Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 AC002127.1-201ENST00000421305 225 ntBASIC5.61□□□□□ -1.51
CDH11P55287 OSTCP4-201ENST00000424397 449 ntBASIC5.61□□□□□ -1.51
CDH11P55287 PLA2G12AP2-201ENST00000424744 264 ntBASIC5.61□□□□□ -1.51
CDH11P55287 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC5.61□□□□□ -1.51
CDH11P55287 AC099782.1-201ENST00000425889 474 ntBASIC5.61□□□□□ -1.51
CDH11P55287 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC5.61□□□□□ -1.51
CDH11P55287 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC5.61□□□□□ -1.51
CDH11P55287 RPL12P16-201ENST00000431098 498 ntBASIC5.61□□□□□ -1.51
CDH11P55287 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC5.61□□□□□ -1.51
CDH11P55287 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC5.61□□□□□ -1.51
CDH11P55287 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC5.61□□□□□ -1.51
CDH11P55287 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
CDH11P55287 RPSAP40-201ENST00000442343 891 ntBASIC5.61□□□□□ -1.51
CDH11P55287 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC5.61□□□□□ -1.51
CDH11P55287 AL359955.1-201ENST00000455242 3275 ntBASIC5.61□□□□□ -1.51
CDH11P55287 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
CDH11P55287 RN7SL714P-201ENST00000487050 298 ntBASIC5.61□□□□□ -1.51
CDH11P55287 AC021006.1-201ENST00000489849 553 ntBASIC5.61□□□□□ -1.51
CDH11P55287 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC5.61□□□□□ -1.51
CDH11P55287 AGGF1P3-201ENST00000493675 1213 ntBASIC5.61□□□□□ -1.51
CDH11P55287 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC5.61□□□□□ -1.51
CDH11P55287 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC5.61□□□□□ -1.51
CDH11P55287 MAST4-IT1-201ENST00000514241 658 ntBASIC5.61□□□□□ -1.51
CDH11P55287 RNA5SP418-201ENST00000515951 117 ntBASIC5.61□□□□□ -1.51
CDH11P55287 IGKV2-19-201ENST00000518132 283 ntBASIC5.61□□□□□ -1.51
CDH11P55287 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CDH11P55287 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC5.61□□□□□ -1.51
CDH11P55287 NPIPB14P-203ENST00000532298 987 ntBASIC5.61□□□□□ -1.51
CDH11P55287 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC5.61□□□□□ -1.51
CDH11P55287 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC5.61□□□□□ -1.51
CDH11P55287 TPRX1P1-201ENST00000557620 319 ntBASIC5.61□□□□□ -1.51
CDH11P55287 AC023968.1-201ENST00000560719 475 ntBASIC5.61□□□□□ -1.51
CDH11P55287 AC026898.1-201ENST00000586404 571 ntBASIC5.61□□□□□ -1.51
CDH11P55287 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CDH11P55287 IGKV2OR2-1-201ENST00000605129 304 ntBASIC5.61□□□□□ -1.51
CDH11P55287 AC097641.3-201ENST00000613523 464 ntBASIC5.61□□□□□ -1.51
CDH11P55287 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC5.61□□□□□ -1.51
CDH11P55287 MIR6721-201ENST00000617181 87 ntBASIC5.61□□□□□ -1.51
CDH11P55287 MIR6811-201ENST00000620409 58 ntBASIC5.61□□□□□ -1.51
CDH11P55287 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
CDH11P55287 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC5.61□□□□□ -1.51
CDH11P55287 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
CDH11P55287 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
CDH11P55287 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
CDH11P55287 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CDH11P55287 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
CDH11P55287 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CDH11P55287 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC5.6□□□□□ -1.51
CDH11P55287 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.6□□□□□ -1.51
CDH11P55287 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC5.6□□□□□ -1.51
CDH11P55287 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC5.6□□□□□ -1.51
CDH11P55287 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CDH11P55287 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC5.6□□□□□ -1.51
CDH11P55287 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC5.6□□□□□ -1.51
CDH11P55287 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
CDH11P55287 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.6□□□□□ -1.51
CDH11P55287 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
CDH11P55287 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC5.6□□□□□ -1.51
CDH11P55287 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC5.6□□□□□ -1.51
CDH11P55287 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC5.6□□□□□ -1.51
CDH11P55287 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC5.6□□□□□ -1.51
CDH11P55287 IGLV3-4-201ENST00000432300 244 ntBASIC5.6□□□□□ -1.51
CDH11P55287 RSL24D1P8-201ENST00000434442 492 ntBASIC5.6□□□□□ -1.51
CDH11P55287 AL731534.1-201ENST00000434711 269 ntBASIC5.6□□□□□ -1.51
CDH11P55287 GAPDHP59-201ENST00000435908 267 ntBASIC5.6□□□□□ -1.51
CDH11P55287 AC016908.1-201ENST00000442571 1219 ntBASIC5.6□□□□□ -1.51
CDH11P55287 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
CDH11P55287 RPL5P10-201ENST00000445207 894 ntBASIC5.6□□□□□ -1.51
CDH11P55287 NDUFA5P8-201ENST00000449019 346 ntBASIC5.6□□□□□ -1.51
CDH11P55287 MTND2P3-201ENST00000452458 470 ntBASIC5.6□□□□□ -1.51
CDH11P55287 MTCYBP14-201ENST00000457471 715 ntBASIC5.6□□□□□ -1.51
CDH11P55287 RARRES2P3-201ENST00000457739 473 ntBASIC5.6□□□□□ -1.51
CDH11P55287 AC073594.1-201ENST00000462065 364 ntBASIC5.6□□□□□ -1.51
CDH11P55287 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC5.6□□□□□ -1.51
CDH11P55287 GM2AP2-201ENST00000491764 562 ntBASIC5.6□□□□□ -1.51
CDH11P55287 CSNK1A1P3-201ENST00000504105 330 ntBASIC5.6□□□□□ -1.51
CDH11P55287 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC5.6□□□□□ -1.51
CDH11P55287 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC5.6□□□□□ -1.51
CDH11P55287 AL133399.1-201ENST00000527476 298 ntBASIC5.6□□□□□ -1.51
CDH11P55287 HNRNPRP2-201ENST00000528421 743 ntBASIC5.6□□□□□ -1.51
CDH11P55287 AC130364.2-201ENST00000528639 604 ntBASIC5.6□□□□□ -1.51
CDH11P55287 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC5.6□□□□□ -1.51
CDH11P55287 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC5.6□□□□□ -1.51
CDH11P55287 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC5.6□□□□□ -1.51
CDH11P55287 AC067805.1-201ENST00000559344 470 ntBASIC5.6□□□□□ -1.51
CDH11P55287 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC5.6□□□□□ -1.51
CDH11P55287 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC5.6□□□□□ -1.51
CDH11P55287 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
CDH11P55287 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC5.6□□□□□ -1.51
CDH11P55287 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC5.6□□□□□ -1.51
CDH11P55287 AC020916.2-201ENST00000591242 360 ntBASIC5.6□□□□□ -1.51
CDH11P55287 AC073046.2-201ENST00000604756 527 ntBASIC5.6□□□□□ -1.51
CDH11P55287 AC091167.5-201ENST00000605689 894 ntBASIC5.6□□□□□ -1.51
CDH11P55287 BX322635.1-201ENST00000605804 496 ntBASIC5.6□□□□□ -1.51
CDH11P55287 AC012467.1-201ENST00000607740 256 ntBASIC5.6□□□□□ -1.51
CDH11P55287 AL135999.3-201ENST00000610501 812 ntBASIC5.6□□□□□ -1.51
CDH11P55287 uc_338.31-201ENST00000615595 186 ntBASIC5.6□□□□□ -1.51
CDH11P55287 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC5.6□□□□□ -1.51
CDH11P55287 PSMD10P2-203ENST00000627340 914 ntTSL 5 BASIC5.6□□□□□ -1.51
CDH11P55287 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 138.9 ms