Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
RFX7Q2KHR2 JAKMIP2-205ENST00000507386 5915 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
RFX7Q2KHR2 CR1-203ENST00000367051 7469 ntTSL 5 BASIC7.19□□□□□ -1.26
RFX7Q2KHR2 ZNF81-204ENST00000376954 7933 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
RFX7Q2KHR2 AC005725.1-201ENST00000577346 2607 ntBASIC7.18□□□□□ -1.26
RFX7Q2KHR2 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC7.18□□□□□ -1.26
RFX7Q2KHR2 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
RFX7Q2KHR2 CIR1P2-201ENST00000514821 1342 ntBASIC7.18□□□□□ -1.26
RFX7Q2KHR2 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC7.18□□□□□ -1.26
RFX7Q2KHR2 MCTP2-201ENST00000357742 7555 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
RFX7Q2KHR2 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC7.18□□□□□ -1.26
RFX7Q2KHR2 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC7.18□□□□□ -1.26
RFX7Q2KHR2 SGCD-202ENST00000435422 9755 ntAPPRIS ALT1 TSL 1 (best) BASIC7.18□□□□□ -1.26
RFX7Q2KHR2 ZNF148-201ENST00000360647 9651 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
RFX7Q2KHR2 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
RFX7Q2KHR2 SPTA1-201ENST00000368147 7999 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
RFX7Q2KHR2 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
RFX7Q2KHR2 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
RFX7Q2KHR2 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
RFX7Q2KHR2 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
RFX7Q2KHR2 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
RFX7Q2KHR2 RN7SKP77-201ENST00000363261 353 ntBASIC7.18□□□□□ -1.26
RFX7Q2KHR2 ZSCAN12P1-201ENST00000406489 419 ntBASIC7.18□□□□□ -1.26
RFX7Q2KHR2 EEF1B2P8-201ENST00000414101 671 ntBASIC7.18□□□□□ -1.26
RFX7Q2KHR2 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC7.18□□□□□ -1.26
RFX7Q2KHR2 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC7.18□□□□□ -1.26
RFX7Q2KHR2 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC7.18□□□□□ -1.26
RFX7Q2KHR2 ACA64.4-201ENST00000459070 127 ntBASIC7.18□□□□□ -1.26
RFX7Q2KHR2 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC7.18□□□□□ -1.26
RFX7Q2KHR2 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC7.18□□□□□ -1.26
RFX7Q2KHR2 RN7SKP67-201ENST00000515905 235 ntBASIC7.18□□□□□ -1.26
RFX7Q2KHR2 RNA5SP362-201ENST00000516048 118 ntBASIC7.18□□□□□ -1.26
RFX7Q2KHR2 RN7SKP288-201ENST00000516227 268 ntBASIC7.18□□□□□ -1.26
RFX7Q2KHR2 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC7.18□□□□□ -1.26
RFX7Q2KHR2 OR4A6P-201ENST00000534364 970 ntBASIC7.18□□□□□ -1.26
RFX7Q2KHR2 AC090424.1-201ENST00000535243 736 ntBASIC7.18□□□□□ -1.26
RFX7Q2KHR2 AC090022.1-201ENST00000546569 311 ntBASIC7.18□□□□□ -1.26
RFX7Q2KHR2 GNG2-208ENST00000554875 430 ntTSL 5 BASIC7.18□□□□□ -1.26
RFX7Q2KHR2 AC009063.2-203ENST00000567860 745 ntTSL 2 BASIC7.18□□□□□ -1.26
RFX7Q2KHR2 MRO-208ENST00000588444 866 ntTSL 3 BASIC7.18□□□□□ -1.26
RFX7Q2KHR2 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC7.18□□□□□ -1.26
RFX7Q2KHR2 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC7.18□□□□□ -1.26
RFX7Q2KHR2 AL352984.2-201ENST00000611153 546 ntBASIC7.18□□□□□ -1.26
RFX7Q2KHR2 AL021918.2-201ENST00000613415 194 ntBASIC7.18□□□□□ -1.26
RFX7Q2KHR2 AL445670.1-201ENST00000618889 801 ntBASIC7.18□□□□□ -1.26
RFX7Q2KHR2 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC7.18□□□□□ -1.26
RFX7Q2KHR2 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC7.18□□□□□ -1.26
RFX7Q2KHR2 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC7.18□□□□□ -1.26
RFX7Q2KHR2 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
RFX7Q2KHR2 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
RFX7Q2KHR2 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC7.18□□□□□ -1.26
RFX7Q2KHR2 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
RFX7Q2KHR2 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC7.18□□□□□ -1.26
RFX7Q2KHR2 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC7.17□□□□□ -1.26
RFX7Q2KHR2 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC7.17□□□□□ -1.26
RFX7Q2KHR2 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
RFX7Q2KHR2 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC7.17□□□□□ -1.26
RFX7Q2KHR2 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC7.17□□□□□ -1.26
RFX7Q2KHR2 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC7.17□□□□□ -1.26
RFX7Q2KHR2 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
RFX7Q2KHR2 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
RFX7Q2KHR2 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
RFX7Q2KHR2 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
RFX7Q2KHR2 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC7.17□□□□□ -1.26
RFX7Q2KHR2 RPS4XP5-201ENST00000419038 768 ntBASIC7.17□□□□□ -1.26
RFX7Q2KHR2 USP24P1-201ENST00000433802 779 ntBASIC7.17□□□□□ -1.26
RFX7Q2KHR2 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC7.17□□□□□ -1.26
RFX7Q2KHR2 RPS12P17-201ENST00000438591 377 ntBASIC7.17□□□□□ -1.26
RFX7Q2KHR2 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
RFX7Q2KHR2 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC7.17□□□□□ -1.26
RFX7Q2KHR2 RPS27AP2-201ENST00000457576 465 ntBASIC7.17□□□□□ -1.26
RFX7Q2KHR2 AC093166.4-201ENST00000457867 318 ntBASIC7.17□□□□□ -1.26
RFX7Q2KHR2 AL157777.1-201ENST00000468100 304 ntBASIC7.17□□□□□ -1.26
RFX7Q2KHR2 RN7SL717P-201ENST00000478343 297 ntBASIC7.17□□□□□ -1.26
RFX7Q2KHR2 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC7.17□□□□□ -1.26
RFX7Q2KHR2 AL121594.2-201ENST00000541658 472 ntBASIC7.17□□□□□ -1.26
RFX7Q2KHR2 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC7.17□□□□□ -1.26
RFX7Q2KHR2 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
RFX7Q2KHR2 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
RFX7Q2KHR2 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC7.17□□□□□ -1.26
RFX7Q2KHR2 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC7.17□□□□□ -1.26
RFX7Q2KHR2 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC7.17□□□□□ -1.26
RFX7Q2KHR2 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC7.17□□□□□ -1.26
RFX7Q2KHR2 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC7.16□□□□□ -1.26
RFX7Q2KHR2 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC7.16□□□□□ -1.26
RFX7Q2KHR2 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
RFX7Q2KHR2 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC7.16□□□□□ -1.26
RFX7Q2KHR2 LINC01793-201ENST00000409590 2036 ntTSL 2 BASIC7.16□□□□□ -1.26
RFX7Q2KHR2 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
RFX7Q2KHR2 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
RFX7Q2KHR2 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
RFX7Q2KHR2 DCHS2-207ENST00000623607 8912 ntAPPRIS P2 TSL 1 (best) BASIC7.16□□□□□ -1.26
RFX7Q2KHR2 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC7.16□□□□□ -1.26
RFX7Q2KHR2 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC7.16□□□□□ -1.26
RFX7Q2KHR2 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC7.16□□□□□ -1.26
RFX7Q2KHR2 PHLPP2-201ENST00000393524 8467 ntTSL 2 BASIC7.16□□□□□ -1.26
RFX7Q2KHR2 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
RFX7Q2KHR2 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
RFX7Q2KHR2 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC7.16□□□□□ -1.26
RFX7Q2KHR2 GNG5P2-201ENST00000372054 207 ntBASIC7.16□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms