Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC6.68□□□□□ -1.34
GPC3P51654 RPL7L1P3-201ENST00000455249 689 ntBASIC6.68□□□□□ -1.34
GPC3P51654 RN7SL269P-201ENST00000467795 305 ntBASIC6.68□□□□□ -1.34
GPC3P51654 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC6.68□□□□□ -1.34
GPC3P51654 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC6.68□□□□□ -1.34
GPC3P51654 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC6.68□□□□□ -1.34
GPC3P51654 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC6.68□□□□□ -1.34
GPC3P51654 AC008521.2-201ENST00000591021 259 ntBASIC6.68□□□□□ -1.34
GPC3P51654 AL117336.3-201ENST00000603160 1107 ntTSL 3 BASIC6.68□□□□□ -1.34
GPC3P51654 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC6.68□□□□□ -1.34
GPC3P51654 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC6.68□□□□□ -1.34
GPC3P51654 MIR6862-1-201ENST00000613016 70 ntBASIC6.68□□□□□ -1.34
GPC3P51654 MIR6862-2-201ENST00000614755 70 ntBASIC6.68□□□□□ -1.34
GPC3P51654 AL512356.3-201ENST00000623005 461 ntBASIC6.68□□□□□ -1.34
GPC3P51654 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC6.68□□□□□ -1.34
GPC3P51654 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC6.68□□□□□ -1.34
GPC3P51654 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC6.68□□□□□ -1.34
GPC3P51654 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC6.68□□□□□ -1.34
GPC3P51654 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC6.68□□□□□ -1.34
GPC3P51654 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC6.68□□□□□ -1.34
GPC3P51654 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
GPC3P51654 HSPD1P8-201ENST00000400121 1658 ntBASIC6.68□□□□□ -1.34
GPC3P51654 ING3-204ENST00000431467 1447 ntTSL 2 BASIC6.67□□□□□ -1.34
GPC3P51654 RBPJP7-201ENST00000442803 1447 ntBASIC6.67□□□□□ -1.34
GPC3P51654 RBPJP5-201ENST00000449433 1447 ntBASIC6.67□□□□□ -1.34
GPC3P51654 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
GPC3P51654 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
GPC3P51654 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
GPC3P51654 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
GPC3P51654 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC6.67□□□□□ -1.34
GPC3P51654 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC6.67□□□□□ -1.34
GPC3P51654 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
GPC3P51654 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC6.67□□□□□ -1.34
GPC3P51654 RNU1-150P-201ENST00000362491 162 ntBASIC6.67□□□□□ -1.34
GPC3P51654 RN7SKP78-201ENST00000364711 318 ntBASIC6.67□□□□□ -1.34
GPC3P51654 MIR1203-201ENST00000408812 85 ntBASIC6.67□□□□□ -1.34
GPC3P51654 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC6.67□□□□□ -1.34
GPC3P51654 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC6.67□□□□□ -1.34
GPC3P51654 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC6.67□□□□□ -1.34
GPC3P51654 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC6.67□□□□□ -1.34
GPC3P51654 AC104843.2-201ENST00000427666 297 ntBASIC6.67□□□□□ -1.34
GPC3P51654 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC6.67□□□□□ -1.34
GPC3P51654 RPL23AP19-201ENST00000436229 369 ntBASIC6.67□□□□□ -1.34
GPC3P51654 PCBP2P1-201ENST00000437262 977 ntBASIC6.67□□□□□ -1.34
GPC3P51654 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC6.67□□□□□ -1.34
GPC3P51654 GEMIN2P1-201ENST00000454246 752 ntBASIC6.67□□□□□ -1.34
GPC3P51654 AC011476.1-201ENST00000466725 307 ntBASIC6.67□□□□□ -1.34
GPC3P51654 AC114728.1-201ENST00000488289 483 ntBASIC6.67□□□□□ -1.34
GPC3P51654 PSMA2P2-201ENST00000504319 686 ntBASIC6.67□□□□□ -1.34
GPC3P51654 SNORD46.2-201ENST00000516021 102 ntBASIC6.67□□□□□ -1.34
GPC3P51654 IGLVIV-64-201ENST00000518581 301 ntBASIC6.67□□□□□ -1.34
GPC3P51654 AC022826.1-201ENST00000519383 805 ntBASIC6.67□□□□□ -1.34
GPC3P51654 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC6.67□□□□□ -1.34
GPC3P51654 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC6.67□□□□□ -1.34
GPC3P51654 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
GPC3P51654 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC6.67□□□□□ -1.34
GPC3P51654 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC6.67□□□□□ -1.34
GPC3P51654 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC6.67□□□□□ -1.34
GPC3P51654 AC020916.2-201ENST00000591242 360 ntBASIC6.67□□□□□ -1.34
GPC3P51654 AC027334.1-201ENST00000603257 310 ntBASIC6.67□□□□□ -1.34
GPC3P51654 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC6.67□□□□□ -1.34
GPC3P51654 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC6.67□□□□□ -1.34
GPC3P51654 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC6.67□□□□□ -1.34
GPC3P51654 5S_rRNA.28-201ENST00000638107 119 ntBASIC6.67□□□□□ -1.34
GPC3P51654 AL022323.4-201ENST00000623980 13120 ntBASIC6.67□□□□□ -1.34
GPC3P51654 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC6.67□□□□□ -1.34
GPC3P51654 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
GPC3P51654 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC6.67□□□□□ -1.34
GPC3P51654 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC6.67□□□□□ -1.34
GPC3P51654 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC6.67□□□□□ -1.34
GPC3P51654 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
GPC3P51654 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC6.66□□□□□ -1.34
GPC3P51654 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
GPC3P51654 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC6.66□□□□□ -1.34
GPC3P51654 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC6.66□□□□□ -1.34
GPC3P51654 AC092724.1-201ENST00000624623 3397 ntBASIC6.66□□□□□ -1.34
GPC3P51654 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
GPC3P51654 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
GPC3P51654 AL031985.1-201ENST00000392713 418 ntBASIC6.66□□□□□ -1.34
GPC3P51654 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC6.66□□□□□ -1.34
GPC3P51654 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC6.66□□□□□ -1.34
GPC3P51654 NME1P1-201ENST00000420914 382 ntBASIC6.66□□□□□ -1.34
GPC3P51654 HNRNPA1P18-201ENST00000433537 927 ntBASIC6.66□□□□□ -1.34
GPC3P51654 AC112187.1-201ENST00000455837 479 ntBASIC6.66□□□□□ -1.34
GPC3P51654 SETP20-201ENST00000457046 852 ntBASIC6.66□□□□□ -1.34
GPC3P51654 AC007998.1-201ENST00000474156 672 ntBASIC6.66□□□□□ -1.34
GPC3P51654 RPL7P51-201ENST00000490532 749 ntBASIC6.66□□□□□ -1.34
GPC3P51654 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
GPC3P51654 CYP4F27P-201ENST00000514557 494 ntBASIC6.66□□□□□ -1.34
GPC3P51654 SETP21-201ENST00000514799 892 ntBASIC6.66□□□□□ -1.34
GPC3P51654 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC6.66□□□□□ -1.34
GPC3P51654 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
GPC3P51654 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC6.66□□□□□ -1.34
GPC3P51654 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC6.66□□□□□ -1.34
GPC3P51654 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC6.66□□□□□ -1.34
GPC3P51654 AC092121.1-201ENST00000569452 202 ntBASIC6.66□□□□□ -1.34
GPC3P51654 AL136131.3-201ENST00000607600 188 ntBASIC6.66□□□□□ -1.34
GPC3P51654 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC6.66□□□□□ -1.34
GPC3P51654 UOX-205ENST00000640983 544 ntTSL 4 BASIC6.66□□□□□ -1.34
GPC3P51654 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 93.6 ms