6.97□□□□□ -1.29
SHROOM1Q2M3G4 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
SHROOM1Q2M3G4 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
SHROOM1Q2M3G4 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC6.97□□□□□ -1.29
SHROOM1Q2M3G4 OLMALINC-203ENST00000641087 3779 ntBASIC6.97□□□□□ -1.29
SHROOM1Q2M3G4 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC6.97□□□□□ -1.29
SHROOM1Q2M3G4 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
SHROOM1Q2M3G4 AL391261.1-201ENST00000555712 1479 ntBASIC6.97□□□□□ -1.29
SHROOM1Q2M3G4 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC6.97□□□□□ -1.29
SHROOM1Q2M3G4 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC6.97□□□□□ -1.29
SHROOM1Q2M3G4 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
SHROOM1Q2M3G4 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
SHROOM1Q2M3G4 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC6.97□□□□□ -1.29
SHROOM1Q2M3G4 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC6.97□□□□□ -1.29
SHROOM1Q2M3G4 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC6.97□□□□□ -1.29
SHROOM1Q2M3G4 NUDT13-206ENST00000537969 2151 ntTSL 2 BASIC6.96□□□□□ -1.29
SHROOM1Q2M3G4 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC6.96□□□□□ -1.29
SHROOM1Q2M3G4 AC008040.1-202ENST00000483289 6251 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
SHROOM1Q2M3G4 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC6.96□□□□□ -1.29
SHROOM1Q2M3G4 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC6.96□□□□□ -1.29
SHROOM1Q2M3G4 TEK-202ENST00000406359 3935 ntTSL 2 BASIC6.96□□□□□ -1.3
SHROOM1Q2M3G4 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.3
SHROOM1Q2M3G4 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC6.96□□□□□ -1.3
SHROOM1Q2M3G4 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
SHROOM1Q2M3G4 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC6.96□□□□□ -1.3
SHROOM1Q2M3G4 CYCSP51-201ENST00000443545 318 ntBASIC6.96□□□□□ -1.3
SHROOM1Q2M3G4 EEF1B2P6-201ENST00000445713 673 ntBASIC6.96□□□□□ -1.3
SHROOM1Q2M3G4 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC6.96□□□□□ -1.3
SHROOM1Q2M3G4 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC6.96□□□□□ -1.3
SHROOM1Q2M3G4 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC6.96□□□□□ -1.3
SHROOM1Q2M3G4 AC083795.1-201ENST00000491760 320 ntBASIC6.96□□□□□ -1.3
SHROOM1Q2M3G4 TPM3P3-201ENST00000521343 354 ntBASIC6.96□□□□□ -1.3
SHROOM1Q2M3G4 HMGN2P36-201ENST00000529541 409 ntBASIC6.96□□□□□ -1.3
SHROOM1Q2M3G4 AC108449.2-201ENST00000560865 552 ntTSL 3 BASIC6.96□□□□□ -1.3
SHROOM1Q2M3G4 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
SHROOM1Q2M3G4 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
SHROOM1Q2M3G4 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
SHROOM1Q2M3G4 MIR3176-201ENST00000582210 90 ntBASIC6.96□□□□□ -1.3
SHROOM1Q2M3G4 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.3
SHROOM1Q2M3G4 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC6.96□□□□□ -1.3
SHROOM1Q2M3G4 AC104695.2-201ENST00000605056 775 ntBASIC6.96□□□□□ -1.3
SHROOM1Q2M3G4 AL034374.2-201ENST00000605281 548 ntBASIC6.96□□□□□ -1.3
SHROOM1Q2M3G4 AC005899.7-201ENST00000618199 588 ntBASIC6.96□□□□□ -1.3
SHROOM1Q2M3G4 TCL6_3.1-201ENST00000619064 137 ntBASIC6.96□□□□□ -1.3
SHROOM1Q2M3G4 GPATCH2-202ENST00000366935 5851 ntAPPRIS P1 TSL 2 BASIC6.96□□□□□ -1.3
SHROOM1Q2M3G4 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC6.96□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 83.6 ms