Protein–RNA interactions for Protein: P51532

SMARCA4, Transcription activator BRG1, humanhuman

Predictions only

Length 1,647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4P51532 DAZ3-202ENST00000382365 3503 ntAPPRIS P5 TSL 1 (best) BASIC10.21□□□□□ -0.78
SMARCA4P51532 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC10.21□□□□□ -0.78
SMARCA4P51532 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
SMARCA4P51532 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC10.2□□□□□ -0.78
SMARCA4P51532 TBC1D32-201ENST00000275159 4431 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
SMARCA4P51532 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC10.2□□□□□ -0.78
SMARCA4P51532 RNA5SP333-201ENST00000363466 118 ntBASIC10.2□□□□□ -0.78
SMARCA4P51532 RNA5SP334-201ENST00000364825 118 ntBASIC10.2□□□□□ -0.78
SMARCA4P51532 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC10.2□□□□□ -0.78
SMARCA4P51532 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC10.2□□□□□ -0.78
SMARCA4P51532 IGLV3-24-201ENST00000517477 197 ntBASIC10.2□□□□□ -0.78
SMARCA4P51532 AL049779.3-201ENST00000557141 606 ntBASIC10.2□□□□□ -0.78
SMARCA4P51532 RPL10P14-201ENST00000565265 298 ntBASIC10.2□□□□□ -0.78
SMARCA4P51532 AC011840.5-201ENST00000582125 771 ntBASIC10.2□□□□□ -0.78
SMARCA4P51532 AC100827.5-201ENST00000615883 426 ntBASIC10.2□□□□□ -0.78
SMARCA4P51532 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC10.2□□□□□ -0.78
SMARCA4P51532 DOCK2-211ENST00000520908 4654 ntTSL 2 BASIC10.2□□□□□ -0.78
SMARCA4P51532 HSPA8P18-201ENST00000439846 1928 ntBASIC10.2□□□□□ -0.78
SMARCA4P51532 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
SMARCA4P51532 AC006213.6-201ENST00000623722 4179 ntBASIC10.2□□□□□ -0.78
SMARCA4P51532 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC10.2□□□□□ -0.78
SMARCA4P51532 Z99129.3-201ENST00000624363 6430 ntTSL 2 BASIC10.19□□□□□ -0.78
SMARCA4P51532 ATR-201ENST00000350721 8249 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
SMARCA4P51532 STON2-206ENST00000555447 4302 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
SMARCA4P51532 SUN3-203ENST00000412142 1448 ntTSL 5 BASIC10.19□□□□□ -0.78
SMARCA4P51532 ZNF778-207ENST00000620195 11031 ntAPPRIS P3 TSL 2 BASIC10.19□□□□□ -0.78
SMARCA4P51532 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
SMARCA4P51532 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC10.19□□□□□ -0.78
SMARCA4P51532 DNAJB5P1-201ENST00000454004 806 ntBASIC10.19□□□□□ -0.78
SMARCA4P51532 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC10.19□□□□□ -0.78
SMARCA4P51532 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC10.19□□□□□ -0.78
SMARCA4P51532 RN7SL447P-201ENST00000494711 245 ntBASIC10.19□□□□□ -0.78
SMARCA4P51532 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC10.19□□□□□ -0.78
SMARCA4P51532 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC10.19□□□□□ -0.78
SMARCA4P51532 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC10.19□□□□□ -0.78
SMARCA4P51532 CASC22-201ENST00000569713 386 ntTSL 5 BASIC10.19□□□□□ -0.78
SMARCA4P51532 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC10.19□□□□□ -0.78
SMARCA4P51532 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
SMARCA4P51532 AP000550.3-201ENST00000637734 379 ntBASIC10.19□□□□□ -0.78
SMARCA4P51532 GRIA4-212ENST00000530497 5059 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
SMARCA4P51532 FOXJ3-205ENST00000372573 5309 ntAPPRIS P3 TSL 2 BASIC10.19□□□□□ -0.78
SMARCA4P51532 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
SMARCA4P51532 CSDE1-218ENST00000610726 4312 ntTSL 5 BASIC10.19□□□□□ -0.78
SMARCA4P51532 LINC01903-201ENST00000580659 2149 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
SMARCA4P51532 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
SMARCA4P51532 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
SMARCA4P51532 AL139128.1-201ENST00000413921 941 ntBASIC10.18□□□□□ -0.78
SMARCA4P51532 AL133325.1-201ENST00000421090 382 ntBASIC10.18□□□□□ -0.78
SMARCA4P51532 RBMY2QP-201ENST00000429799 1147 ntBASIC10.18□□□□□ -0.78
SMARCA4P51532 BMPR1APS2-201ENST00000527904 1012 ntBASIC10.18□□□□□ -0.78
SMARCA4P51532 AC078878.1-201ENST00000539832 958 ntBASIC10.18□□□□□ -0.78
SMARCA4P51532 AC012557.1-201ENST00000607115 611 ntBASIC10.18□□□□□ -0.78
SMARCA4P51532 MYOF-201ENST00000358334 6680 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
SMARCA4P51532 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
SMARCA4P51532 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
SMARCA4P51532 FAM168A-201ENST00000064778 7296 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
SMARCA4P51532 AFAP1-AS1-201ENST00000608442 6795 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
SMARCA4P51532 NRCAM-204ENST00000379028 6685 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
SMARCA4P51532 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC10.18□□□□□ -0.78
SMARCA4P51532 CTNND1-234ENST00000532844 6012 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
SMARCA4P51532 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
SMARCA4P51532 AP2B1-215ENST00000616681 3267 ntTSL 2 BASIC10.18□□□□□ -0.78
SMARCA4P51532 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
SMARCA4P51532 AL133243.4-201ENST00000623116 3109 ntBASIC10.18□□□□□ -0.78
SMARCA4P51532 MAVS-201ENST00000416600 11596 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
SMARCA4P51532 EPN1-202ENST00000270460 16219 ntAPPRIS P1 TSL 2 BASIC10.18□□□□□ -0.78
SMARCA4P51532 RNA5SP305-201ENST00000362665 119 ntBASIC10.18□□□□□ -0.78
SMARCA4P51532 AC068522.1-201ENST00000482895 345 ntBASIC10.18□□□□□ -0.78
SMARCA4P51532 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
SMARCA4P51532 AC109583.2-201ENST00000617367 129 ntBASIC10.18□□□□□ -0.78
SMARCA4P51532 AP002799.1-201ENST00000623552 423 ntBASIC10.18□□□□□ -0.78
SMARCA4P51532 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC10.18□□□□□ -0.78
SMARCA4P51532 MYLK4-201ENST00000274643 5806 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
SMARCA4P51532 MFSD4BP1-201ENST00000513330 1552 ntBASIC10.18□□□□□ -0.78
SMARCA4P51532 NEK11-201ENST00000356918 1874 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
SMARCA4P51532 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
SMARCA4P51532 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC10.17□□□□□ -0.78
SMARCA4P51532 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
SMARCA4P51532 AL357153.1-201ENST00000500016 2941 ntTSL 2 BASIC10.17□□□□□ -0.78
SMARCA4P51532 SORBS1-203ENST00000354106 3015 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
SMARCA4P51532 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
SMARCA4P51532 RPL7L1P3-201ENST00000455249 689 ntBASIC10.17□□□□□ -0.78
SMARCA4P51532 AL672167.3-201ENST00000465951 960 ntBASIC10.17□□□□□ -0.78
SMARCA4P51532 RNU6-941P-201ENST00000516346 108 ntBASIC10.17□□□□□ -0.78
SMARCA4P51532 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC10.17□□□□□ -0.78
SMARCA4P51532 AC020765.1-201ENST00000604296 328 ntBASIC10.17□□□□□ -0.78
SMARCA4P51532 uc_338.18-201ENST00000615451 175 ntBASIC10.17□□□□□ -0.78
SMARCA4P51532 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC10.17□□□□□ -0.78
SMARCA4P51532 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC10.17□□□□□ -0.78
SMARCA4P51532 OR2G6-203ENST00000641804 6084 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
SMARCA4P51532 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
SMARCA4P51532 AC131971.1-201ENST00000332881 1482 ntBASIC10.17□□□□□ -0.78
SMARCA4P51532 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
SMARCA4P51532 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
SMARCA4P51532 OR2T33-202ENST00000641220 4118 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
SMARCA4P51532 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
SMARCA4P51532 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
SMARCA4P51532 MAP2-207ENST00000447185 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
SMARCA4P51532 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC10.16□□□□□ -0.78
SMARCA4P51532 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms